Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G1173 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.5e-82 308.1 145 100.0
TAR371G1225 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.7e-49 199.5 121 81.0
TAR371G0023 Trochodendron aralioides HOM05D000007 ORTHO05D022563 1.1e-43 180.3 99 88.9
TAR371G0392 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.2e-43 178.3 137 66.4
TAR371G0432 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.2e-43 178.3 137 66.4
TAR371G0430 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.6e-42 174.9 124 71.0
TAR371G0292 Trochodendron aralioides HOM05D000007 ORTHO05D007252 7.8e-42 174.1 124 70.2
TAR371G1227 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.9e-36 154.8 124 62.1
TAR371G0362 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.2e-34 150.2 124 61.3
TAR302G0003 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.5e-34 148.7 112 67.9
TAR371G0093 Trochodendron aralioides HOM05D000007 ORTHO05D007252 9.6e-32 140.6 122 60.7
TAR371G0451 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.6e-29 132.5 137 53.3
TAR371G1268 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.6e-29 132.5 124 56.5
TAR371G0533 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.2e-27 125.2 107 61.7
TAR371G1202 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.2e-27 125.2 124 59.7
TAR371G0448 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.5e-26 122.1 81 70.4
TAR371G1271 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.5e-26 122.1 59 100.0
TAR302G0004 Trochodendron aralioides HOM05D000007 ORTHO05D007252 9.6e-24 114.0 50 100.0
TAR302G0001 Trochodendron aralioides HOM05D000007 ORTHO05D007252 5.3e-22 108.2 54 98.1
MBI19_g26732_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 1.6e-18 96.7 122 45.9
TAR371G0593 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.1e-18 96.3 71 64.8
TAR374G0955 Trochodendron aralioides HOM05D013022 ORTHO05D007252 2.1e-18 96.3 125 44.8
Hma1.2p1_0022F.1_g014760 Hydrangea macrophylla HOM05D000007 ORTHO05D007252 5.1e-17 91.7 131 42.7
MBI19_g35549_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 8.7e-17 90.9 130 40.8
Oeu044692.1 Olea europaea HOM05D000007 ORTHO05D007252 7.4e-16 87.8 129 41.9
MBI19_g35552_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D000017 2.2e-15 86.3 124 38.7
TAR371G0647 Trochodendron aralioides HOM05D000007 ORTHO05D007252 6.3e-15 84.7 79 54.4
TAR374G0551 Trochodendron aralioides HOM05D000007 ORTHO05D007252 6.3e-15 84.7 127 40.2
Actinidia38511 Actinidia chinensis HOM05D000007 ORTHO05D007252 1.4e-14 83.6 127 43.3
Dinv41199 Davidia involucrata HOM05D001519 ORTHO05D001403 2.4e-14 82.8 123 39.0
MBI19_g00242_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 6.9e-14 81.3 120 39.2
Nitab4.5_0001504g0060 Nicotiana tabacum HOM05D000007 ORTHO05D007252 6.9e-14 81.3 122 36.1
Nitab4.5_0000157g0070 Nicotiana tabacum HOM05D000007 ORTHO05D007252 9.0e-14 80.9 134 35.8
Dinv18626 Davidia involucrata HOM05D009844 ORTHO05D007252 1.2e-13 80.5 123 36.6
Dinv26242 Davidia involucrata HOM05D009844 ORTHO05D007252 1.2e-13 80.5 123 36.6
MBI19_g26733_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 1.5e-13 80.1 117 40.2
PGSC0003DMG400008507 Solanum tuberosum HOM05D000007 ORTHO05D007252 1.5e-13 80.1 122 39.3
Nitab4.5_0000157g0100 Nicotiana tabacum HOM05D000007 ORTHO05D007252 1.0e-12 77.4 124 34.7
MSTRG.5952 Avicennia marina HOM05D000007 ORTHO05D007252 1.7e-12 76.6 122 37.7
