Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G1203 Trochodendron aralioides HOM05D004693 ORTHO05D005545 6.5e-199 697.2 353 100.0
TAR629G3320 Trochodendron aralioides HOM05D004693 ORTHO05D005545 1.5e-99 367.1 217 86.2
GSVIVG01031023001 Vitis vinifera HOM05D004693 ORTHO05D005545 2.3e-95 353.2 235 76.6
Nn4g23871 Nelumbo nucifera HOM05D004693 ORTHO05D005545 8.2e-93 344.7 235 74.0
Potri.004G099500 Populus trichocarpa HOM05D004693 ORTHO05D005545 5.5e-89 332.0 238 69.7
Hma1.2p1_1109F.1_g257990 Hydrangea macrophylla HOM05D004693 ORTHO05D005545 5.7e-86 322.0 235 68.1
Manes.02G068600 Manihot esculenta HOM05D004693 ORTHO05D005545 8.2e-85 318.2 211 75.8
Prupe.5G053500 Prunus persica HOM05D004693 ORTHO05D005545 9.1e-84 314.7 226 70.4
PSO478G2919 Papaver somniferum HOM05D004693 ORTHO05D005545 2.0e-83 313.5 231 72.3
Actinidia15883 Actinidia chinensis HOM05D004693 ORTHO05D005545 5.9e-83 312.0 245 68.2
Dinv33946 Davidia involucrata HOM05D004693 ORTHO05D005545 5.9e-83 312.0 207 74.4
MD00G1132400 Malus domestica HOM05D004693 ORTHO05D005545 3.2e-81 306.2 226 67.7
PSO017G3734 Papaver somniferum HOM05D004693 ORTHO05D005545 5.5e-81 305.4 231 70.1
Ciclev10012575m.g Citrus clementina HOM05D004693 ORTHO05D005545 9.4e-81 304.7 209 70.8
Thecc.04G133900 Theobroma cacao HOM05D004693 ORTHO05D005545 1.2e-80 304.3 215 72.6
Sabra17G0095200 Salix brachista HOM05D004693 ORTHO05D005545 1.6e-80 303.9 260 61.5
TWI77G0167 Tripterygium wilfordii HOM05D004693 ORTHO05D005545 3.6e-80 302.8 211 72.5
Lj2A442G45 Lonicera japonica HOM05D004693 ORTHO05D005545 7.9e-80 301.6 216 69.4
Nn3g17869 Nelumbo nucifera HOM05D004693 ORTHO05D005545 3.9e-79 299.3 192 77.6
TWI53G0853 Tripterygium wilfordii HOM05D004693 ORTHO05D005545 6.7e-79 298.5 238 62.6
Atru.chr1.1699 Acer truncatum HOM05D004693 ORTHO05D005545 1.1e-78 297.7 213 67.6
MD06G1045700 Malus domestica HOM05D004693 ORTHO05D005545 3.3e-78 296.2 226 65.9
Gohir.A12G053800 Gossypium hirsutum HOM05D004693 ORTHO05D005545 4.4e-78 295.8 216 69.4
Gorai.008G055600 Gossypium raimondii HOM05D004693 ORTHO05D005545 4.4e-78 295.8 216 69.4
RcHm_v2.0_Chr7g0206351 Rosa chinensis HOM05D004693 ORTHO05D005545 4.4e-78 295.8 211 71.1
Gohir.D12G052500 Gossypium hirsutum HOM05D004693 ORTHO05D005545 7.4e-78 295.0 216 69.4
vmacro05556 Vaccinium macrocarpon HOM05D004693 ORTHO05D005545 7.4e-78 295.0 215 70.7
Potri.017G114900 Populus trichocarpa HOM05D004693 ORTHO05D005545 3.7e-77 292.7 208 72.1
MD09G1253000 Malus domestica HOM05D004693 ORTHO05D005545 4.8e-77 292.4 211 69.2
FvH4_5g20670 Fragaria vesca HOM05D004693 ORTHO05D005545 1.1e-76 291.2 235 63.4
Prupe.3G157500 Prunus persica HOM05D004693 ORTHO05D005545 1.1e-76 291.2 213 69.0
