Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G1018 Trochodendron aralioides HOM05D006882 ORTHO05D008688 2.0e-74 282.3 144 100.0
Dinv34941 Davidia involucrata HOM05D006882 ORTHO05D008688 4.0e-30 135.2 101 69.3
GSVIVG01032906001 Vitis vinifera HOM05D006882 ORTHO05D008688 1.7e-28 129.8 104 65.4
Atru.chr8.430 Acer truncatum HOM05D006882 ORTHO05D008688 1.9e-27 126.3 101 67.3
CiPaw.03G088500 Carya illinoinensis HOM05D006882 ORTHO05D008688 3.5e-26 122.1 103 61.2
MD17G1059700 Malus domestica HOM05D006882 ORTHO05D008688 4.6e-26 121.7 105 61.9
QL02p067584 Quercus lobata HOM05D006882 ORTHO05D008688 2.3e-25 119.4 103 59.2
MD09G1066800 Malus domestica HOM05D006882 ORTHO05D008688 3.9e-25 118.6 106 60.4
COL.COLO4_04934 Corchorus olitorius HOM05D006882 ORTHO05D008688 1.1e-24 117.1 100 62.0
Duzib187G0261 Durio zibethinus HOM05D006882 ORTHO05D008688 9.6e-24 114.0 99 61.6
CANSAT64G2010 Cannabis sativa HOM05D006882 ORTHO05D008688 6.2e-23 111.3 107 58.9
Prupe.3G254900 Prunus persica HOM05D006882 ORTHO05D008688 6.2e-23 111.3 87 63.2
Sabra17G0083000 Salix brachista HOM05D006882 ORTHO05D008688 8.1e-23 110.9 108 52.8
Dinv33828 Davidia involucrata HOM05D006882 ORTHO05D008688 3.1e-22 109.0 69 78.3
Manes.01G096000 Manihot esculenta HOM05D006882 ORTHO05D008688 3.1e-22 109.0 111 54.1
Thecc.04G095700 Theobroma cacao HOM05D006882 ORTHO05D008688 3.1e-22 109.0 95 63.2
Haze_14430 Corylus avellana HOM05D006882 ORTHO05D008688 5.2e-22 108.2 98 58.2
PGR004G1649 Punica granatum HOM05D006882 ORTHO05D008688 5.2e-22 108.2 99 55.6
Potri.017G094200 Populus trichocarpa HOM05D006882 ORTHO05D008688 6.9e-22 107.8 108 51.9
Rhsim10G0049600 Rhododendron simsii HOM05D006882 ORTHO05D008688 5.8e-21 104.8 101 58.4
RcHm_v2.0_Chr2g0165841 Rosa chinensis HOM05D006882 ORTHO05D008688 5.8e-21 104.8 96 60.4
Cfa007668 Carpinus fangiana HOM05D006882 ORTHO05D008688 7.6e-21 104.4 98 57.1
Glyma.13G056500 Glycine max HOM05D006882 ORTHO05D008688 7.6e-21 104.4 100 58.0
Duzib147G0673 Durio zibethinus HOM05D006882 ORTHO05D008688 1.7e-20 103.2 102 57.8
Gorai.007G082700 Gossypium raimondii HOM05D006882 ORTHO05D008688 2.9e-20 102.4 100 58.0
FvH4_6g46850 Fragaria vesca HOM05D006882 ORTHO05D008688 3.8e-20 102.1 89 60.7
FAN09G3572 Fragaria x ananassa HOM05D006882 ORTHO05D008688 3.8e-20 102.1 89 60.7
FAN14G0989 Fragaria x ananassa HOM05D006882 ORTHO05D008688 3.8e-20 102.1 89 60.7
Cc07_g04230 Coffea canephora HOM05D006882 ORTHO05D008688 6.4e-20 101.3 106 56.6
Potri.004G120200 Populus trichocarpa HOM05D006882 ORTHO05D008688 1.1e-19 100.5 66 69.7
Duzib264G0735 Durio zibethinus HOM05D006882 ORTHO05D008688 1.4e-19 100.1 95 58.9
vmacro05638 Vaccinium macrocarpon HOM05D006882 ORTHO05D008688 1.4e-19 100.1 100 59.0
FAN05G2472 Fragaria x ananassa HOM05D006882 ORTHO05D008688 1.9e-19 99.8 89 59.6
Gohir.D11G077000 Gossypium hirsutum HOM05D006882 ORTHO05D008688 1.9e-19 99.8 100 57.0
FAN02G1963 Fragaria x ananassa HOM05D006882 ORTHO05D008688 2.4e-19 99.4 89 59.6
Hma1.2p1_0481F.1_g162213 Hydrangea macrophylla HOM05D006882 ORTHO05D008688 3.2e-19 99.0 94 60.6
Glyma.01G085200 Glycine max HOM05D006882 ORTHO05D008688 4.2e-19 98.6 99 57.6