Rhsim03G0268000 Rhododendron simsii HOM05D000007 ORTHO05D007252 2.2e-12 76.3 126 39.7
Rhsim07G0245000 Rhododendron simsii HOM05D001026 ORTHO05D007252 2.9e-12 75.9 126 39.7
SGA_v2.0_scaffold31G12737 Striga asiatica HOM05D000007 ORTHO05D007252 3.8e-12 75.5 122 36.9
TAR369G0473 Trochodendron aralioides HOM05D000007 ORTHO05D001644 3.8e-12 75.5 124 37.1
Nitab4.5_0000157g0110 Nicotiana tabacum HOM05D000007 ORTHO05D007252 6.5e-12 74.7 124 33.9
MBI15_g33468_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 9.4e-11 70.9 114 34.2
Nitab4.5_0003898g0010 Nicotiana tabacum HOM05D000007 ORTHO05D007252 1.6e-10 70.1 121 34.7
QL03p062618 Quercus lobata HOM05D009398 ORTHO05D009073 2.1e-10 69.7 137 32.8
Nitab4.5_0007469g0010 Nicotiana tabacum HOM05D000007 ORTHO05D007252 2.7e-10 69.3 125 34.4
Migut.J00822 Erythranthe guttata HOM05D000007 ORTHO05D007252 3.6e-10 68.9 122 35.2
Dinv26480 Davidia involucrata HOM05D009844 ORTHO05D007252 6.1e-10 68.2 140 32.9
Nitab4.5_0001504g0050 Nicotiana tabacum HOM05D004526 ORTHO05D005548 7.9e-10 67.8 112 37.5
MBI19_g46422_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 2.3e-09 66.2 75 45.3
Nitab4.5_0007469g0030 Nicotiana tabacum HOM05D000007 ORTHO05D007252 2.3e-09 66.2 123 35.8
Aqoxy5G01431 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 3.9e-09 65.5 113 33.6
CSS0008734 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 3.9e-09 65.5 132 29.5
CSS0014327 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 3.9e-09 65.5 132 29.5
CSS0008666 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 6.7e-09 64.7 132 29.5
Lj5C336G7 Lonicera japonica HOM05D007560 ORTHO05D005947 2.5e-08 62.8 110 32.7
QL03p068470 Quercus lobata HOM05D009398 ORTHO05D011511 2.5e-08 62.8 139 31.7
Dinv26455 Davidia involucrata HOM05D000007 ORTHO05D013933 3.3e-08 62.4 125 29.6
QL03p065997 Quercus lobata HOM05D009398 ORTHO05D011511 3.3e-08 62.4 125 35.2
QL03p066121 Quercus lobata HOM05D009398 ORTHO05D011511 3.3e-08 62.4 125 35.2
TAR375G0750 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.3e-08 62.4 111 33.3
Peaxi162Scf00618g10023 Petunia axillaris HOM05D009844 ORTHO05D007252 4.3e-08 62.0 125 30.4
Atru.chr5.2443 Acer truncatum HOM05D003981 ORTHO05D003666 5.7e-08 61.6 117 31.6
Ciclev10033438m.g Citrus clementina HOM05D000007 ORTHO05D007252 5.7e-08 61.6 128 31.2
TAR375G0745 Trochodendron aralioides HOM05D000007 ORTHO05D007252 7.4e-08 61.2 104 33.7
Cfa008807 Carpinus fangiana HOM05D009398 ORTHO05D011511 9.7e-08 60.8 85 36.5
Peaxi162Scf00783g00335 Petunia axillaris HOM05D009844 ORTHO05D007252 9.7e-08 60.8 91 31.9
Actinidia38508 Actinidia chinensis HOM05D000007 ORTHO05D013933 1.7e-07 60.1 124 31.5
Aqoxy3G04127 Aquilegia oxysepala HOM05D000007 ORTHO05D000521 2.2e-07 59.7 125 28.8
Aqoxy5G01432 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.2e-07 59.7 72 34.7
CSS0006449 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 2.2e-07 59.7 132 26.5
Hma1.2p1_0657F.1_g197080 Hydrangea macrophylla HOM05D000007 ORTHO05D000017 2.8e-07 59.3 129 33.3
Os07g0242600 Oryza sativa ssp. japonica HOM05D014280 ORTHO05D018069 2.8e-07 59.3 139 30.2
Peaxi162Scf00324g00083 Petunia axillaris HOM05D013374 ORTHO05D013933 2.8e-07 59.3 126 32.5
Haze_11821 Corylus avellana HOM05D009398 ORTHO05D011511 3.7e-07 58.9 85 37.6
Lj6C390T13 Lonicera japonica HOM05D007560 ORTHO05D005947 3.7e-07 58.9 120 32.5
Lj5C336T6 Lonicera japonica HOM05D007560 ORTHO05D005947 4.8e-07 58.5 102 31.4
ClCG09G010150 Citrullus lanatus HOM05D007726 ORTHO05D008819 6.3e-07 58.2 79 36.7
