Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G1076 Trochodendron aralioides HOM05D004761 ORTHO05D005813 5.9e-49 197.2 99 100.0
TAR629G2706 Trochodendron aralioides HOM05D004761 ORTHO05D005813 3.8e-32 141.4 97 75.3
Nitab4.5_0000791g0110 Nicotiana tabacum HOM05D004761 ORTHO05D005813 8.6e-32 140.2 94 74.5
CiPaw.16G065200 Carya illinoinensis HOM05D004761 ORTHO05D005813 1.9e-31 139.0 86 79.1
Nitab4.5_0003373g0010 Nicotiana tabacum HOM05D004761 ORTHO05D005813 1.9e-31 139.0 94 73.4
Oeu003182.1 Olea europaea HOM05D004761 ORTHO05D005813 4.3e-31 137.9 87 77.0
Gohir.D11G344800 Gossypium hirsutum HOM05D004761 ORTHO05D005813 7.3e-31 137.1 93 74.2
Ciclev10016274m.g Citrus clementina HOM05D004761 ORTHO05D005813 9.5e-31 136.7 87 77.0
Gohir.A03G147200 Gossypium hirsutum HOM05D004761 ORTHO05D005813 1.2e-30 136.3 94 75.5
Gohir.D02G170400 Gossypium hirsutum HOM05D004761 ORTHO05D005813 1.2e-30 136.3 94 75.5
Gorai.005G191400 Gossypium raimondii HOM05D004761 ORTHO05D005813 1.2e-30 136.3 94 75.5
Gorai.007G375200 Gossypium raimondii HOM05D004761 ORTHO05D005813 1.2e-30 136.3 93 74.2
Potri.008G121100 Populus trichocarpa HOM05D004761 ORTHO05D005813 1.2e-30 136.3 88 73.9
Potri.010G124301 Populus trichocarpa HOM05D004761 ORTHO05D005813 1.2e-30 136.3 88 73.9
Cfa018591 Carpinus fangiana HOM05D004761 ORTHO05D005813 2.1e-30 135.6 96 70.8
COL.COLO4_29943 Corchorus olitorius HOM05D004761 ORTHO05D005813 2.1e-30 135.6 87 75.9
MD13G1041400 Malus domestica HOM05D004761 ORTHO05D005813 2.1e-30 135.6 94 72.3
CSS0041255 Camellia sinensis var. sinensis HOM05D004761 ORTHO05D005813 2.8e-30 135.2 93 73.1
Solyc05g009370.4 Solanum lycopersicum HOM05D004761 ORTHO05D005813 2.8e-30 135.2 94 73.4
Sopen05g005170 Solanum pennellii HOM05D004761 ORTHO05D005813 2.8e-30 135.2 94 73.4
Sabra08G0091800 Salix brachista HOM05D004761 ORTHO05D005813 3.6e-30 134.8 88 71.6
CANSAT01G0623 Cannabis sativa HOM05D004761 ORTHO05D005813 4.7e-30 134.4 98 71.4
Cpa.g.sc1.34 Carica papaya HOM05D004761 ORTHO05D005813 4.7e-30 134.4 88 72.7
FAN12G1206 Fragaria x ananassa HOM05D004761 ORTHO05D005813 6.1e-30 134.0 92 70.7
HanXRQChr15g0476311 Helianthus annuus HOM05D004761 ORTHO05D005813 6.1e-30 134.0 93 71.0
A06p42360 Brassica napus HOM05D004761 ORTHO05D005813 8.0e-30 133.7 97 71.1
BraA06t27151Z Brassica rapa HOM05D004761 ORTHO05D005813 8.0e-30 133.7 97 71.1
Duzib248G0790 Durio zibethinus HOM05D004761 ORTHO05D005813 8.0e-30 133.7 85 76.5
Manes.14G102900 Manihot esculenta HOM05D004761 ORTHO05D005813 8.0e-30 133.7 94 70.2
TWI79G0635 Tripterygium wilfordii HOM05D004761 ORTHO05D005813 8.0e-30 133.7 88 72.7
FvH4_4g27310 Fragaria vesca HOM05D004761 ORTHO05D005813 1.0e-29 133.3 92 70.7
FAN07G1541 Fragaria x ananassa HOM05D004761 ORTHO05D005813 1.0e-29 133.3 92 70.7
FAN12G1874 Fragaria x ananassa HOM05D004761 ORTHO05D005813 1.0e-29 133.3 92 70.7
Carub.0005s0378 Capsella rubella HOM05D004761 ORTHO05D005813 1.8e-29 132.5 93 69.9