Lalb_Chr06g0174961 Lupinus albus HOM05D006882 ORTHO05D008688 5.4e-19 98.2 91 58.2
Gohir.A11G072700 Gossypium hirsutum HOM05D006882 ORTHO05D008688 2.7e-18 95.9 100 55.0
Phvul.004G037300 Phaseolus vulgaris HOM05D006882 ORTHO05D008688 2.7e-18 95.9 104 54.8
Eucgr.I02034 Eucalyptus grandis HOM05D006882 ORTHO05D008688 3.5e-18 95.5 110 51.8
Glyma.19G030100 Glycine max HOM05D006882 ORTHO05D008688 3.5e-18 95.5 100 56.0
arahy.Tifrunner.gnm1.ann1.YR6PCG Arachis hypogaea HOM05D006882 ORTHO05D008688 6.0e-18 94.7 108 50.0
Aqoxy3G00507 Aquilegia oxysepala HOM05D006882 ORTHO05D008688 7.8e-18 94.4 92 57.6
arahy.Tifrunner.gnm1.ann1.PJ6ZH1 Arachis hypogaea HOM05D006882 ORTHO05D008688 1.0e-17 94.0 108 50.0
Manes.02G055100 Manihot esculenta HOM05D006882 ORTHO05D008688 1.3e-17 93.6 106 50.9
Oeu062161.1 Olea europaea HOM05D006882 ORTHO05D008688 2.3e-17 92.8 109 53.2
DCAR_025431 Daucus carota HOM05D006882 ORTHO05D008688 3.9e-17 92.0 98 52.0
VMungo0464G1672 Vigna mungo HOM05D006882 ORTHO05D008688 8.7e-17 90.9 99 51.5
TWI60G1503 Tripterygium wilfordii HOM05D006882 ORTHO05D008688 1.1e-16 90.5 113 52.2
MBI16_g10826_MAGBIO Magnolia biondii HOM05D006882 ORTHO05D008688 4.3e-16 88.6 85 54.1
MSTRG.23884 Avicennia marina HOM05D006882 ORTHO05D008688 9.6e-16 87.4 115 45.2
Lj2g0004633 Lotus japonicus HOM05D006882 ORTHO05D008688 9.6e-16 87.4 102 51.0
CARHR076080 Cardamine hirsuta HOM05D006882 ORTHO05D008688 2.1e-15 86.3 107 47.7
Sp3g01180 Schrenkiella parvula HOM05D006882 ORTHO05D008688 4.8e-15 85.1 107 47.7
Carub.0003s0123 Capsella rubella HOM05D006882 ORTHO05D008688 6.2e-15 84.7 107 50.5
AL3G11350 Arabidopsis lyrata HOM05D006882 ORTHO05D008688 8.1e-15 84.3 108 48.1
Psat1g068840 Pisum sativum HOM05D006882 ORTHO05D008688 1.4e-14 83.6 113 43.4
BcaB07g32783 Brassica carinata HOM05D006882 ORTHO05D008688 1.8e-14 83.2 107 47.7
Ca_04305_v3 Cicer arietinum L. HOM05D006882 ORTHO05D008688 1.8e-14 83.2 101 49.5
MSTRG.2998 Avicennia marina HOM05D006882 ORTHO05D008688 2.4e-14 82.8 108 50.0
TPR.G10007 Trifolium pratense HOM05D006882 ORTHO05D008688 2.4e-14 82.8 112 46.4
Aa31LG5G12650 Aethionema arabicum HOM05D006882 ORTHO05D008688 3.1e-14 82.4 108 49.1
THA.LOC104822332 Tarenaya hassleriana HOM05D006882 ORTHO05D008688 3.1e-14 82.4 58 69.0
Ciclev10003470m.g Citrus clementina HOM05D006882 ORTHO05D008688 1.2e-13 80.5 67 62.7
Ciclev10027312m.g Citrus clementina HOM05D006882 ORTHO05D008688 1.2e-13 80.5 58 70.7
AT3G02120 Arabidopsis thaliana HOM05D006882 ORTHO05D008688 1.5e-13 80.1 85 50.6
BcaC05g27151 Brassica carinata HOM05D006882 ORTHO05D008688 1.5e-13 80.1 81 54.3
C05p30380 Brassica napus HOM05D006882 ORTHO05D008688 1.5e-13 80.1 81 54.3
BolC5t31777H Brassica oleracea HOM05D006882 ORTHO05D008688 1.5e-13 80.1 81 54.3
Medtr6g015280 Medicago truncatula HOM05D006882 ORTHO05D008688 1.5e-13 80.1 65 63.1
A09p35030 Brassica napus HOM05D006882 ORTHO05D008688 3.4e-13 79.0 114 44.7
Ciclev10003349m.g Citrus clementina HOM05D006882 ORTHO05D008688 4.5e-13 78.6 58 69.0
Gohir.D09G008650 Gossypium hirsutum HOM05D006882 ORTHO05D008688 4.5e-13 78.6 81 53.1
Peaxi162Scf00166g00424 Petunia axillaris HOM05D006882 ORTHO05D008688 4.5e-13 78.6 60 65.0