Ciclev10006577m.g Citrus clementina HOM05D003981 ORTHO05D003666 6.3e-07 58.2 139 28.1
MD02G1067600 Malus domestica HOM05D009792 ORTHO05D009073 6.3e-07 58.2 88 34.1
Atru.chr5.2441 Acer truncatum HOM05D003981 ORTHO05D003666 8.2e-07 57.8 117 29.9
Aqoxy6G01701 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 8.2e-07 57.8 94 34.0
QL03p068339 Quercus lobata HOM05D009398 ORTHO05D011511 8.2e-07 57.8 152 30.3
Aqoxy2G03479 Aquilegia oxysepala HOM05D000007 ORTHO05D000521 1.1e-06 57.4 132 30.3
Dinv36193 Davidia involucrata HOM05D003981 ORTHO05D003666 1.1e-06 57.4 79 36.7
FvH4_4g07100 Fragaria vesca HOM05D000007 ORTHO05D009073 1.1e-06 57.4 124 27.4
HanXRQChr04g0095931 Helianthus annuus HOM05D000171 ORTHO05D009073 1.1e-06 57.4 127 29.9
Peaxi162Scf00129g01225 Petunia axillaris HOM05D009844 ORTHO05D007252 1.1e-06 57.4 129 29.5
QL03p062572 Quercus lobata HOM05D009398 ORTHO05D011511 1.1e-06 57.4 144 29.2
Aqoxy2G03976 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.4e-06 57.0 97 29.9
ClCG01G007450 Citrullus lanatus HOM05D000171 ORTHO05D009073 1.4e-06 57.0 142 28.9
Nn1g03296 Nelumbo nucifera HOM05D000007 ORTHO05D003666 1.4e-06 57.0 126 27.8
MELO3C024088.2 Cucumis melo HOM05D007726 ORTHO05D008819 1.8e-06 56.6 79 35.4
CsaV3_7G024580 Cucumis sativus L. HOM05D007726 ORTHO05D008819 2.4e-06 56.2 79 35.4
HanXRQChr04g0095821 Helianthus annuus HOM05D000171 ORTHO05D009073 2.4e-06 56.2 128 30.5
MD10G1332600 Malus domestica HOM05D000007 ORTHO05D000017 2.4e-06 56.2 127 31.5
Aqoxy7G01104 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 3.1e-06 55.8 103 26.2
CAN.G921.4 Capsicum annuum HOM05D013374 ORTHO05D013933 3.1e-06 55.8 101 33.7
FvH4_4g34281 Fragaria vesca HOM05D000691 ORTHO05D000378 3.1e-06 55.8 132 31.1
Rhsim11G0104400 Rhododendron simsii HOM05D007560 ORTHO05D005947 3.1e-06 55.8 72 38.9
Aqoxy5G04187 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 4.1e-06 55.5 76 31.6
COL.COLO4_36676 Corchorus olitorius HOM05D000007 ORTHO05D007252 4.1e-06 55.5 123 29.3
Nitab4.5_0000259g0320 Nicotiana tabacum HOM05D000007 ORTHO05D000521 4.1e-06 55.5 125 28.8
RcHm_v2.0_Chr3g0480281 Rosa chinensis HOM05D003981 ORTHO05D003666 4.1e-06 55.5 71 36.6
Ciclev10015432m.g Citrus clementina HOM05D000007 ORTHO05D000017 5.3e-06 55.1 136 27.9
Dinv05357 Davidia involucrata HOM05D000007 ORTHO05D000521 5.3e-06 55.1 143 30.8
Hma1.2p1_0084F.1_g043690 Hydrangea macrophylla HOM05D000007 ORTHO05D007252 5.3e-06 55.1 140 33.6
Peaxi162Scf00185g00710 Petunia axillaris HOM05D009844 ORTHO05D007252 5.3e-06 55.1 94 31.9
Peaxi162Scf00185g00820 Petunia axillaris HOM05D009844 ORTHO05D007252 5.3e-06 55.1 94 31.9
Prupe.2G209200 Prunus persica HOM05D003981 ORTHO05D003666 5.3e-06 55.1 71 36.6
CAN.G1076.9 Capsicum annuum HOM05D009844 ORTHO05D007252 6.9e-06 54.7 127 28.3
Lj4C650T12 Lonicera japonica HOM05D013022 ORTHO05D007252 6.9e-06 54.7 119 28.6
MD13G1020600 Malus domestica HOM05D000007 ORTHO05D009073 6.9e-06 54.7 131 29.8
Manes.18G107700 Manihot esculenta HOM05D007726 ORTHO05D008819 6.9e-06 54.7 82 34.1
Medtr2g037520 Medicago truncatula HOM05D000007 ORTHO05D000017 6.9e-06 54.7 74 35.1
Nitab4.5_0000762g0110 Nicotiana tabacum HOM05D013374 ORTHO05D013933 6.9e-06 54.7 100 32.0
Lj4A649T29 Lonicera japonica HOM05D013022 ORTHO05D007252 9.1e-06 54.3 126 29.4
Medtr4g070550 Medicago truncatula HOM05D000007 ORTHO05D000017 9.1e-06 54.3 125 28.0
Sed0014390 Sechium edule HOM05D007726 ORTHO05D008819 9.1e-06 54.3 79 34.2


User provided reference genes

Program Settings