Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G1032 Trochodendron aralioides HOM05D005042 ORTHO05D006080 8.8e-221 770.0 396 100.0
TAR629G0517 Trochodendron aralioides HOM05D005042 ORTHO05D006080 1.4e-125 453.8 397 67.3
TAR726G0003 Trochodendron aralioides HOM05D005042 ORTHO05D006080 6.6e-91 338.6 342 61.1
Nn4g23527 Nelumbo nucifera HOM05D005042 ORTHO05D006080 5.6e-66 255.8 396 46.0
CSS0000751 Camellia sinensis var. sinensis HOM05D005042 ORTHO05D006080 5.4e-61 239.2 377 42.2
Dinv34024 Davidia involucrata HOM05D005042 ORTHO05D006080 1.3e-59 234.6 401 41.9
Dinv15584 Davidia involucrata HOM05D000485 ORTHO05D000341 7.1e-53 212.2 388 39.9
Cfa008851 Carpinus fangiana HOM05D005042 ORTHO05D006080 1.7e-51 207.6 348 44.5
Haze_11871 Corylus avellana HOM05D005042 ORTHO05D006080 5.6e-50 202.6 344 41.9
CiPaw.06G094600 Carya illinoinensis HOM05D005042 ORTHO05D006080 4.5e-47 193.0 357 41.2
GSVIVG01012257001 Vitis vinifera HOM05D005042 ORTHO05D006080 4.5e-47 193.0 370 39.5
Nn3g17525 Nelumbo nucifera HOM05D005042 ORTHO05D006080 9.9e-47 191.8 399 40.4
Potri.008G109100 Populus trichocarpa HOM05D005042 ORTHO05D006080 1.5e-42 177.9 379 36.9
Potri.T155180 Populus trichocarpa HOM05D005042 ORTHO05D006080 1.5e-42 177.9 379 36.9
Prupe.1G292900 Prunus persica HOM05D005042 ORTHO05D006080 1.5e-42 177.9 364 40.4
Rhsim09G0122700 Rhododendron simsii HOM05D005042 ORTHO05D006080 9.6e-42 175.3 373 36.7
Actinidia07770 Actinidia chinensis HOM05D005042 ORTHO05D006080 4.8e-41 172.9 372 37.1
Atru.chr11.1578 Acer truncatum HOM05D005042 ORTHO05D006080 2.6e-39 167.2 405 33.8
Thecc.02G323700 Theobroma cacao HOM05D005042 ORTHO05D006080 1.0e-38 165.2 291 40.2
vmacro10479 Vaccinium macrocarpon HOM05D005042 ORTHO05D006080 1.3e-38 164.9 339 38.6
TWI31G0262 Tripterygium wilfordii HOM05D005042 ORTHO05D006080 1.7e-38 164.5 387 37.0
TWI79G1206 Tripterygium wilfordii HOM05D005042 ORTHO05D006080 2.2e-38 164.1 374 35.3
MD16G1056300 Malus domestica HOM05D005042 ORTHO05D006080 6.5e-38 162.5 355 38.6
COL.COLO4_27818 Corchorus olitorius HOM05D005042 ORTHO05D006080 3.2e-37 160.2 350 35.7
Gorai.009G327100 Gossypium raimondii HOM05D005042 ORTHO05D006080 9.3e-37 158.7 345 36.5
Gohir.A05G306900 Gossypium hirsutum HOM05D005042 ORTHO05D006080 2.1e-36 157.5 364 34.6
Gohir.D05G307200 Gossypium hirsutum HOM05D005042 ORTHO05D006080 2.7e-36 157.1 345 36.5
Duzib251G0840 Durio zibethinus HOM05D005042 ORTHO05D006080 3.5e-36 156.8 335 36.4
Cpa.g.sc1.165 Carica papaya HOM05D005042 ORTHO05D006080 4.6e-36 156.4 398 33.2
Aqoxy3G03731 Aquilegia oxysepala HOM05D005042 ORTHO05D006080 7.9e-36 155.6 324 37.7
MBI16_g07040_MAGBIO Magnolia biondii HOM05D005042 ORTHO05D006080 1.0e-35 155.2 398 36.7
Sabra08G0082800 Salix brachista HOM05D005042 ORTHO05D006080 3.0e-35 153.7 380 34.2
Cc11_g11610 Coffea canephora HOM05D005042 ORTHO05D006080 5.1e-35 152.9 401 35.9
Rhsim12G0071400 Rhododendron simsii HOM05D005042 ORTHO05D006080 9.6e-34 148.7 353 35.7
CiPaw.05G122400 Carya illinoinensis HOM05D005042 ORTHO05D006080 1.3e-33 148.3 329 38.0
MD13G1056900 Malus domestica HOM05D005042 ORTHO05D006080 3.7e-33 146.7 383 35.5