Sc14g0006330 Simmondsia chinensis HOM05D006882 ORTHO05D008688 4.5e-13 78.6 94 46.8
Migut.H00624 Erythranthe guttata HOM05D006882 ORTHO05D008688 7.6e-13 77.8 94 47.9
Gorai.006G010400 Gossypium raimondii HOM05D006882 ORTHO05D008688 7.6e-13 77.8 81 53.1
Medtr6g015260 Medicago truncatula HOM05D006882 ORTHO05D008688 7.6e-13 77.8 74 55.4
SalBow1G1386 Salvia bowleyana HOM05D006882 ORTHO05D008688 7.6e-13 77.8 81 50.6
SalBow1G4555 Salvia bowleyana HOM05D006882 ORTHO05D008688 7.6e-13 77.8 81 50.6
TWI34G0355 Tripterygium wilfordii HOM05D006882 ORTHO05D008688 9.9e-13 77.4 105 47.6
HanXRQChr07g0199771 Helianthus annuus HOM05D006882 ORTHO05D008688 1.3e-12 77.0 72 58.3
PSO017G6201 Papaver somniferum HOM05D006882 ORTHO05D008688 1.3e-12 77.0 78 55.1
BraA09t39034Z Brassica rapa HOM05D006882 ORTHO05D008688 1.7e-12 76.6 114 40.4
Ciclev10013137m.g Citrus clementina HOM05D006882 ORTHO05D008688 1.7e-12 76.6 59 71.2
PGSC0003DMG400001358 Solanum tuberosum HOM05D006882 ORTHO05D008688 2.2e-12 76.3 52 73.1
Nn1g08730 Nelumbo nucifera HOM05D006882 ORTHO05D008688 4.9e-12 75.1 57 57.9
Solyc02g088830.4 Solanum lycopersicum HOM05D006882 ORTHO05D008688 4.9e-12 75.1 50 74.0
Sopen02g033540 Solanum pennellii HOM05D006882 ORTHO05D008688 4.9e-12 75.1 50 74.0
Nitab4.5_0003841g0040 Nicotiana tabacum HOM05D006882 ORTHO05D008688 1.4e-11 73.6 100 48.0
Ah.12g062710 Amaranthus hybridus HOM05D006882 ORTHO05D008688 2.4e-11 72.8 88 43.2
AUR62038673 Chenopodium quinoa HOM05D006882 ORTHO05D008688 3.2e-11 72.4 53 67.9
Lsat_1_v5_gn_2_90100 Lactuca sativa HOM05D006882 ORTHO05D008688 3.2e-11 72.4 71 57.7
Hund13139 Selenicereus undatus HOM05D006882 ORTHO05D008688 4.2e-11 72.0 96 46.9
Cpa.g.sc14.176 Carica papaya HOM05D006882 ORTHO05D008688 9.3e-11 70.9 92 46.7
CsaV3_4G009150 Cucumis sativus L. HOM05D006882 ORTHO05D008688 9.3e-11 70.9 56 60.7
AUR62018188 Chenopodium quinoa HOM05D006882 ORTHO05D008688 1.2e-10 70.5 47 70.2
Sed0003732 Sechium edule HOM05D006882 ORTHO05D008688 1.2e-10 70.5 56 58.9
ECA238G0863 Erigeron canadensis HOM05D006882 ORTHO05D008688 1.6e-10 70.1 79 50.6
ClCG07G016320 Citrullus lanatus HOM05D006882 ORTHO05D008688 4.6e-10 68.6 56 60.7
Gohir.A09G009600 Gossypium hirsutum HOM05D006882 ORTHO05D008688 6.0e-10 68.2 100 44.0
ATR0177G043 Amborella trichopoda HOM05D006882 ORTHO05D008688 7.9e-10 67.8 106 46.2
Peaxi162Scf00298g00055 Petunia axillaris HOM05D006882 ORTHO05D008688 1.3e-09 67.0 51 64.7
Peaxi162Scf00254g00028 Petunia axillaris HOM05D006882 ORTHO05D008688 1.8e-09 66.6 56 60.7
Peaxi162Scf00025g00208 Petunia axillaris HOM05D006882 ORTHO05D008688 2.5e-08 62.8 56 58.9
Peaxi162Scf00329g00037 Petunia axillaris HOM05D006882 ORTHO05D008688 2.5e-08 62.8 61 55.7
CsaV3_5G014380 Cucumis sativus L. HOM05D006882 ORTHO05D008688 2.8e-07 59.3 75 46.7
CDE04G1794 Ceratophyllum demersum HOM05D006882 ORTHO05D008688 8.1e-07 57.8 72 45.8
Mapoly0103s0008 Marchantia polymorpha HOM05D022139 ORTHO05D008688 3.1e-06 55.8 74 44.6
Lsat_1_v5_gn_4_172620 Lactuca sativa HOM05D006882 ORTHO05D048217 6.9e-06 54.7 44 61.4


User provided reference genes

Program Settings