Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G1207 Trochodendron aralioides HOM05D000261 ORTHO05D001168 1.0e-114 416.8 208 100.0
TAR371G1242 Trochodendron aralioides HOM05D000261 ORTHO05D001168 1.9e-65 253.1 195 72.8
TAR629G2210 Trochodendron aralioides HOM05D000261 ORTHO05D001168 1.0e-55 220.7 195 62.6
Dinv09812 Davidia involucrata HOM05D000261 ORTHO05D001168 1.5e-41 173.7 193 51.8
vmacro17666 Vaccinium macrocarpon HOM05D000261 ORTHO05D001168 5.2e-39 165.2 198 47.5
Actinidia39821 Actinidia chinensis HOM05D000261 ORTHO05D001168 2.4e-36 156.4 197 48.7
Nn4g23794 Nelumbo nucifera HOM05D000261 ORTHO05D001168 2.7e-35 152.9 203 45.8
Hma1.2p1_1001F.1_g246540 Hydrangea macrophylla HOM05D000261 ORTHO05D001168 1.1e-31 141.0 198 43.9
Lj2g0020668 Lotus japonicus HOM05D000261 ORTHO05D001168 2.6e-30 136.3 196 45.9
CSS0028962 Camellia sinensis var. sinensis HOM05D000261 ORTHO05D001168 5.8e-30 135.2 209 43.1
Duzib205G0941 Durio zibethinus HOM05D000261 ORTHO05D001168 3.8e-29 132.5 191 48.2
Haze_18655 Corylus avellana HOM05D000261 ORTHO05D001168 4.9e-29 132.1 193 43.5
Duzib068G0905 Durio zibethinus HOM05D000261 ORTHO05D001168 6.4e-29 131.7 193 47.7
Manes.05G138500 Manihot esculenta HOM05D000261 ORTHO05D001168 2.4e-28 129.8 194 44.3
Gohir.D11G005000 Gossypium hirsutum HOM05D000261 ORTHO05D001168 3.2e-28 129.4 191 45.0
Gorai.007G006200 Gossypium raimondii HOM05D000261 ORTHO05D001168 3.2e-28 129.4 191 45.0
Gohir.A11G005900 Gossypium hirsutum HOM05D000261 ORTHO05D001168 4.2e-28 129.0 206 43.7
Cpa.g.sc13.8 Carica papaya HOM05D000261 ORTHO05D001168 5.4e-28 128.6 200 45.5
Potri.015G053300 Populus trichocarpa HOM05D000261 ORTHO05D001168 5.4e-28 128.6 200 44.0
Cfa019794 Carpinus fangiana HOM05D000261 ORTHO05D001168 2.7e-27 126.3 186 41.4
PGR044G0408 Punica granatum HOM05D000261 ORTHO05D001168 3.5e-27 125.9 200 41.5
Thecc.03G033100 Theobroma cacao HOM05D000261 ORTHO05D001168 3.5e-27 125.9 192 44.8
Eucgr.K02213 Eucalyptus grandis HOM05D000261 ORTHO05D001168 4.6e-27 125.6 197 41.6
PSO063G6351 Papaver somniferum HOM05D000261 ORTHO05D001168 4.6e-27 125.6 194 41.8
Atru.chr9.807 Acer truncatum HOM05D000261 ORTHO05D001168 6.0e-27 125.2 207 41.1
Ciclev10019473m.g Citrus clementina HOM05D000261 ORTHO05D001168 7.8e-27 124.8 197 44.2
PSO782G1470 Papaver somniferum HOM05D000261 ORTHO05D001168 1.0e-26 124.4 194 41.2
Glyma.09G185900 Glycine max HOM05D000261 ORTHO05D001168 3.9e-26 122.5 196 43.4
Lj5A147T40 Lonicera japonica HOM05D000261 ORTHO05D001168 3.9e-26 122.5 197 40.6
Glyma.07G090000 Glycine max HOM05D000261 ORTHO05D001168 1.9e-25 120.2 198 41.4
Aqoxy3G03944 Aquilegia oxysepala HOM05D000261 ORTHO05D001168 7.3e-25 118.2 207 42.5
CANSAT80G1989 Cannabis sativa HOM05D000261 ORTHO05D001168 4.7e-24 115.5 210 40.5
CiPaw.16G085400 Carya illinoinensis HOM05D000261 ORTHO05D001168 8.1e-24 114.8 200 40.5
Phvul.004G159200 Phaseolus vulgaris HOM05D000261 ORTHO05D001168 8.1e-24 114.8 195 38.5
Ca_25507_v3 Cicer arietinum L. HOM05D000261 ORTHO05D001168 3.1e-23 112.8 196 41.3
VMungo0464G0021 Vigna mungo HOM05D000261 ORTHO05D001168 3.1e-23 112.8 194 40.2
Nitab4.5_0010801g0010 Nicotiana tabacum HOM05D000261 ORTHO05D001168 5.8e-22 108.6 194 38.7
Cc04_g07260 Coffea canephora HOM05D000261 ORTHO05D001168 7.6e-22 108.2 200 37.5
CAN.G423.2 Capsicum annuum HOM05D000261 ORTHO05D001168 3.8e-21 105.9 204 37.7
Psat1g038960 Pisum sativum HOM05D000261 ORTHO05D001168 1.1e-20 104.4 185 41.1
DCAR_023197 Daucus carota HOM05D000261 ORTHO05D001168 1.4e-20 104.0 209 34.4
Migut.D01464 Erythranthe guttata HOM05D000261 ORTHO05D001168 1.4e-20 104.0 211 37.4