Manes.01G025000 Manihot esculenta HOM05D005042 ORTHO05D006080 3.1e-32 143.7 408 30.9
Oeu057419.1 Olea europaea HOM05D005042 ORTHO05D006080 3.1e-32 143.7 238 42.0
Oeu024162.6 Olea europaea HOM05D005042 ORTHO05D006080 7.6e-31 139.0 378 33.9
Potri.010G139100 Populus trichocarpa HOM05D005042 ORTHO05D006080 5.0e-30 136.3 405 33.8
vmacro01299 Vaccinium macrocarpon HOM05D005042 ORTHO05D006080 5.0e-30 136.3 384 34.6
Oeu021807.1 Olea europaea HOM05D005042 ORTHO05D006080 9.3e-29 132.1 253 37.9
Ciclev10030834m.g Citrus clementina HOM05D005042 ORTHO05D006080 1.3e-27 128.3 403 30.5
Lj3A1027T86 Lonicera japonica HOM05D005042 ORTHO05D006080 1.8e-27 127.9 411 32.4
Sabra10G0107300 Salix brachista HOM05D005042 ORTHO05D006080 2.3e-27 127.5 386 33.2
RcHm_v2.0_Chr4g0437421 Rosa chinensis HOM05D005042 ORTHO05D006080 1.1e-26 125.2 370 34.6
Nitab4.5_0012072g0010 Nicotiana tabacum HOM05D005042 ORTHO05D006080 9.7e-26 122.1 350 32.9
Nitab4.5_0000027g0180 Nicotiana tabacum HOM05D005042 ORTHO05D006080 8.2e-25 119.0 237 38.8
FAN22G1919 Fragaria x ananassa HOM05D005042 ORTHO05D006080 6.9e-24 115.9 371 34.8
SGA_v2.0_scaffold287G47187 Striga asiatica HOM05D005042 ORTHO05D006080 6.9e-24 115.9 246 37.8
TPR.G38503 Trifolium pratense HOM05D005042 ORTHO05D006080 6.9e-24 115.9 235 42.6
Migut.E00252 Erythranthe guttata HOM05D005042 ORTHO05D006080 1.5e-23 114.8 219 35.2
EL10Ac6g14684 Beta vulgaris HOM05D005042 ORTHO05D006080 1.3e-22 111.7 190 42.6
Sc04g0007390 Simmondsia chinensis HOM05D005042 ORTHO05D006080 1.7e-22 111.3 246 38.6
FAN07G1705 Fragaria x ananassa HOM05D005042 ORTHO05D006080 8.5e-22 109.0 370 34.3
FAN17G2893 Fragaria x ananassa HOM05D005042 ORTHO05D006080 1.1e-21 108.6 323 36.2
PGR119G2532 Punica granatum HOM05D005042 ORTHO05D006080 1.9e-21 107.8 375 30.1
FvH4_4g29350 Fragaria vesca HOM05D005042 ORTHO05D006080 3.2e-21 107.1 345 36.2
Peaxi162Scf00188g01341 Petunia axillaris HOM05D005042 ORTHO05D006080 5.5e-21 106.3 236 35.2
PGSC0003DMG400028304 Solanum tuberosum HOM05D005042 ORTHO05D006080 5.5e-21 106.3 245 36.7
CAN.G1021.3 Capsicum annuum HOM05D005042 ORTHO05D006080 9.4e-21 105.5 248 36.3
Ca_05058_v3 Cicer arietinum L. HOM05D005042 ORTHO05D006080 9.4e-21 105.5 235 38.7
Sopen05g006670 Solanum pennellii HOM05D005042 ORTHO05D006080 9.4e-21 105.5 237 35.9
Solyc05g011930.4 Solanum lycopersicum HOM05D005042 ORTHO05D006080 2.1e-20 104.4 237 35.9
Eucgr.G02425 Eucalyptus grandis HOM05D005042 ORTHO05D006080 2.7e-20 104.0 231 35.1
Hund25158 Selenicereus undatus HOM05D005042 ORTHO05D006080 3.6e-20 103.6 316 32.6
FAN12G1549 Fragaria x ananassa HOM05D005042 ORTHO05D006080 6.1e-20 102.8 283 38.5
Glyma.02G122200 Glycine max HOM05D005042 ORTHO05D006080 1.0e-19 102.1 348 33.0
CANSAT11G1456 Cannabis sativa HOM05D005042 ORTHO05D006080 8.8e-19 99.0 334 30.5
Ah.03g138660 Amaranthus hybridus HOM05D000485 ORTHO05D000341 1.1e-18 98.6 233 35.6
ECA246G3902 Erigeron canadensis HOM05D005042 ORTHO05D006080 9.7e-18 95.5 217 35.5
PSO782G3512 Papaver somniferum HOM05D005042 ORTHO05D006080 6.3e-17 92.8 364 30.5
