Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0995 Trochodendron aralioides HOM05D007835 ORTHO05D008482 1.6e-49 199.1 101 100.0
TAR629G3113 Trochodendron aralioides HOM05D007835 ORTHO05D008482 3.4e-28 128.3 105 67.6
TAR374G0487 Trochodendron aralioides HOM05D007835 ORTHO05D008482 2.0e-23 112.5 102 60.8
GSVIVG01033066001 Vitis vinifera HOM05D007835 ORTHO05D008482 1.2e-20 103.2 107 58.9
CiPaw.03G057300 Carya illinoinensis HOM05D007835 ORTHO05D008482 2.5e-18 95.5 112 58.0
Actinidia05895 Actinidia chinensis HOM05D007835 ORTHO05D008482 1.2e-17 93.2 114 52.6
Aqoxy5G03319 Aquilegia oxysepala HOM05D007835 ORTHO05D008482 1.8e-16 89.4 112 48.2
QL02p071044 Quercus lobata HOM05D007835 ORTHO05D008482 8.8e-16 87.0 111 55.0
Dinv33326 Davidia involucrata HOM05D007835 ORTHO05D008482 2.0e-15 85.9 110 50.0
Actinidia36209 Actinidia chinensis HOM05D007835 ORTHO05D008482 4.4e-15 84.7 109 50.5
Thecc.04G039400 Theobroma cacao HOM05D007835 ORTHO05D008482 4.4e-15 84.7 108 53.7
Potri.001G328300 Populus trichocarpa HOM05D007835 ORTHO05D008482 5.7e-15 84.3 111 49.5
Potri.017G065916 Populus trichocarpa HOM05D007835 ORTHO05D008482 5.7e-15 84.3 112 47.3
Duzib147G1374 Durio zibethinus HOM05D007835 ORTHO05D008482 7.4e-15 84.0 110 51.8
CiPaw.04G038800 Carya illinoinensis HOM05D007835 ORTHO05D008482 4.8e-14 81.3 117 50.4
Gohir.A05G337200 Gossypium hirsutum HOM05D007835 ORTHO05D008482 6.3e-14 80.9 109 50.5
MBI11_g22690_MAGBIO Magnolia biondii HOM05D007835 ORTHO05D008482 6.3e-14 80.9 105 46.7
Sabra17G0058300 Salix brachista HOM05D007835 ORTHO05D008482 6.3e-14 80.9 114 48.2
PGR142G0702 Punica granatum HOM05D007835 ORTHO05D008482 8.2e-14 80.5 106 50.0
COL.COLO4_13280 Corchorus olitorius HOM05D007835 ORTHO05D008482 1.4e-13 79.7 111 53.2
Gohir.D07G237000 Gossypium hirsutum HOM05D007835 ORTHO05D008482 1.4e-13 79.7 110 49.1
Gorai.001G272900 Gossypium raimondii HOM05D007835 ORTHO05D008482 1.4e-13 79.7 110 49.1
Gorai.012G085600 Gossypium raimondii HOM05D007835 ORTHO05D008482 1.4e-13 79.7 109 50.5
Gohir.A07G229800 Gossypium hirsutum HOM05D007835 ORTHO05D008482 1.8e-13 79.3 110 49.1
Gohir.D04G075900 Gossypium hirsutum HOM05D007835 ORTHO05D008482 4.1e-13 78.2 109 49.5
Sabra16G0210200 Salix brachista HOM05D007835 ORTHO05D008482 1.2e-12 76.6 110 42.7
Manes.17G102100 Manihot esculenta HOM05D007835 ORTHO05D008482 2.0e-12 75.9 115 50.4
Prupe.3G308000 Prunus persica HOM05D007835 ORTHO05D008482 2.0e-12 75.9 118 48.3
ATR0561G259 Amborella trichopoda HOM05D007835 ORTHO05D008482 7.7e-12 73.9 112 45.5
Atru.chr6.2588 Acer truncatum HOM05D007835 ORTHO05D008482 1.0e-11 73.6 121 50.4
Nn3g16421 Nelumbo nucifera HOM05D007835 ORTHO05D008482 1.7e-11 72.8 113 43.4
QL08p045526 Quercus lobata HOM05D007835 ORTHO05D008482 2.2e-11 72.4 107 48.6
Ciclev10017736m.g Citrus clementina HOM05D007835 ORTHO05D008482 6.5e-11 70.9 117 44.4
Cfa007213 Carpinus fangiana HOM05D007835 ORTHO05D008482 8.5e-11 70.5 107 47.7