Medtr6g084710 Medicago truncatula HOM05D000261 ORTHO05D001168 1.4e-20 104.0 201 39.8
Sed0007266 Sechium edule HOM05D000261 ORTHO05D001168 2.4e-20 103.2 204 36.3
Lalb_Chr14g0371271 Lupinus albus HOM05D000261 ORTHO05D001168 3.2e-20 102.8 200 40.5
PGSC0003DMG400004069 Solanum tuberosum HOM05D000261 ORTHO05D001168 4.2e-20 102.4 185 36.2
TWI15G0250 Tripterygium wilfordii HOM05D000261 ORTHO05D001168 1.2e-19 100.9 204 37.3
Solyc06g069190.4 Solanum lycopersicum HOM05D000261 ORTHO05D001168 3.5e-19 99.4 196 35.7
Sopen06g026460 Solanum pennellii HOM05D000261 ORTHO05D001168 3.5e-19 99.4 191 35.6
arahy.Tifrunner.gnm1.ann1.TGXT8E Arachis hypogaea HOM05D000261 ORTHO05D001168 4.6e-19 99.0 200 33.5
TPR.G35234 Trifolium pratense HOM05D000261 ORTHO05D001168 4.6e-19 99.0 186 38.7
THA.LOC104820399 Tarenaya hassleriana HOM05D000261 ORTHO05D001168 1.3e-18 97.4 191 38.2
MELO3C002082.2 Cucumis melo HOM05D000261 ORTHO05D001168 1.7e-18 97.1 212 35.4
arahy.Tifrunner.gnm1.ann1.6Q3FKA Arachis hypogaea HOM05D000261 ORTHO05D001168 2.3e-18 96.7 200 33.0
Nitab4.5_0011561g0010 Nicotiana tabacum HOM05D000261 ORTHO05D001168 3.0e-18 96.3 193 37.8
ClCG04G011200 Citrullus lanatus HOM05D000261 ORTHO05D001168 5.1e-18 95.5 213 33.8
Peaxi162Scf00013g00933 Petunia axillaris HOM05D000261 ORTHO05D001168 5.1e-18 95.5 135 46.7
QL10p025000 Quercus lobata HOM05D000261 ORTHO05D001168 8.7e-18 94.7 206 37.4
MSTRG.4554 Avicennia marina HOM05D000261 ORTHO05D001168 1.1e-17 94.4 204 36.3
CsaV3_1G006550 Cucumis sativus L. HOM05D000261 ORTHO05D001168 1.1e-17 94.4 213 35.7
SalBow1G2881 Salvia bowleyana HOM05D000261 ORTHO05D001168 1.5e-17 94.0 195 32.8
AL1G55930 Arabidopsis lyrata HOM05D000261 ORTHO05D001168 5.6e-17 92.0 204 38.2
Carub.0001s3823 Capsella rubella HOM05D000261 ORTHO05D001168 2.1e-16 90.1 197 38.6
Lsat_1_v5_gn_2_12101 Lactuca sativa HOM05D000261 ORTHO05D001168 3.1e-15 86.3 196 36.7
HanXRQChr10g0291991 Helianthus annuus HOM05D000261 ORTHO05D001168 9.0e-15 84.7 197 35.5
ATR0564G218 Amborella trichopoda HOM05D000261 ORTHO05D001168 1.5e-14 84.0 186 31.2
GSVIVG01008267001 Vitis vinifera HOM05D000261 ORTHO05D001168 1.5e-14 84.0 107 46.7
Aa31LG10G4890 Aethionema arabicum HOM05D000261 ORTHO05D001168 3.4e-14 82.8 217 30.9
Sp1g35960 Schrenkiella parvula HOM05D000261 ORTHO05D001168 7.6e-14 81.6 187 33.7
AT1G49050 Arabidopsis thaliana HOM05D000261 ORTHO05D001168 9.9e-14 81.3 197 36.5
CARHR039090 Cardamine hirsuta HOM05D000261 ORTHO05D001168 9.9e-14 81.3 207 34.3
BcaNung06344 Brassica carinata HOM05D000261 ORTHO05D001168 1.3e-13 80.9 188 32.4
BcaC05g27542 Brassica carinata HOM05D000261 ORTHO05D001168 1.7e-13 80.5 199 31.2
C05p35270 Brassica napus HOM05D000261 ORTHO05D001168 1.7e-13 80.5 199 31.2
BolC5t32241H Brassica oleracea HOM05D000261 ORTHO05D001168 1.7e-13 80.5 199 31.2
BcaB02g11295 Brassica carinata HOM05D000261 ORTHO05D001168 2.9e-13 79.7 200 31.5
Thhalv10011346m.g Eutrema salsugineum HOM05D000261 ORTHO05D001168 2.9e-13 79.7 194 35.1
BraA05t20986Z Brassica rapa HOM05D000261 ORTHO05D001168 6.4e-13 78.6 181 33.7
MBI19_g21651_MAGBIO Magnolia biondii HOM05D000261 ORTHO05D001168 1.1e-12 77.8 197 32.0
A05p20800 Brassica napus HOM05D000261 ORTHO05D001168 1.9e-12 77.0 181 33.7
Zm00001eb189980 Zea mays HOM05D000261 ORTHO05D001168 1.6e-11 73.9 201 29.4
SEGI_20069 Sequoiadendron giganteum HOM05D000261 ORTHO05D001168 6.7e-10 68.6 192 31.2
COL.COLO4_04352 Corchorus olitorius HOM05D000261 ORTHO05D001168 2.1e-08 63.5 98 41.8


User provided reference genes

Program Settings