Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G1028 Trochodendron aralioides HOM05D005577 ORTHO05D006941 3.7e-230 801.2 406 100.0
GSVIVG01029087001 Vitis vinifera HOM05D005577 ORTHO05D006941 8.7e-131 471.1 448 60.7
Nn3g16413 Nelumbo nucifera HOM05D005577 ORTHO05D006941 5.6e-130 468.4 446 60.5
Ah.03g135990 Amaranthus hybridus HOM05D005577 ORTHO05D006941 1.8e-128 463.4 428 60.0
Hund25478 Selenicereus undatus HOM05D005577 ORTHO05D006941 8.4e-126 454.5 449 57.5
Duzib248G1391 Durio zibethinus HOM05D005577 ORTHO05D006941 1.4e-125 453.8 447 58.4
Rhsim12G0094300 Rhododendron simsii HOM05D005577 ORTHO05D006941 5.5e-125 451.8 461 57.0
AUR62028904 Chenopodium quinoa HOM05D005577 ORTHO05D006941 2.7e-124 449.5 407 60.9
Thecc.02G202700 Theobroma cacao HOM05D005577 ORTHO05D006941 1.3e-123 447.2 447 57.5
Gohir.D02G146900 Gossypium hirsutum HOM05D005577 ORTHO05D006941 1.8e-123 446.8 447 57.0
Gohir.A03G117000 Gossypium hirsutum HOM05D005577 ORTHO05D006941 3.0e-123 446.0 447 56.6
CSS0033060 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 8.7e-123 444.5 446 58.7
Cfa009383 Carpinus fangiana HOM05D005577 ORTHO05D006941 8.7e-123 444.5 447 56.6
Gorai.005G164500 Gossypium raimondii HOM05D005577 ORTHO05D006941 8.7e-123 444.5 447 56.8
Manes.13G009300 Manihot esculenta HOM05D005577 ORTHO05D006941 1.1e-122 444.1 446 56.7
TWI36G1278 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 1.1e-122 444.1 446 57.2
EL10Ac6g13532 Beta vulgaris HOM05D005577 ORTHO05D006941 1.3e-121 440.7 451 56.3
QL03p051875 Quercus lobata HOM05D005577 ORTHO05D006941 1.6e-121 440.3 457 56.0
Haze_12444 Corylus avellana HOM05D005577 ORTHO05D006941 2.1e-121 439.9 471 53.9
AUR62005646 Chenopodium quinoa HOM05D005577 ORTHO05D006941 3.7e-121 439.1 397 60.5
Sopen04g017360 Solanum pennellii HOM05D005577 ORTHO05D006941 6.2e-121 438.3 447 55.9
CSS0039862 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 8.2e-121 438.0 448 57.6
Glyma.05G148900 Glycine max HOM05D005577 ORTHO05D006941 1.1e-120 437.6 452 54.9
Potri.003G169300 Populus trichocarpa HOM05D005577 ORTHO05D006941 1.8e-120 436.8 450 57.3
Glyma.08G105600 Glycine max HOM05D005577 ORTHO05D006941 3.1e-120 436.0 452 55.1
Ciclev10031511m.g Citrus clementina HOM05D005577 ORTHO05D006941 4.0e-120 435.6 449 55.9
Peaxi162Scf00128g01539 Petunia axillaris HOM05D005577 ORTHO05D006941 5.3e-120 435.3 447 55.7
Sc11g0000360 Simmondsia chinensis HOM05D005577 ORTHO05D006941 1.2e-119 434.1 447 56.4
Aqoxy5G03309 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 1.5e-119 433.7 449 55.9
CiPaw.06G104800 Carya illinoinensis HOM05D005577 ORTHO05D006941 2.6e-119 433.0 446 54.5
Eucgr.H04616 Eucalyptus grandis HOM05D005577 ORTHO05D006941 4.5e-119 432.2 446 56.1
MSTRG.487 Avicennia marina HOM05D005577 ORTHO05D006941 1.0e-118 431.0 449 54.3
Medtr8g097160 Medicago truncatula HOM05D005577 ORTHO05D006941 1.7e-118 430.3 451 54.8
TPR.G26572 Trifolium pratense HOM05D005577 ORTHO05D006941 4.9e-118 428.7 451 54.8
