Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G1202 Trochodendron aralioides HOM05D000007 ORTHO05D007252 6.0e-91 337.4 162 100.0
TAR371G0533 Trochodendron aralioides HOM05D000007 ORTHO05D007252 9.0e-47 190.7 132 73.5
TAR371G1268 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.4e-44 183.3 166 60.2
TAR371G0451 Trochodendron aralioides HOM05D000007 ORTHO05D007252 6.1e-43 177.9 185 57.8
TAR371G0430 Trochodendron aralioides HOM05D000007 ORTHO05D007252 6.9e-39 164.5 159 60.4
TAR371G0292 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.2e-38 163.7 159 59.7
TAR371G1227 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.8e-31 139.8 143 58.0
TAR371G0647 Trochodendron aralioides HOM05D000007 ORTHO05D007252 5.3e-31 138.3 104 66.3
TAR371G0093 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.8e-29 132.1 143 53.1
TAR371G1225 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.1e-27 126.3 141 52.5
TAR371G0362 Trochodendron aralioides HOM05D000007 ORTHO05D007252 8.0e-27 124.4 136 56.6
TAR371G1173 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.0e-26 124.0 124 59.7
TAR371G0392 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.4e-25 118.6 175 46.3
TAR371G0432 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.4e-25 118.6 175 46.3
TAR371G0448 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.7e-24 115.5 99 60.6
TAR371G0023 Trochodendron aralioides HOM05D000007 ORTHO05D022563 2.9e-21 105.9 114 51.8
MBI19_g35552_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D000017 2.7e-19 99.4 162 40.1
MBI19_g26732_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 3.6e-19 99.0 147 42.2
TAR302G0003 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.4e-18 97.1 145 46.2
TAR371G0593 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.4e-18 97.1 92 56.5
MBI19_g35549_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 6.3e-16 88.2 139 41.0
MBI19_g26733_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 1.8e-15 86.7 163 38.7
Hma1.2p1_0022F.1_g014760 Hydrangea macrophylla HOM05D000007 ORTHO05D007252 1.3e-13 80.5 144 38.2
MBI19_g00242_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 1.7e-13 80.1 132 41.7
TAR374G0955 Trochodendron aralioides HOM05D013022 ORTHO05D007252 1.5e-12 77.0 166 33.1
Dinv18626 Davidia involucrata HOM05D009844 ORTHO05D007252 2.7e-11 72.8 138 34.1
Dinv26242 Davidia involucrata HOM05D009844 ORTHO05D007252 2.7e-11 72.8 138 34.1
Dinv41199 Davidia involucrata HOM05D001519 ORTHO05D001403 3.0e-10 69.3 129 34.1
Oeu044692.1 Olea europaea HOM05D000007 ORTHO05D007252 3.0e-10 69.3 133 36.1
QL03p068470 Quercus lobata HOM05D009398 ORTHO05D011511 6.8e-10 68.2 119 34.5
MSTRG.5952 Avicennia marina HOM05D000007 ORTHO05D007252 1.5e-09 67.0 133 35.3
Dinv26480 Davidia involucrata HOM05D009844 ORTHO05D007252 2.6e-09 66.2 153 31.4
TAR369G0473 Trochodendron aralioides HOM05D000007 ORTHO05D001644 3.4e-09 65.9 109 39.4
Dinv36193 Davidia involucrata HOM05D003981 ORTHO05D003666 5.7e-09 65.1 108 42.6
MBI15_g33468_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 5.7e-09 65.1 104 39.4
QL03p068339 Quercus lobata HOM05D009398 ORTHO05D011511 5.7e-09 65.1 99 36.4
Aqoxy4G00563 Aquilegia oxysepala HOM05D000007 ORTHO05D000521 7.5e-09 64.7 135 31.9
TAR374G0551 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.7e-08 63.5 136 31.6
QL03p066111 Quercus lobata HOM05D009398 ORTHO05D011511 2.2e-08 63.2 94 38.3
Aqoxy2G00817 Aquilegia oxysepala HOM05D000007 ORTHO05D000676 2.8e-08 62.8 94 35.1
Cfa008807 Carpinus fangiana HOM05D009398 ORTHO05D011511 2.8e-08 62.8 111 35.1
MD02G1067600 Malus domestica HOM05D009792 ORTHO05D009073 2.8e-08 62.8 97 35.1
Sabra13G0090000 Salix brachista HOM05D007726 ORTHO05D008819 3.7e-08 62.4 137 31.4
FvH4_4g07100 Fragaria vesca HOM05D000007 ORTHO05D009073 4.9e-08 62.0 114 29.8
QL03p062572 Quercus lobata HOM05D009398 ORTHO05D011511 4.9e-08 62.0 88 37.5
DCAR_016817 Daucus carota HOM05D000007 ORTHO05D003666 6.3e-08 61.6 95 40.0
MD11G1124100 Malus domestica HOM05D000007 ORTHO05D009073 6.3e-08 61.6 119 32.8
Aqoxy6G01802 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 8.3e-08 61.2 132 32.6
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 8.3e-08 61.2 115 32.2
QL03p062618 Quercus lobata HOM05D009398 ORTHO05D009073 1.1e-07 60.8 98 32.7
PGSC0003DMG400008507 Solanum tuberosum HOM05D000007 ORTHO05D007252 1.1e-07 60.8 107 41.1
MBI19_g46422_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 1.4e-07 60.5 73 45.2
Potri.013G104100 Populus trichocarpa HOM05D007726 ORTHO05D008819 1.4e-07 60.5 132 31.1
MD03G1110700 Malus domestica HOM05D000007 ORTHO05D009073 2.4e-07 59.7 87 36.8
Thecc.09G080800 Theobroma cacao HOM05D003814 ORTHO05D004399 2.4e-07 59.7 152 32.2
Medtr2g426070 Medicago truncatula HOM05D000007 ORTHO05D000017 7.0e-07 58.2 109 33.9
ClCG01G007450 Citrullus lanatus HOM05D000171 ORTHO05D009073 9.2e-07 57.8 82 35.4
TAR371G1271 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.2e-06 57.4 82 42.7
RcHm_v2.0_Chr4g0399251 Rosa chinensis HOM05D000007 ORTHO05D009073 1.6e-06 57.0 86 40.7
COL.COLO4_34567 Corchorus olitorius HOM05D007162 ORTHO05D007631 3.5e-06 55.8 80 38.8
PSO210G4357 Papaver somniferum HOM05D000007 ORTHO05D000676 4.5e-06 55.5 108 35.2
Hma1.2p1_0084F.1_g043690 Hydrangea macrophylla HOM05D000007 ORTHO05D007252 5.9e-06 55.1 167 29.9
PSO210G6233 Papaver somniferum HOM05D000007 ORTHO05D000676 5.9e-06 55.1 114 36.8


User provided reference genes

Program Settings