CANSAT78G0919 Cannabis sativa HOM05D004693 ORTHO05D005545 1.5e-75 287.3 209 70.3
CsaV3_3G020700 Cucumis sativus L. HOM05D004693 ORTHO05D005545 6.5e-74 282.0 212 67.5
ATR1125G077 Amborella trichopoda HOM05D004693 ORTHO05D005545 1.1e-73 281.2 232 61.6
Eucgr.F02496 Eucalyptus grandis HOM05D004693 ORTHO05D005545 1.1e-73 281.2 214 63.6
DCAR_025914 Daucus carota HOM05D004693 ORTHO05D005545 2.5e-73 280.0 227 63.0
Solyc02g063170.3 Solanum lycopersicum HOM05D004693 ORTHO05D005545 3.2e-73 279.6 207 67.1
HanXRQChr12g0376541 Helianthus annuus HOM05D004693 ORTHO05D005545 4.2e-73 279.3 213 65.3
Sopen02g014240 Solanum pennellii HOM05D004693 ORTHO05D005545 1.2e-72 277.7 207 67.1
PGSC0003DMG400024184 Solanum tuberosum HOM05D004693 ORTHO05D005545 1.2e-72 277.7 207 66.7
Hund13716 Selenicereus undatus HOM05D004693 ORTHO05D005545 1.6e-72 277.3 206 69.9
Actinidia36320 Actinidia chinensis HOM05D004693 ORTHO05D005545 2.7e-72 276.6 238 63.9
ClCG05G011670 Citrullus lanatus HOM05D004693 ORTHO05D005545 2.7e-72 276.6 212 67.0
Sopen02g030740 Solanum pennellii HOM05D004693 ORTHO05D005545 1.8e-71 273.9 203 69.0
Sabra04G0080500 Salix brachista HOM05D004693 ORTHO05D005545 2.3e-71 273.5 268 56.7
DCAR_017191 Daucus carota HOM05D004693 ORTHO05D005545 3.9e-71 272.7 199 69.3
MSTRG.15294 Avicennia marina HOM05D004693 ORTHO05D005545 1.1e-70 271.2 204 65.2
Glyma.18G296600 Glycine max HOM05D004693 ORTHO05D005545 2.6e-70 270.0 229 62.0
ECA246G3075 Erigeron canadensis HOM05D004693 ORTHO05D005545 3.3e-70 269.6 210 65.2
Solyc02g086050.3 Solanum lycopersicum HOM05D004693 ORTHO05D005545 4.4e-70 269.2 192 70.8
PGR004G1354 Punica granatum HOM05D004693 ORTHO05D005545 5.7e-70 268.9 188 72.9
Sed0027829 Sechium edule HOM05D004693 ORTHO05D005545 7.4e-70 268.5 186 71.5
FAN13G1234 Fragaria x ananassa HOM05D004693 ORTHO05D005545 1.3e-69 267.7 268 55.2
Lsat_1_v5_gn_3_79761 Lactuca sativa HOM05D004693 ORTHO05D005545 2.2e-69 266.9 202 67.8
Glyma.08G365700 Glycine max HOM05D004693 ORTHO05D005545 3.7e-69 266.2 232 60.3
PGSC0003DMG401026407 Solanum tuberosum HOM05D004693 ORTHO05D005545 3.7e-69 266.2 198 69.7
Oeu010266.2 Olea europaea HOM05D004693 ORTHO05D005545 6.3e-69 265.4 178 74.7
Nitab4.5_0001217g0030 Nicotiana tabacum HOM05D004693 ORTHO05D005545 8.2e-69 265.0 201 66.7
Phvul.008G005900 Phaseolus vulgaris HOM05D004693 ORTHO05D005545 8.2e-69 265.0 234 59.0
A02p13930 Brassica napus HOM05D004693 ORTHO05D005545 1.1e-68 264.6 209 65.6
BraA02t06454Z Brassica rapa HOM05D004693 ORTHO05D005545 1.1e-68 264.6 209 65.6
CAN.G225.4 Capsicum annuum HOM05D004693 ORTHO05D005545 1.1e-68 264.6 199 66.3
Glyma.19G047800 Glycine max HOM05D004693 ORTHO05D005545 1.4e-68 264.2 190 68.9
Peaxi162Scf00501g00318 Petunia axillaris HOM05D004693 ORTHO05D005545 1.8e-68 263.8 199 67.8