PSO017G5787 Papaver somniferum HOM05D005577 ORTHO05D006941 8.4e-118 427.9 447 53.9
COL.COLO4_20442 Corchorus olitorius HOM05D005577 ORTHO05D006941 1.1e-117 427.6 436 56.9
Ca_18016_v3 Cicer arietinum L. HOM05D005577 ORTHO05D006941 1.4e-117 427.2 451 54.8
Dinv11687 Davidia involucrata HOM05D005577 ORTHO05D006941 1.4e-117 427.2 418 58.6
Phvul.L003546 Phaseolus vulgaris HOM05D005577 ORTHO05D006941 2.5e-117 426.4 452 54.0
ATR0561G025 Amborella trichopoda HOM05D005577 ORTHO05D006941 4.2e-117 425.6 447 54.6
Nitab4.5_0001010g0020 Nicotiana tabacum HOM05D005577 ORTHO05D006941 5.5e-117 425.2 446 55.2
CsaV3_6G008170 Cucumis sativus L. HOM05D005577 ORTHO05D006941 7.1e-117 424.9 447 54.8
MD13G1121900 Malus domestica HOM05D005577 ORTHO05D006941 7.1e-117 424.9 447 54.6
vmacro17973 Vaccinium macrocarpon HOM05D005577 ORTHO05D006941 1.6e-116 423.7 498 52.2
Nitab4.5_0008235g0010 Nicotiana tabacum HOM05D005577 ORTHO05D006941 2.7e-116 422.9 446 54.7
DCAR_024669 Daucus carota HOM05D005577 ORTHO05D006941 3.5e-116 422.5 477 51.6
Lj6A829T30 Lonicera japonica HOM05D005577 ORTHO05D006941 7.9e-116 421.4 474 53.6
SalBow2G2693 Salvia bowleyana HOM05D005577 ORTHO05D006941 1.0e-115 421.0 450 54.7
CANSAT01G0699 Cannabis sativa HOM05D005577 ORTHO05D006941 1.3e-115 420.6 447 54.6
Migut.K00987 Erythranthe guttata HOM05D005577 ORTHO05D006941 1.8e-115 420.2 449 53.2
Lsat_1_v5_gn_2_63520 Lactuca sativa HOM05D005577 ORTHO05D006941 8.7e-115 417.9 440 53.2
Thhalv10018528m.g Eutrema salsugineum HOM05D005577 ORTHO05D006941 1.1e-114 417.5 447 51.5
TAR629G1549 Trochodendron aralioides HOM05D005577 ORTHO05D006941 1.5e-114 417.2 320 71.2
Hma1.2p1_0065F.1_g035160 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 9.7e-114 414.5 445 54.8
BcaB03g15345 Brassica carinata HOM05D005577 ORTHO05D006941 1.3e-113 414.1 448 51.1
Sp5g22260 Schrenkiella parvula HOM05D005577 ORTHO05D006941 1.6e-113 413.7 448 50.9
arahy.Tifrunner.gnm1.ann1.HTD3J8 Arachis hypogaea HOM05D005577 ORTHO05D006941 2.2e-113 413.3 455 51.9
arahy.Tifrunner.gnm1.ann1.V9CB21 Arachis hypogaea HOM05D005577 ORTHO05D006941 2.8e-113 412.9 455 51.6
FAN12G2046 Fragaria x ananassa HOM05D005577 ORTHO05D006941 2.8e-113 412.9 430 54.4
A02p14150 Brassica napus HOM05D005577 ORTHO05D006941 3.7e-113 412.5 448 51.3
C02p22860 Brassica napus HOM05D005577 ORTHO05D006941 4.8e-113 412.1 448 51.1
FAN07G0551 Fragaria x ananassa HOM05D005577 ORTHO05D006941 8.2e-113 411.4 430 54.7
RcHm_v2.0_Chr4g0418271 Rosa chinensis HOM05D005577 ORTHO05D006941 1.4e-112 410.6 439 54.2
FAN22G0128 Fragaria x ananassa HOM05D005577 ORTHO05D006941 9.0e-112 407.9 430 54.4
Lalb_Chr07g0187001 Lupinus albus HOM05D005577 ORTHO05D006941 9.0e-112 407.9 442 52.0
Lj4g0002319 Lotus japonicus HOM05D005577 ORTHO05D006941 1.5e-111 407.1 453 52.1
Manes.12G008900 Manihot esculenta HOM05D005577 ORTHO05D006941 1.5e-111 407.1 380 60.5
Oeu058914.1 Olea europaea HOM05D005577 ORTHO05D006941 3.4e-111 406.0 466 51.1
