Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 9.5e-159 563.5 299 100.0
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 1.4e-157 559.7 299 99.3
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 6.3e-86 321.6 268 66.4
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 3.0e-80 302.8 196 78.6
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 3.1e-77 292.7 220 72.7
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 2.0e-76 290.0 284 60.6
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 3.5e-76 289.3 205 76.6
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 7.7e-76 288.1 257 65.4
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 3.8e-75 285.8 186 80.1
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 1.2e-73 280.8 263 63.5
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 4.7e-73 278.9 279 60.2
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 1.0e-72 277.7 265 62.6
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 1.8e-72 276.9 262 62.2
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 3.9e-72 275.8 273 59.3
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 5.2e-72 275.4 274 60.2
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 5.2e-72 275.4 257 61.5
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 5.2e-72 275.4 234 65.4
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 5.7e-71 271.9 206 70.4
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 9.7e-71 271.2 218 66.5
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 1.3e-70 270.8 275 58.9
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 1.7e-70 270.4 246 64.2
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 2.2e-70 270.0 265 60.8
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 2.8e-70 269.6 268 58.6
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.8e-70 269.6 259 59.8
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 4.8e-70 268.9 181 76.2
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 6.3e-70 268.5 198 70.7
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 6.3e-70 268.5 212 66.5
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 6.3e-70 268.5 238 62.6
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 8.2e-70 268.1 187 73.8
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 1.1e-69 267.7 191 72.8
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 5.3e-69 265.4 262 59.2
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 7.0e-69 265.0 246 60.2
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 3.5e-68 262.7 156 86.5
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 5.9e-68 261.9 245 60.0
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 1.7e-67 260.4 220 64.5
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 1.7e-67 260.4 269 57.2
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 2.9e-67 259.6 250 60.8
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 6.5e-67 258.5 261 56.7
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 6.5e-67 258.5 266 56.8
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 1.1e-66 257.7 217 63.1
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 2.5e-66 256.5 250 58.8
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 3.2e-66 256.1 227 63.9
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 4.2e-66 255.8 215 63.3
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 4.2e-66 255.8 217 62.7
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 7.2e-66 255.0 184 73.4
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 9.4e-66 254.6 231 59.7
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 1.6e-65 253.8 277 56.3
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 2.1e-65 253.4 187 71.7
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 2.7e-65 253.1 264 58.0
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 4.7e-65 252.3 263 55.1
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 4.7e-65 252.3 160 81.9
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 6.1e-65 251.9 279 55.2
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 1.0e-64 251.1 261 54.4
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 1.4e-64 250.8 171 75.4
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 1.4e-64 250.8 268 54.5
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 1.8e-64 250.4 247 56.3
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 2.3e-64 250.0 216 65.3
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 3.0e-64 249.6 232 62.9
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 3.0e-64 249.6 171 76.0
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 8.8e-64 248.1 171 74.9
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 8.8e-64 248.1 253 58.9
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 1.2e-63 247.7 177 72.9
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 1.2e-63 247.7 177 72.9
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 1.5e-63 247.3 271 55.7
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 7.5e-63 245.0 258 55.8
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 3.7e-62 242.7 203 65.5
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 3.7e-62 242.7 236 59.3
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 6.3e-62 241.9 178 72.5
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 1.6e-60 237.3 194 63.4
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 1.6e-60 237.3 289 51.2
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 2.0e-60 236.9 182 68.7
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 2.0e-60 236.9 246 57.7
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 1.3e-59 234.2 195 65.6
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 1.3e-59 234.2 252 55.2
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.3e-59 234.2 292 50.7
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 1.7e-59 233.8 216 63.0
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 8.5e-59 231.5 244 57.0
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 8.5e-59 231.5 244 57.0
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 1.5e-58 230.7 170 72.4
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 2.5e-58 229.9 280 49.3
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 7.2e-58 228.4 136 86.0
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 1.2e-57 227.6 244 57.0
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 1.0e-56 224.6 138 82.6
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 2.3e-56 223.4 256 56.2
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 3.0e-56 223.0 256 56.2
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 8.8e-56 221.5 161 72.0
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 8.8e-56 221.5 309 49.5
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 1.5e-55 220.7 196 58.2
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 4.4e-55 219.2 218 55.0
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 5.7e-55 218.8 237 55.7
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 1.7e-54 217.2 354 45.8
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 8.3e-54 214.9 221 53.8
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 1.1e-53 214.5 194 66.0
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 7.0e-53 211.8 181 65.2
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 1.6e-52 210.7 165 64.2
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 2.0e-52 210.3 150 73.3
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 4.5e-52 209.1 164 63.4
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 2.3e-51 206.8 221 55.2
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 1.5e-50 204.1 222 53.6
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 3.4e-47 193.0 258 48.8
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 7.5e-47 191.8 212 54.2
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 1.3e-46 191.0 196 57.1
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 2.0e-44 183.7 187 56.1
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 3.3e-42 176.4 143 67.1
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 4.3e-42 176.0 184 58.7
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 1.2e-39 167.9 274 43.8
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 8.3e-38 161.8 250 44.0
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 1.6e-36 157.5 172 48.8
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 6.6e-35 152.1 172 47.7
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 4.0e-32 142.9 176 51.1
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 4.3e-26 122.9 106 55.7
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 4.3e-26 122.9 82 74.4
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 3.7e-22 109.8 80 71.2
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 4.1e-21 106.3 169 38.5
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 1.7e-19 100.9 205 41.0
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 6.6e-19 99.0 79 67.1
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 7.3e-18 95.5 154 34.4
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 2.2e-14 84.0 155 34.8
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 2.2e-14 84.0 99 50.5
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 1.9e-10 70.9 66 59.1
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 2.8e-09 67.0 53 64.2
Eucgr.G02394 Eucalyptus grandis HOM05D006650 ORTHO05D008401 1.4e-08 64.7 46 67.4


User provided reference genes

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