BolC2t08398H Brassica oleracea HOM05D004693 ORTHO05D005545 4.1e-68 262.7 213 64.3
Psat3g205360 Pisum sativum HOM05D004693 ORTHO05D005545 4.1e-68 262.7 211 61.6
Ca_04048_v3 Cicer arietinum L. HOM05D004693 ORTHO05D005545 5.3e-68 262.3 211 62.6
TPR.G9726 Trifolium pratense HOM05D004693 ORTHO05D005545 5.3e-68 262.3 211 62.6
BcaC03g14797 Brassica carinata HOM05D004693 ORTHO05D005545 7.0e-68 261.9 213 64.3
C02p22440 Brassica napus HOM05D004693 ORTHO05D005545 7.0e-68 261.9 213 64.3
Thhalv10019078m.g Eutrema salsugineum HOM05D004693 ORTHO05D005545 9.1e-68 261.5 182 70.3
Lj1g0002546 Lotus japonicus HOM05D004693 ORTHO05D005545 9.1e-68 261.5 211 62.1
Medtr7g007280 Medicago truncatula HOM05D004693 ORTHO05D005545 9.1e-68 261.5 199 65.3
Sp5g22010 Schrenkiella parvula HOM05D004693 ORTHO05D005545 1.2e-67 261.2 181 72.9
Cc07_g08830 Coffea canephora HOM05D004693 ORTHO05D005545 4.5e-67 259.2 208 64.4
Lalb_Chr21g0317811 Lupinus albus HOM05D004693 ORTHO05D005545 4.5e-67 259.2 222 59.5
Medtr6g025680 Medicago truncatula HOM05D004693 ORTHO05D005545 4.5e-67 259.2 208 62.5
THA.LOC104805567 Tarenaya hassleriana HOM05D004693 ORTHO05D005545 4.5e-67 259.2 213 65.7
arahy.Tifrunner.gnm1.ann1.GG98DF Arachis hypogaea HOM05D004693 ORTHO05D005545 5.9e-67 258.8 221 58.8
arahy.Tifrunner.gnm1.ann1.INX0GQ Arachis hypogaea HOM05D004693 ORTHO05D005545 5.9e-67 258.8 221 58.8
AL2G25440 Arabidopsis lyrata HOM05D004693 ORTHO05D005545 1.3e-66 257.7 186 68.3
Phvul.007G143200 Phaseolus vulgaris HOM05D004693 ORTHO05D005545 1.3e-66 257.7 234 58.1
Nitab4.5_0004398g0030 Nicotiana tabacum HOM05D004693 ORTHO05D005545 1.7e-66 257.3 202 64.9
VMungo1383G0350 Vigna mungo HOM05D004693 ORTHO05D005545 2.9e-66 256.5 190 66.3
CAN.G625.24 Capsicum annuum HOM05D004693 ORTHO05D005545 3.8e-66 256.1 223 61.4
Aa31LG2G3480 Aethionema arabicum HOM05D004693 ORTHO05D005545 6.5e-66 255.4 180 68.9
Lalb_Chr17g0335881 Lupinus albus HOM05D004693 ORTHO05D005545 6.5e-66 255.4 236 58.5
Medtr6g018550 Medicago truncatula HOM05D004693 ORTHO05D005545 6.5e-66 255.4 204 62.7
SGA_v2.0_scaffold115G32108 Striga asiatica HOM05D000286 ORTHO05D000170 6.5e-66 255.4 211 64.0
Lj2g0008970 Lotus japonicus HOM05D004693 ORTHO05D005545 1.9e-65 253.8 181 68.5
BcaB05g24236 Brassica carinata HOM05D004693 ORTHO05D005545 3.2e-65 253.1 181 70.2
MSTRG.23575 Avicennia marina HOM05D004693 ORTHO05D005545 4.2e-65 252.7 216 61.1
TPR.G32451 Trifolium pratense HOM05D004693 ORTHO05D005545 5.5e-65 252.3 203 63.1
Carub.0002s1337 Capsella rubella HOM05D004693 ORTHO05D005545 9.4e-65 251.5 182 70.3
AT1G67080 Arabidopsis thaliana HOM05D004693 ORTHO05D005545 1.2e-64 251.1 178 68.0
CARHR059530 Cardamine hirsuta HOM05D004693 ORTHO05D005545 1.2e-64 251.1 179 70.9