Carub.0002s1360 Capsella rubella HOM05D005577 ORTHO05D006941 7.7e-111 404.8 448 50.9
Zm00001eb421110 Zea mays HOM05D005577 ORTHO05D006941 1.0e-110 404.4 449 51.9
TWI75G1135 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 1.3e-110 404.1 380 60.5
Os07g0406800 Oryza sativa ssp. japonica HOM05D005577 ORTHO05D006941 5.0e-110 402.1 454 51.8
THA.LOC104807138 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 8.5e-110 401.4 446 50.2
AL2G25840 Arabidopsis lyrata HOM05D005577 ORTHO05D006941 1.1e-109 401.0 450 51.1
BolC2t08435H Brassica oleracea HOM05D005577 ORTHO05D006941 2.5e-109 399.8 468 48.9
Solyc04g045530.4 Solanum lycopersicum HOM05D005577 ORTHO05D006941 2.5e-109 399.8 381 59.3
BraA02t06478Z Brassica rapa HOM05D005577 ORTHO05D006941 7.2e-109 398.3 477 48.2
Prupe.1G223400 Prunus persica HOM05D005577 ORTHO05D006941 1.6e-108 397.1 426 54.9
BraA07t30887Z Brassica rapa HOM05D005577 ORTHO05D006941 2.1e-108 396.7 467 48.4
Sabra03G0124100 Salix brachista HOM05D005577 ORTHO05D006941 2.1e-108 396.7 482 51.9
CDE05G3041 Ceratophyllum demersum HOM05D005577 ORTHO05D006941 2.7e-108 396.4 460 50.9
AT1G67320 Arabidopsis thaliana HOM05D005577 ORTHO05D006941 3.6e-108 396.0 448 50.4
A07p32630 Brassica napus HOM05D005577 ORTHO05D006941 4.6e-108 395.6 459 49.5
THA.LOC104825491 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 1.0e-107 394.4 446 50.2
Actinidia09628 Actinidia chinensis HOM05D005577 ORTHO05D006941 2.3e-107 393.3 381 58.8
CARHR059800 Cardamine hirsuta HOM05D005577 ORTHO05D006941 2.3e-107 393.3 437 50.8
HanXRQChr12g0354651 Helianthus annuus HOM05D005577 ORTHO05D006941 5.1e-107 392.1 450 51.3
Cc11_g17150 Coffea canephora HOM05D005577 ORTHO05D006941 2.0e-106 390.2 381 58.5
MELO3C022319.2 Cucumis melo HOM05D005577 ORTHO05D006941 2.0e-106 390.2 381 58.3
Sed0021319 Sechium edule HOM05D005577 ORTHO05D006941 2.0e-106 390.2 381 56.7
unitig_699.g19962 Utricularia gibba HOM05D005577 ORTHO05D006941 3.3e-106 389.4 481 47.8
HanXRQChr12g0357271 Helianthus annuus HOM05D005577 ORTHO05D006941 5.7e-106 388.7 450 51.3
ECA233G0246 Erigeron canadensis HOM05D005577 ORTHO05D006941 1.4e-104 384.0 437 50.1
BcaC03g14832 Brassica carinata HOM05D005577 ORTHO05D006941 1.3e-102 377.5 382 53.9
FvH4_4g14550 Fragaria vesca HOM05D005577 ORTHO05D006941 2.2e-102 376.7 359 58.2
Cpa.g.sc43.82 Carica papaya HOM05D005577 ORTHO05D006941 2.5e-101 373.2 427 51.5
SGA_v2.0_scaffold114G31915 Striga asiatica HOM05D005577 ORTHO05D006941 2.5e-101 373.2 468 48.9
HPP92_020263 Vanilla planifolia HOM05D005577 ORTHO05D006941 3.2e-101 372.9 380 55.5
SEGI_29210 Sequoiadendron giganteum HOM05D005577 ORTHO05D006941 6.1e-100 368.6 430 48.4
Hma1.2p1_0065F.1_g035170 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 3.0e-99 366.3 322 63.0
QL02p017501 Quercus lobata HOM05D005577 ORTHO05D006941 6.3e-97 358.6 414 52.2
ClCG06G002100 Citrullus lanatus HOM05D005577 ORTHO05D006941 3.5e-95 352.8 457 48.1
