Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G1073 Trochodendron aralioides HOM05D011286 ORTHO05D000285 4.3e-121 438.0 216 100.0
TAR636G1415 Trochodendron aralioides HOM05D011286 ORTHO05D000285 5.3e-103 377.9 193 96.9
TAR629G0381 Trochodendron aralioides HOM05D011286 ORTHO05D000285 5.9e-102 374.4 192 96.4
TAR624G0658 Trochodendron aralioides HOM05D011286 ORTHO05D000285 9.8e-89 330.5 194 84.0
TAR629G0021 Trochodendron aralioides HOM05D003951 ORTHO05D000285 5.4e-47 191.8 101 93.1
TAR636G3139 Trochodendron aralioides HOM05D011286 ORTHO05D000285 5.6e-36 155.2 191 42.9
TAR371G0686 Trochodendron aralioides HOM05D011286 ORTHO05D000285 5.8e-33 145.2 199 43.7
TAR629G1419 Trochodendron aralioides HOM05D011286 ORTHO05D000285 1.6e-30 137.1 89 76.4
TAR164G0004 Trochodendron aralioides HOM05D000876 ORTHO05D000285 3.3e-28 129.4 190 35.8
TAR636G0716 Trochodendron aralioides HOM05D011286 ORTHO05D000285 1.9e-23 113.6 168 39.3
TAR093G0004 Trochodendron aralioides HOM05D011286 ORTHO05D000285 1.1e-20 104.4 168 35.1
TAR383G0653 Trochodendron aralioides HOM05D000555 ORTHO05D000285 7.6e-17 91.7 163 30.7
SHI10897 Sapria himalayana HOM05D007516 ORTHO05D000285 2.2e-16 90.1 186 32.3
SHI38234 Sapria himalayana HOM05D007516 ORTHO05D000285 2.2e-16 90.1 186 32.3
SHI43640 Sapria himalayana HOM05D007516 ORTHO05D000285 4.9e-16 89.0 186 32.3
TAR629G2499 Trochodendron aralioides HOM05D011286 ORTHO05D000285 4.9e-16 89.0 56 82.1
SHI03289 Sapria himalayana HOM05D007516 ORTHO05D000285 6.5e-16 88.6 187 33.7
Atru.chr11.1005 Acer truncatum HOM05D007516 ORTHO05D000285 1.1e-15 87.8 186 34.4
GSVIVG01010262001 Vitis vinifera HOM05D007516 ORTHO05D000285 1.2e-14 84.3 187 33.2
GSVIVG01023166001 Vitis vinifera HOM05D007516 ORTHO05D000285 4.6e-14 82.4 187 32.1
GSVIVG01038164001 Vitis vinifera HOM05D007516 ORTHO05D000285 5.1e-13 79.0 186 32.3
TAR164G0003 Trochodendron aralioides HOM05D000003 ORTHO05D000004 6.7e-13 78.6 116 32.8
Hund23719 Selenicereus undatus HOM05D000876 ORTHO05D000285 3.3e-12 76.3 230 25.7
TAR626G1564 Trochodendron aralioides HOM05D011286 ORTHO05D000285 4.3e-12 75.9 149 30.2
GSVIVG01017615001 Vitis vinifera HOM05D007516 ORTHO05D000285 1.3e-11 74.3 183 30.1
TAR628G1231 Trochodendron aralioides HOM05D011286 ORTHO05D000285 2.1e-11 73.6 89 46.1
Psat5g127400 Pisum sativum HOM05D000665 ORTHO05D000285 2.8e-11 73.2 210 28.1
SHI01773 Sapria himalayana HOM05D007516 ORTHO05D000285 6.3e-11 72.0 184 28.8
TAR624G0973 Trochodendron aralioides HOM05D000050 ORTHO05D002706 8.2e-11 71.6 89 44.9
Glyma.18G030600 Glycine max HOM05D000665 ORTHO05D000285 1.1e-10 71.2 192 27.1
Glyma.11G226600 Glycine max HOM05D000665 ORTHO05D000285 1.4e-10 70.9 188 29.3
TAR383G0393 Trochodendron aralioides HOM05D000876 ORTHO05D000285 1.8e-10 70.5 64 53.1
QL08p029247 Quercus lobata HOM05D013302 ORTHO05D015047 6.9e-10 68.6 193 27.5
TPR.G29813 Trifolium pratense HOM05D004575 ORTHO05D005774 6.9e-10 68.6 210 26.2
QL04p079613 Quercus lobata HOM05D000876 ORTHO05D000285 9.0e-10 68.2 202 27.7
TAR629G1617 Trochodendron aralioides HOM05D011286 ORTHO05D000285 9.0e-10 68.2 64 51.6