Rhsim09G0107700 Rhododendron simsii HOM05D004761 ORTHO05D005813 2.3e-29 132.1 84 76.2
arahy.Tifrunner.gnm1.ann1.QJ0JEK Arachis hypogaea HOM05D004761 ORTHO05D005813 3.0e-29 131.7 91 70.3
FAN22G1660 Fragaria x ananassa HOM05D004761 ORTHO05D005813 3.0e-29 131.7 86 75.6
Hma1.2p1_0061F.1_g033840 Hydrangea macrophylla HOM05D004761 ORTHO05D005813 3.0e-29 131.7 91 70.3
TWI31G0637 Tripterygium wilfordii HOM05D004761 ORTHO05D005813 3.0e-29 131.7 88 71.6
arahy.Tifrunner.gnm1.ann1.8WFG9Z Arachis hypogaea HOM05D004761 ORTHO05D005813 4.0e-29 131.3 88 71.6
arahy.Tifrunner.gnm1.ann1.BGN30W Arachis hypogaea HOM05D004761 ORTHO05D005813 4.0e-29 131.3 88 71.6
Peaxi162Scf00382g00825 Petunia axillaris HOM05D004761 ORTHO05D005813 5.2e-29 131.0 88 72.7
PGR119G1215 Punica granatum HOM05D004761 ORTHO05D005813 5.2e-29 131.0 87 73.6
vmacro10560 Vaccinium macrocarpon HOM05D004761 ORTHO05D005813 5.2e-29 131.0 84 76.2
AL5G14580 Arabidopsis lyrata HOM05D004761 ORTHO05D005813 6.8e-29 130.6 93 68.8
A09p25090 Brassica napus HOM05D004761 ORTHO05D005813 6.8e-29 130.6 86 74.4
BraA09t38096Z Brassica rapa HOM05D004761 ORTHO05D005813 6.8e-29 130.6 86 74.4
Prupe.1G311800 Prunus persica HOM05D004761 ORTHO05D005813 6.8e-29 130.6 86 73.3
arahy.Tifrunner.gnm1.ann1.V6GCEW Arachis hypogaea HOM05D004761 ORTHO05D005813 8.9e-29 130.2 88 70.5
MSTRG.843 Avicennia marina HOM05D004761 ORTHO05D005813 8.9e-29 130.2 91 69.2
CAN.G610.79 Capsicum annuum HOM05D004761 ORTHO05D005813 8.9e-29 130.2 94 72.3
DCAR_023656 Daucus carota HOM05D004761 ORTHO05D005813 8.9e-29 130.2 91 70.3
Lj5g0002032 Lotus japonicus HOM05D004761 ORTHO05D005813 1.2e-28 129.8 88 69.3
SEGI_01542 Sequoiadendron giganteum HOM05D004761 ORTHO05D005813 1.2e-28 129.8 85 76.5
PGSC0003DMG400014544 Solanum tuberosum HOM05D004761 ORTHO05D005813 1.2e-28 129.8 81 77.8
CDE05G1514 Ceratophyllum demersum HOM05D004761 ORTHO05D005813 1.5e-28 129.4 87 71.3
Eucgr.G02317 Eucalyptus grandis HOM05D004761 ORTHO05D005813 1.5e-28 129.4 91 70.3
Thhalv10004759m.g Eutrema salsugineum HOM05D004761 ORTHO05D005813 1.5e-28 129.4 86 73.3
RcHm_v2.0_Chr4g0435111 Rosa chinensis HOM05D004761 ORTHO05D005813 1.5e-28 129.4 92 69.6
BcaB07g30626 Brassica carinata HOM05D004761 ORTHO05D005813 2.0e-28 129.0 84 73.8
Cc11_g10100 Coffea canephora HOM05D004761 ORTHO05D005813 2.0e-28 129.0 89 73.0
Sp2g15160 Schrenkiella parvula HOM05D004761 ORTHO05D005813 2.0e-28 129.0 93 66.7
BcaC06g31103 Brassica carinata HOM05D004761 ORTHO05D005813 2.6e-28 128.6 94 70.2
BolC7t44030H Brassica oleracea HOM05D004761 ORTHO05D005813 2.6e-28 128.6 94 69.1
ECA246G4195 Erigeron canadensis HOM05D004761 ORTHO05D005813 2.6e-28 128.6 86 72.1
MD16G1042300 Malus domestica HOM05D004761 ORTHO05D005813 2.6e-28 128.6 94 69.1
VMungo0720G0616 Vigna mungo HOM05D004761 ORTHO05D005813 3.4e-28 128.3 85 72.9
AT3G25920 Arabidopsis thaliana HOM05D004761 ORTHO05D005813 4.4e-28 127.9 86 73.3