PSO017G3437 Papaver somniferum HOM05D005042 ORTHO05D006080 1.1e-16 92.0 384 28.6
Manes.14G088800 Manihot esculenta HOM05D005042 ORTHO05D006080 6.9e-16 89.4 272 34.9
Lalb_Chr17g0341431 Lupinus albus HOM05D005042 ORTHO05D006080 1.5e-15 88.2 299 30.1
HanXRQChr17g0570091 Helianthus annuus HOM05D005042 ORTHO05D006080 3.4e-15 87.0 257 31.1
THA.LOC104821992 Tarenaya hassleriana HOM05D005042 ORTHO05D006080 5.9e-15 86.3 402 28.1
PSO063G2731 Papaver somniferum HOM05D005042 ORTHO05D006080 1.0e-14 85.5 422 27.5
Psat2g093520 Pisum sativum HOM05D005042 ORTHO05D006080 1.0e-14 85.5 272 34.6
ATR0827G068 Amborella trichopoda HOM05D005042 ORTHO05D006080 1.3e-14 85.1 276 31.9
Phvul.003G038600 Phaseolus vulgaris HOM05D005042 ORTHO05D006080 1.4e-13 81.6 287 33.1
Glyma.01G064400 Glycine max HOM05D005042 ORTHO05D006080 1.9e-13 81.3 348 32.8
Lalb_Chr10g0099121 Lupinus albus HOM05D005042 ORTHO05D006080 4.2e-13 80.1 284 29.2
arahy.Tifrunner.gnm1.ann1.6TZ00L Arachis hypogaea HOM05D005042 ORTHO05D006080 7.2e-13 79.3 357 31.4
Sp5g24160 Schrenkiella parvula HOM05D005042 ORTHO05D006080 1.2e-12 78.6 306 28.8
Lsat_1_v5_gn_3_106381 Lactuca sativa HOM05D005042 ORTHO05D006080 1.8e-11 74.7 208 33.7
TPR.G37754 Trifolium pratense HOM05D005042 ORTHO05D006080 2.3e-11 74.3 265 31.7
AT1G69060 Arabidopsis thaliana HOM05D005042 ORTHO05D006080 3.9e-11 73.6 220 30.5
PSO478G2238 Papaver somniferum HOM05D005042 ORTHO05D006080 5.1e-11 73.2 387 25.6
ClCG08G010560 Citrullus lanatus HOM05D005042 ORTHO05D006080 1.1e-10 72.0 223 31.8
CsaV3_6G033840 Cucumis sativus L. HOM05D005042 ORTHO05D006080 1.1e-10 72.0 222 31.5
Thhalv10018302m.g Eutrema salsugineum HOM05D005042 ORTHO05D006080 1.1e-10 72.0 238 29.8
arahy.Tifrunner.gnm1.ann1.U4ZHW1 Arachis hypogaea HOM05D005042 ORTHO05D006080 2.0e-10 71.2 365 29.3
AUR62003064 Chenopodium quinoa HOM05D005042 ORTHO05D006080 2.2e-09 67.8 215 33.0
AL2G28110 Arabidopsis lyrata HOM05D005042 ORTHO05D006080 2.8e-09 67.4 180 32.8
AUR62007879 Chenopodium quinoa HOM05D005042 ORTHO05D006080 6.3e-09 66.2 167 37.1
Medtr5g047140 Medicago truncatula HOM05D005042 ORTHO05D006080 6.3e-09 66.2 254 33.1
MELO3C011406.2 Cucumis melo HOM05D005042 ORTHO05D006080 1.4e-08 65.1 222 29.3
Carub.0002s1568 Capsella rubella HOM05D005042 ORTHO05D006080 1.8e-08 64.7 377 26.5
Lsat_1_v5_gn_4_25561 Lactuca sativa HOM05D005042 ORTHO05D006080 2.4e-08 64.3 212 25.9
DCAR_007205 Daucus carota HOM05D005042 ORTHO05D006080 3.1e-08 63.9 273 28.9
BraA07t31136Z Brassica rapa HOM05D005042 ORTHO05D006080 1.5e-07 61.6 197 32.0
DCAR_030054 Daucus carota HOM05D005042 ORTHO05D006080 2.6e-07 60.8 185 29.7
CDE10G0071 Ceratophyllum demersum HOM05D005042 ORTHO05D006080 1.7e-06 58.2 263 27.8
Sed0017498 Sechium edule HOM05D005042 ORTHO05D006080 1.7e-06 58.2 272 27.6
A07p35450 Brassica napus HOM05D005042 ORTHO05D006080 5.0e-06 56.6 243 29.6
CDE10G0431 Ceratophyllum demersum HOM05D005042 ORTHO05D006080 6.5e-06 56.2 194 29.4
Aa31LG4G11790 Aethionema arabicum HOM05D005042 ORTHO05D006080 8.5e-06 55.8 329 27.7


User provided reference genes

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