Zm00001eb407100 Zea mays HOM05D005577 ORTHO05D006941 2.7e-92 343.2 320 57.8
CAN.G97.33 Capsicum annuum HOM05D005577 ORTHO05D006941 1.9e-85 320.5 385 50.6
Aa31LG2G15630 Aethionema arabicum HOM05D005577 ORTHO05D006941 1.8e-83 313.9 457 42.5
BcaB05g24262 Brassica carinata HOM05D005577 ORTHO05D006941 2.9e-78 296.6 457 42.5
Psat7g076760 Pisum sativum HOM05D005577 ORTHO05D006941 3.8e-78 296.2 273 59.0
SMO340G0130 Selaginella moellendorffii HOM05D005577 ORTHO05D006941 8.5e-78 295.0 417 43.2
Mapoly0051s0085 Marchantia polymorpha HOM05D005577 ORTHO05D006941 4.7e-76 289.3 376 44.7
AagrBONN_evm.TU.Sc2ySwM_362.1325 Anthoceros agrestis HOM05D005577 ORTHO05D006941 9.8e-74 281.6 377 43.2
CBR_g45479 Chara braunii HOM05D005577 ORTHO05D006941 1.2e-68 264.6 366 41.5
Pp3c17_16180 Physcomitrium patens HOM05D005577 ORTHO05D006941 6.1e-68 262.3 427 37.2
Aqoxy7G01339 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 1.2e-60 238.0 218 60.6
MCO02G430 Micromonas commoda HOM05D005577 ORTHO05D006941 8.0e-52 208.8 434 32.0
PRCOL_00003669 Prasinoderma coloniale HOM05D005577 ORTHO05D006941 4.1e-48 196.4 417 33.3
Atru.chr11.2353 Acer truncatum HOM05D005577 ORTHO05D006941 7.3e-45 185.7 124 77.4
MD09G1083700 Malus domestica HOM05D005577 ORTHO05D006941 2.6e-42 177.2 223 48.0
Cre06.g293000 Chlamydomonas reinhardtii HOM05D005577 ORTHO05D006941 2.7e-31 140.6 266 35.3
QL03p057485 Quercus lobata HOM05D005577 ORTHO05D006941 2.7e-31 140.6 223 43.9
MD16G1122200 Malus domestica HOM05D005577 ORTHO05D006941 4.3e-29 133.3 260 38.8
Psat7g076800 Pisum sativum HOM05D005577 ORTHO05D006941 5.6e-29 132.9 188 45.2
RcHm_v2.0_Chr4g0417231 Rosa chinensis HOM05D005577 ORTHO05D006941 1.5e-26 124.8 137 52.6
RcHm_v2.0_Chr4g0417261 Rosa chinensis HOM05D005577 ORTHO05D006941 1.5e-26 124.8 296 32.1
Atru.chr11.2352 Acer truncatum HOM05D005577 ORTHO05D006941 1.5e-18 98.2 79 62.0
Lsat_1_v5_gn_0_16180 Lactuca sativa HOM05D005577 ORTHO05D006941 2.9e-17 94.0 138 43.5
SHI17983 Sapria himalayana HOM05D005577 ORTHO05D006941 1.4e-16 91.7 71 63.4
Atru.chr11.2354 Acer truncatum HOM05D005577 ORTHO05D006941 1.2e-15 88.6 66 71.2
SHI17981 Sapria himalayana HOM05D005577 ORTHO05D006941 2.3e-14 84.3 56 76.8
QL10p065845 Quercus lobata HOM05D000176 ORTHO05D000106 9.0e-11 72.4 51 62.7
A10p10750 Brassica napus HOM05D005577 ORTHO05D006941 7.6e-10 69.3 36 80.6
Dinv17584 Davidia involucrata HOM05D005577 ORTHO05D006941 1.7e-09 68.2 105 42.9
RcHm_v2.0_Chr4g0417241 Rosa chinensis HOM05D005577 ORTHO05D006941 4.9e-09 66.6 37 78.4
SHI17980 Sapria himalayana HOM05D005577 ORTHO05D006941 8.4e-09 65.9 36 77.8
MD16G1122100 Malus domestica HOM05D005577 ORTHO05D006941 7.1e-08 62.8 32 81.2
Potri.017G053801 Populus trichocarpa HOM05D005577 ORTHO05D006941 3.9e-06 57.0 51 52.9
SHI17982 Sapria himalayana HOM05D005577 ORTHO05D006941 5.1e-06 56.6 47 59.6


User provided reference genes

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