Gohir.D09G038100 Gossypium hirsutum HOM05D007835 ORTHO05D008482 8.5e-11 70.5 112 49.1
HPP92_003565 Vanilla planifolia HOM05D007835 ORTHO05D008482 8.5e-11 70.5 110 41.8
Gohir.1Z049371 Gossypium hirsutum HOM05D007835 ORTHO05D008482 1.1e-10 70.1 112 49.1
Gohir.A09G036865 Gossypium hirsutum HOM05D007835 ORTHO05D008482 1.1e-10 70.1 112 49.1
Gohir.A09G036900 Gossypium hirsutum HOM05D007835 ORTHO05D008482 1.1e-10 70.1 112 49.1
Gorai.006G043500 Gossypium raimondii HOM05D007835 ORTHO05D008482 1.5e-10 69.7 112 49.1
TAR622G1408 Trochodendron aralioides HOM05D007835 ORTHO05D008482 1.5e-10 69.7 100 46.0
Sabra01G0042000 Salix brachista HOM05D019467 ORTHO05D008482 9.4e-10 67.0 97 48.5
TWI60G0136 Tripterygium wilfordii HOM05D007835 ORTHO05D008482 9.4e-10 67.0 113 48.7
Potri.003G169500 Populus trichocarpa HOM05D019467 ORTHO05D008482 1.6e-09 66.2 99 47.5
Eucgr.I01634 Eucalyptus grandis HOM05D007835 ORTHO05D008482 2.1e-09 65.9 112 43.8
MBI07_g11278_MAGBIO Magnolia biondii HOM05D007835 ORTHO05D008482 4.7e-09 64.7 101 45.5
Lalb_Chr00c01g0403701 Lupinus albus HOM05D007835 ORTHO05D008482 6.1e-09 64.3 103 46.6
TWI34G1201 Tripterygium wilfordii HOM05D007835 ORTHO05D008482 8.0e-09 63.9 112 48.2
CANSAT64G0845 Cannabis sativa HOM05D007835 ORTHO05D008482 1.0e-08 63.5 133 36.8
AUR62029415 Chenopodium quinoa HOM05D007835 ORTHO05D008482 1.4e-08 63.2 105 41.0
MSTRG.3071 Avicennia marina HOM05D007835 ORTHO05D008482 2.3e-08 62.4 124 39.5
Aqoxy3G01587 Aquilegia oxysepala HOM05D007835 ORTHO05D008482 4.0e-08 61.6 75 49.3
Sabra03G0124200 Salix brachista HOM05D019467 ORTHO05D008482 4.0e-08 61.6 99 45.5
DCAR_021801 Daucus carota HOM05D007835 ORTHO05D008482 6.7e-08 60.8 125 42.4
Dinv17581 Davidia involucrata HOM05D017642 ORTHO05D019451 6.7e-08 60.8 104 48.1
Actinidia30632 Actinidia chinensis HOM05D017642 ORTHO05D019451 8.8e-08 60.5 99 43.4
Ah.02g119850 Amaranthus hybridus HOM05D007835 ORTHO05D008482 8.8e-08 60.5 111 40.5
AUR62003426 Chenopodium quinoa HOM05D007835 ORTHO05D008482 1.1e-07 60.1 110 40.0
Cfa009380 Carpinus fangiana HOM05D007835 ORTHO05D043682 4.4e-07 58.2 112 38.4
Haze_14890 Corylus avellana HOM05D007835 ORTHO05D008482 4.4e-07 58.2 90 50.0
QL03p051946 Quercus lobata HOM05D023380 ORTHO05D008482 1.3e-06 56.6 114 39.5
RcHm_v2.0_Chr2g0175871 Rosa chinensis HOM05D007835 ORTHO05D008482 1.3e-06 56.6 136 38.2
Sabra06G0213600 Salix brachista HOM05D007835 ORTHO05D008482 1.3e-06 56.6 70 54.3
AUR62003466 Chenopodium quinoa HOM05D007835 ORTHO05D008482 2.2e-06 55.8 98 39.8
AUR62017774 Chenopodium quinoa HOM05D007835 ORTHO05D008482 2.2e-06 55.8 98 39.8
Nitab4.5_0002050g0020 Nicotiana tabacum HOM05D011578 ORTHO05D008482 3.7e-06 55.1 155 35.5
Rhsim10G0005300 Rhododendron simsii HOM05D007835 ORTHO05D008482 4.8e-06 54.7 128 39.1
Solyc02g094230.1 Solanum lycopersicum HOM05D011578 ORTHO05D008482 4.8e-06 54.7 133 36.8
CiPaw.05G107600 Carya illinoinensis HOM05D007835 ORTHO05D043682 8.2e-06 53.9 102 39.2


User provided reference genes

Program Settings