Sed0024744 Sechium edule HOM05D004693 ORTHO05D005545 1.0e-63 248.1 199 63.3
QL02p051402 Quercus lobata HOM05D004693 ORTHO05D005545 5.7e-62 242.3 146 82.2
Ah.16g101760 Amaranthus hybridus HOM05D004693 ORTHO05D005545 7.5e-62 241.9 210 62.4
AUR62009000 Chenopodium quinoa HOM05D004693 ORTHO05D005545 1.7e-61 240.7 149 79.2
AUR62023302 Chenopodium quinoa HOM05D004693 ORTHO05D005545 2.2e-61 240.4 149 78.5
Migut.H00217 Erythranthe guttata HOM05D004693 ORTHO05D005545 2.2e-61 240.4 204 63.7
Sed0014747 Sechium edule HOM05D004693 ORTHO05D005545 1.1e-60 238.0 185 63.2
Nitab4.5_0000912g0240 Nicotiana tabacum HOM05D004693 ORTHO05D005545 1.4e-60 237.7 156 78.2
COL.COLO4_09328 Corchorus olitorius HOM05D004693 ORTHO05D005545 7.0e-60 235.3 145 79.3
HPP92_021861 Vanilla planifolia HOM05D004693 ORTHO05D005545 7.0e-60 235.3 202 59.9
Nitab4.5_0000659g0050 Nicotiana tabacum HOM05D004693 ORTHO05D005545 2.0e-59 233.8 144 81.2
Aqoxy3G00271 Aquilegia oxysepala HOM05D004693 ORTHO05D005545 2.7e-59 233.4 183 66.7
Zm00001eb335080 Zea mays HOM05D004693 ORTHO05D005545 3.5e-59 233.0 147 76.2
Migut.L00317 Erythranthe guttata HOM05D004693 ORTHO05D005545 5.9e-59 232.3 142 79.6
unitig_748.g8751 Utricularia gibba HOM05D004693 ORTHO05D005545 1.3e-58 231.1 212 58.0
Solyc03g034240.4 Solanum lycopersicum HOM05D004693 ORTHO05D005545 1.7e-58 230.7 207 56.5
unitig_32.g11889 Utricularia gibba HOM05D004693 ORTHO05D005545 1.7e-58 230.7 205 57.6
Os01g0128300 Oryza sativa ssp. japonica HOM05D004693 ORTHO05D005545 2.9e-58 229.9 155 72.9
SalBow3G4509 Salvia bowleyana HOM05D004693 ORTHO05D005545 3.8e-58 229.6 156 72.4
PGSC0003DMG402019589 Solanum tuberosum HOM05D004693 ORTHO05D005545 5.0e-58 229.2 207 56.5
Zm00001eb125470 Zea mays HOM05D004693 ORTHO05D005545 1.5e-57 227.6 173 67.1
SalBow5G5330 Salvia bowleyana HOM05D004693 ORTHO05D005545 4.2e-57 226.1 158 73.4
Nitab4.5_0002207g0070 Nicotiana tabacum HOM05D004693 ORTHO05D005545 7.2e-57 225.3 202 57.4
Sopen03g007020 Solanum pennellii HOM05D004693 ORTHO05D005545 2.1e-56 223.8 207 55.1
EL10Ac2g04567 Beta vulgaris HOM05D004693 ORTHO05D005545 4.7e-56 222.6 182 64.3
Eucgr.F02495 Eucalyptus grandis HOM05D004693 ORTHO05D005545 6.1e-56 222.2 162 67.3
MELO3C023805.2 Cucumis melo HOM05D004693 ORTHO05D005545 7.5e-54 215.3 128 81.2
SEGI_37456 Sequoiadendron giganteum HOM05D004693 ORTHO05D005545 8.3e-53 211.8 148 66.9
Duzib133G0419 Durio zibethinus HOM05D004693 ORTHO05D005545 8.6e-50 201.8 216 51.9
Pp3c12_21540 Physcomitrium patens HOM05D004693 ORTHO05D005545 4.2e-49 199.5 213 51.2
SGA_v2.0_scaffold33G13498 Striga asiatica HOM05D004693 ORTHO05D005545 8.0e-48 195.3 162 64.2
Cpa.g.sc282.10 Carica papaya HOM05D004693 ORTHO05D005545 1.8e-47 194.1 153 64.1