Sed0020611 Sechium edule HOM05D004761 ORTHO05D005813 4.4e-28 127.9 87 70.1
GSVIVG01011891001 Vitis vinifera HOM05D004761 ORTHO05D005813 4.4e-28 127.9 86 73.3
CARHR146910 Cardamine hirsuta HOM05D004761 ORTHO05D005813 5.7e-28 127.5 86 73.3
Lsat_1_v5_gn_3_59080 Lactuca sativa HOM05D004761 ORTHO05D005813 5.7e-28 127.5 80 75.0
C07p34980 Brassica napus HOM05D004761 ORTHO05D005813 7.5e-28 127.1 94 68.1
Lj3C1014G6 Lonicera japonica HOM05D004761 ORTHO05D005813 7.5e-28 127.1 87 72.4
THA.LOC104825698 Tarenaya hassleriana HOM05D004761 ORTHO05D005813 7.5e-28 127.1 84 73.8
C09p32130 Brassica napus HOM05D004761 ORTHO05D005813 9.8e-28 126.7 86 72.1
QL01p042268 Quercus lobata HOM05D004761 ORTHO05D005813 1.3e-27 126.3 93 67.7
SGA_v2.0_scaffold170G38770 Striga asiatica HOM05D004761 ORTHO05D005813 1.3e-27 126.3 97 67.0
Dinv21082 Davidia involucrata HOM05D004761 ORTHO05D005813 1.7e-27 125.9 84 72.6
Gohir.D02G170233 Gossypium hirsutum HOM05D004761 ORTHO05D005813 1.7e-27 125.9 94 73.4
Actinidia16656 Actinidia chinensis HOM05D004761 ORTHO05D005813 2.2e-27 125.6 81 75.3
BcaC04g21408 Brassica carinata HOM05D004761 ORTHO05D005813 2.2e-27 125.6 86 70.9
BolC9t56063H Brassica oleracea HOM05D004761 ORTHO05D005813 2.2e-27 125.6 86 70.9
Sc11g0003470 Simmondsia chinensis HOM05D004761 ORTHO05D005813 2.9e-27 125.2 85 69.4
ClCG05G022660 Citrullus lanatus HOM05D004761 ORTHO05D005813 4.9e-27 124.4 78 76.9
MELO3C012254.2 Cucumis melo HOM05D004761 ORTHO05D005813 4.9e-27 124.4 78 76.9
CsaV3_5G034380 Cucumis sativus L. HOM05D004761 ORTHO05D005813 4.9e-27 124.4 78 76.9
Migut.E00345 Erythranthe guttata HOM05D004761 ORTHO05D005813 6.4e-27 124.0 81 72.8
Psat6g225000 Pisum sativum HOM05D004761 ORTHO05D005813 8.3e-27 123.6 90 67.8
ATR0171G026 Amborella trichopoda HOM05D004761 ORTHO05D005813 1.1e-26 123.2 84 69.0
Glyma.20G116100 Glycine max HOM05D004761 ORTHO05D005813 1.1e-26 123.2 94 67.0
Lalb_Chr21g0308901 Lupinus albus HOM05D004761 ORTHO05D005813 1.4e-26 122.9 87 69.0
Ca_11170_v3 Cicer arietinum L. HOM05D004761 ORTHO05D005813 1.8e-26 122.5 85 69.4
MBI19_g21031_MAGBIO Magnolia biondii HOM05D004761 ORTHO05D005813 3.2e-26 121.7 95 67.4
Lalb_Chr02g0145941 Lupinus albus HOM05D004761 ORTHO05D005813 1.6e-25 119.4 85 68.2
Phvul.007G027600 Phaseolus vulgaris HOM05D004761 ORTHO05D005813 2.0e-25 119.0 80 70.0
Aa31LG2G6400 Aethionema arabicum HOM05D004761 ORTHO05D005813 2.7e-25 118.6 79 70.9
Ah.02g127920 Amaranthus hybridus HOM05D004761 ORTHO05D005813 3.5e-25 118.2 84 67.9
Aqoxy3G00293 Aquilegia oxysepala HOM05D004761 ORTHO05D005813 4.6e-25 117.9 86 67.4
AUR62035212 Chenopodium quinoa HOM05D004761 ORTHO05D005813 5.9e-25 117.5 87 66.7
AUR62002860 Chenopodium quinoa HOM05D004761 ORTHO05D005813 1.3e-24 116.3 84 67.9
arahy.Tifrunner.gnm1.ann1.B0KB7I Arachis hypogaea HOM05D004761 ORTHO05D005813 1.7e-24 115.9 117 53.8
PSO675G3483 Papaver somniferum HOM05D004761 ORTHO05D005813 2.3e-24 115.5 86 64.0