vmacro11323 Vaccinium macrocarpon HOM05D009321 ORTHO05D000285 9.0e-10 68.2 191 26.7
QL05p031161 Quercus lobata HOM05D000034 ORTHO05D000037 1.2e-09 67.8 193 28.0
Ca_14593_v3 Cicer arietinum L. HOM05D000665 ORTHO05D000285 2.6e-09 66.6 193 28.0
SHI24261 Sapria himalayana HOM05D007516 ORTHO05D000285 2.6e-09 66.6 172 29.7
VMungo1383G2642 Vigna mungo HOM05D000665 ORTHO05D000285 2.6e-09 66.6 192 29.7
Glyma.18G094800 Glycine max HOM05D000876 ORTHO05D000285 3.4e-09 66.2 206 24.8
Medtr3g070080 Medicago truncatula HOM05D000665 ORTHO05D000285 3.4e-09 66.2 193 26.4
SHI30596 Sapria himalayana HOM05D007516 ORTHO05D000285 5.9e-09 65.5 105 31.4
TAR365G0138 Trochodendron aralioides HOM05D011286 ORTHO05D000285 5.9e-09 65.5 111 30.6
CSS0033511 Camellia sinensis var. sinensis HOM05D000876 ORTHO05D000285 1.0e-08 64.7 192 26.6
TAR623G1608 Trochodendron aralioides HOM05D011286 ORTHO05D000285 1.0e-08 64.7 124 31.5
CSS0021579 Camellia sinensis var. sinensis HOM05D000876 ORTHO05D000285 1.3e-08 64.3 183 25.7
Phvul.001G240000 Phaseolus vulgaris HOM05D000665 ORTHO05D000285 1.3e-08 64.3 190 28.9
Hund14971 Selenicereus undatus HOM05D000876 ORTHO05D000285 1.3e-08 64.3 230 23.0
Nn8g39983 Nelumbo nucifera HOM05D000876 ORTHO05D000285 1.7e-08 63.9 215 25.1
Prupe.5G020800 Prunus persica HOM05D000876 ORTHO05D000285 2.9e-08 63.2 204 27.9
Hund08681 Selenicereus undatus HOM05D000876 ORTHO05D000285 2.9e-08 63.2 232 23.3
SHI24615 Sapria himalayana HOM05D007516 ORTHO05D000037 6.5e-08 62.0 74 39.2
TAR555G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 6.5e-08 62.0 159 27.0
CSS0048670 Camellia sinensis var. sinensis HOM05D000876 ORTHO05D000285 8.5e-08 61.6 193 26.4
FAN05G0722 Fragaria x ananassa HOM05D000876 ORTHO05D000285 8.5e-08 61.6 201 28.4
SHI29519 Sapria himalayana HOM05D007516 ORTHO05D000285 8.5e-08 61.6 178 28.1
Prupe.5G207000 Prunus persica HOM05D000876 ORTHO05D000285 1.1e-07 61.2 204 27.5
TAR636G2688 Trochodendron aralioides HOM05D020552 ORTHO05D000037 1.1e-07 61.2 191 25.7
Rhsim03G0139500 Rhododendron simsii HOM05D000876 ORTHO05D000285 1.4e-07 60.8 217 28.1
TAR376G0207 Trochodendron aralioides HOM05D020552 ORTHO05D000285 1.4e-07 60.8 201 27.4
Rhsim08G0056200 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.9e-07 60.5 187 25.1
arahy.Tifrunner.gnm1.ann1.NV9TN2 Arachis hypogaea HOM05D000034 ORTHO05D000037 2.5e-07 60.1 215 26.0
DCAR_020231 Daucus carota HOM05D000876 ORTHO05D000285 3.2e-07 59.7 214 26.2
SHI16925 Sapria himalayana HOM05D007516 ORTHO05D000285 3.2e-07 59.7 72 40.3
TAR374G0211 Trochodendron aralioides HOM05D011880 ORTHO05D015193 5.5e-07 58.9 186 27.4
FAN23G0201 Fragaria x ananassa HOM05D000876 ORTHO05D000285 7.2e-07 58.5 183 27.3
FAN23G2351 Fragaria x ananassa HOM05D000876 ORTHO05D000285 7.2e-07 58.5 183 27.3
TAR049G0004 Trochodendron aralioides HOM05D011286 ORTHO05D000285 7.2e-07 58.5 51 52.9
GSVIVG01017630001 Vitis vinifera HOM05D007516 ORTHO05D000285 7.2e-07 58.5 165 29.7
CANSAT21G1745 Cannabis sativa HOM05D000876 ORTHO05D000285 9.3e-07 58.2 198 23.7