Peaxi162Scf00394g00618 Petunia axillaris HOM05D004693 ORTHO05D005545 1.2e-46 191.4 211 53.6
HanXRQChr15g0471501 Helianthus annuus HOM05D004693 ORTHO05D005545 2.0e-46 190.7 162 60.5
HPP92_000177 Vanilla planifolia HOM05D004693 ORTHO05D005545 2.6e-46 190.3 186 54.3
Mapoly0134s0007 Marchantia polymorpha HOM05D004693 ORTHO05D005545 2.2e-45 187.2 140 63.6
AagrBONN_evm.TU.Sc2ySwM_362.1317 Anthoceros agrestis HOM05D004693 ORTHO05D005545 5.4e-44 182.6 140 60.0
VMungo0464G1881 Vigna mungo HOM05D004693 ORTHO05D005545 9.2e-44 181.8 136 66.2
Pp3c3_37490 Physcomitrium patens HOM05D004693 ORTHO05D005545 2.0e-43 180.6 139 59.7
SMO356G0314 Selaginella moellendorffii HOM05D004693 ORTHO05D005545 4.5e-43 179.5 142 57.7
Psat1g081400 Pisum sativum HOM05D004693 ORTHO05D005545 1.7e-42 177.6 166 56.0
Nitab4.5_0002207g0120 Nicotiana tabacum HOM05D004693 ORTHO05D005545 1.0e-39 168.3 203 45.3
CDE12G0456 Ceratophyllum demersum HOM05D001541 ORTHO05D001465 8.9e-39 165.2 177 52.0
FAN18G0638 Fragaria x ananassa HOM05D000077 ORTHO05D005545 1.4e-36 157.9 147 59.9
CiPaw.04G042100 Carya illinoinensis HOM05D000286 ORTHO05D000170 2.4e-36 157.1 149 59.7
Peaxi162Scf00205g00220 Petunia axillaris HOM05D004693 ORTHO05D005545 1.5e-30 137.9 129 56.6
MD06G1045600 Malus domestica HOM05D004693 ORTHO05D005545 3.4e-30 136.7 156 53.2
Phvul.004G065900 Phaseolus vulgaris HOM05D004693 ORTHO05D005545 4.3e-25 119.8 111 56.8
AagrBONN_evm.TU.Sc2ySwM_362.1343 Anthoceros agrestis HOM05D004693 ORTHO05D005545 2.9e-21 107.1 79 62.0
PRCOL_00000715 Prasinoderma coloniale HOM05D004693 ORTHO05D005545 3.5e-19 100.1 140 39.3
MCO01G364 Micromonas commoda HOM05D004693 ORTHO05D005545 6.6e-18 95.9 147 34.7
MCO02G342 Micromonas commoda HOM05D004693 ORTHO05D005545 4.7e-16 89.7 131 35.1
Cre03.g207000 Chlamydomonas reinhardtii HOM05D004693 ORTHO05D005545 4.4e-14 83.2 153 32.7
Nitab4.5_0007808g0020 Nicotiana tabacum HOM05D004693 ORTHO05D005545 1.7e-13 81.3 81 49.4
Cre06.g255300 Chlamydomonas reinhardtii HOM05D004693 ORTHO05D005545 2.9e-13 80.5 154 29.9
VMungo0251G1321 Vigna mungo HOM05D000154 ORTHO05D000092 6.0e-11 72.8 83 50.6
Nitab4.5_0009855g0020 Nicotiana tabacum HOM05D004693 ORTHO05D005545 1.1e-09 68.6 84 50.0
CDE06G0519 Ceratophyllum demersum HOM05D004693 ORTHO05D005545 1.5e-09 68.2 99 42.4
PRCOL_00005350 Prasinoderma coloniale HOM05D004693 ORTHO05D005545 1.5e-09 68.2 120 30.0
PRCOL_00000440 Prasinoderma coloniale HOM05D004693 ORTHO05D005545 3.3e-09 67.0 170 29.4
MCO03G104 Micromonas commoda HOM05D004693 ORTHO05D005545 4.7e-08 63.2 184 26.6
QL02p051406 Quercus lobata HOM05D004693 ORTHO05D005545 9.9e-06 55.5 60 45.0


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