BcaC06g33937 Brassica carinata HOM05D004761 ORTHO05D005813 3.0e-24 115.2 94 63.8
CDE05G0568 Ceratophyllum demersum HOM05D004761 ORTHO05D005813 3.0e-24 115.2 87 63.2
Thecc.02G229900 Theobroma cacao HOM05D004761 ORTHO05D005813 3.0e-24 115.2 87 65.5
PSO717G0038 Papaver somniferum HOM05D004761 ORTHO05D005813 5.0e-24 114.4 86 65.1
Hund25060 Selenicereus undatus HOM05D004761 ORTHO05D005813 5.0e-24 114.4 94 61.7
EL10Ac6g14394 Beta vulgaris HOM05D004761 ORTHO05D005813 8.6e-24 113.6 84 66.7
Zm00001eb008910 Zea mays HOM05D004761 ORTHO05D005813 8.6e-24 113.6 87 64.4
Medtr1g110750 Medicago truncatula HOM05D004761 ORTHO05D005813 1.1e-23 113.2 93 62.4
Os03g0219900 Oryza sativa ssp. japonica HOM05D004761 ORTHO05D005813 4.7e-22 107.8 87 59.8
Gohir.A11G325900 Gossypium hirsutum HOM05D004761 ORTHO05D005813 8.0e-22 107.1 73 71.2
Atru.chr11.97 Acer truncatum HOM05D004761 ORTHO05D005813 8.9e-21 103.6 80 65.0
AagrBONN_evm.TU.Sc2ySwM_228.2844 Anthoceros agrestis HOM05D004761 ORTHO05D005813 3.4e-20 101.7 86 57.0
Haze_17489 Corylus avellana HOM05D004761 ORTHO05D005813 2.2e-19 99.0 63 73.0
unitig_22.g5574 Utricularia gibba HOM05D004761 ORTHO05D005813 2.4e-18 95.5 70 67.1
Mapoly0065s0007 Marchantia polymorpha HOM05D004761 ORTHO05D005813 7.0e-18 94.0 82 53.7
Pp3c24_11450 Physcomitrium patens HOM05D004761 ORTHO05D005813 7.0e-18 94.0 84 53.6
SMO203G0084 Selaginella moellendorffii HOM05D004761 ORTHO05D005813 1.6e-17 92.8 88 52.3
Pp3c23_7670 Physcomitrium patens HOM05D004761 ORTHO05D005813 2.7e-17 92.0 80 53.8
Pp3c8_18220 Physcomitrium patens HOM05D004761 ORTHO05D005813 2.7e-17 92.0 84 52.4
Actinidia14894 Actinidia chinensis HOM05D004761 ORTHO05D005813 7.8e-17 90.5 56 76.8
Ah.03g137610 Amaranthus hybridus HOM05D004761 ORTHO05D005813 7.8e-17 90.5 62 69.4
Pp3c20_9200 Physcomitrium patens HOM05D004761 ORTHO05D005813 7.8e-17 90.5 80 52.5
Oeu056572.1 Olea europaea HOM05D004761 ORTHO05D005813 1.3e-16 89.7 66 65.2
TPR.G18808 Trifolium pratense HOM05D004761 ORTHO05D000002 3.9e-16 88.2 76 60.5
Hma1.2p1_0061F.1_g033850 Hydrangea macrophylla HOM05D004761 ORTHO05D005813 6.6e-16 87.4 60 66.7
Gohir.D02G170133 Gossypium hirsutum HOM05D004761 ORTHO05D005813 1.2e-14 83.2 55 78.2
Gorai.005G190700 Gossypium raimondii HOM05D004761 ORTHO05D005813 1.2e-14 83.2 55 78.2
DCAR_026734 Daucus carota HOM05D004761 ORTHO05D005813 2.0e-12 75.9 72 55.6
Sabra10G0094300 Salix brachista HOM05D004761 ORTHO05D005813 5.4e-10 67.8 92 42.4
Nitab4.5_0000057g0250 Nicotiana tabacum HOM05D004761 ORTHO05D005813 2.1e-09 65.9 39 79.5
MCO09G351 Micromonas commoda HOM05D004761 ORTHO05D005813 3.9e-08 61.6 68 42.6
CBR_g6324 Chara braunii HOM05D004761 ORTHO05D005813 5.1e-08 61.2 62 43.5
PRCOL_00000889 Prasinoderma coloniale HOM05D004761 ORTHO05D005813 2.1e-06 55.8 64 42.2
HPP92_009433 Vanilla planifolia HOM05D004761 ORTHO05D005813 8.1e-06 53.9 41 58.5


User provided reference genes

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