CARHR207460 Cardamine hirsuta HOM05D000876 ORTHO05D000285 9.3e-07 58.2 184 25.5
FvH4_7g23930 Fragaria vesca HOM05D000876 ORTHO05D000285 9.3e-07 58.2 191 26.2
FAN01G0349 Fragaria x ananassa HOM05D000876 ORTHO05D000285 9.3e-07 58.2 191 26.2
FAN06G2005 Fragaria x ananassa HOM05D000876 ORTHO05D000285 9.3e-07 58.2 191 26.2
Lalb_Chr20g0116631 Lupinus albus HOM05D000876 ORTHO05D000285 9.3e-07 58.2 189 26.5
Oeu032678.2 Olea europaea HOM05D000876 ORTHO05D000285 9.3e-07 58.2 192 25.5
vmacro00850 Vaccinium macrocarpon HOM05D002121 ORTHO05D004000 9.3e-07 58.2 201 28.9
Ah.03g141330 Amaranthus hybridus HOM05D000876 ORTHO05D000285 1.2e-06 57.8 210 21.4
Ah.10g031690 Amaranthus hybridus HOM05D000034 ORTHO05D000285 1.2e-06 57.8 210 21.4
MBI06_g15021_MAGBIO Magnolia biondii HOM05D011286 ORTHO05D000285 1.2e-06 57.8 85 41.2
FAN02G2707 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.6e-06 57.4 183 27.3
Ah.01g014380 Amaranthus hybridus HOM05D000876 ORTHO05D002662 2.1e-06 57.0 199 21.6
CSS0010034 Camellia sinensis var. sinensis HOM05D000876 ORTHO05D000285 2.1e-06 57.0 194 27.3
CSS0024396 Camellia sinensis var. sinensis HOM05D021170 ORTHO05D000285 2.1e-06 57.0 187 27.3
FAN09G4256 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.1e-06 57.0 183 27.3
FAN10G0150 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.1e-06 57.0 191 26.2
FAN17G0428 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.1e-06 57.0 183 27.3
RcHm_v2.0_Chr4g0428601 Rosa chinensis HOM05D000876 ORTHO05D000285 2.1e-06 57.0 219 24.7
Lj6g0013767 Lotus japonicus HOM05D000876 ORTHO05D000285 2.7e-06 56.6 186 25.3
COL.COLO4_20268 Corchorus olitorius HOM05D009321 ORTHO05D000285 3.6e-06 56.2 184 23.9
FAN05G1224 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.6e-06 56.2 183 27.3
Oeu051245.1 Olea europaea HOM05D000876 ORTHO05D000285 3.6e-06 56.2 193 24.4
Atru.chr3.1562 Acer truncatum HOM05D000876 ORTHO05D000285 4.6e-06 55.8 205 23.9
Atru.chr3.1584 Acer truncatum HOM05D000876 ORTHO05D000285 4.6e-06 55.8 205 23.9
Ciclev10031384m.g Citrus clementina HOM05D000876 ORTHO05D000285 4.6e-06 55.8 191 24.6
FvH4_6g39920 Fragaria vesca HOM05D000876 ORTHO05D000285 4.6e-06 55.8 183 26.8
FvH4_7g08972 Fragaria vesca HOM05D000876 ORTHO05D000285 4.6e-06 55.8 183 26.8
FAN02G3048 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.6e-06 55.8 183 26.8
FAN03G2155 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.6e-06 55.8 183 26.8
Rhsim06G0093500 Rhododendron simsii HOM05D000876 ORTHO05D000285 4.6e-06 55.8 188 28.7
SHI32444 Sapria himalayana HOM05D007516 ORTHO05D000285 4.6e-06 55.8 74 39.2
Hund26462 Selenicereus undatus HOM05D000876 ORTHO05D002662 4.6e-06 55.8 195 23.6
Atru.chr12.253 Acer truncatum HOM05D000876 ORTHO05D000285 6.1e-06 55.5 186 24.2
Oeu060831.2 Olea europaea HOM05D000876 ORTHO05D000285 7.9e-06 55.1 79 34.2
vmacro15102 Vaccinium macrocarpon HOM05D000113 ORTHO05D001798 7.9e-06 55.1 187 28.3
vmacro15904 Vaccinium macrocarpon HOM05D007516 ORTHO05D000285 7.9e-06 55.1 180 26.7


User provided reference genes

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