Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0982 Trochodendron aralioides HOM05D009292 ORTHO05D011231 1.6e-23 112.1 63 100.0
Hma1.2p1_0605F.1_g187940 Hydrangea macrophylla HOM05D009292 ORTHO05D011231 7.9e-15 83.2 63 74.6
Hma1.2p1_1676F.1_g297030 Hydrangea macrophylla HOM05D009292 ORTHO05D011231 6.7e-14 80.1 63 71.4
Ciclev10033278m.g Citrus clementina HOM05D009292 ORTHO05D011231 8.2e-12 73.2 62 71.0
MBI10_g18306_MAGBIO Magnolia biondii HOM05D009292 ORTHO05D011231 2.4e-11 71.6 68 69.1
Prupe.1G302100 Prunus persica HOM05D009292 ORTHO05D011231 2.4e-11 71.6 65 67.7
FvH4_4g28390 Fragaria vesca HOM05D009292 ORTHO05D011231 2.0e-10 68.6 64 67.2
FAN12G2553 Fragaria x ananassa HOM05D009292 ORTHO05D011231 2.0e-10 68.6 64 67.2
FAN22G1533 Fragaria x ananassa HOM05D009292 ORTHO05D011231 2.6e-10 68.2 64 67.2
Thecc.02G363900 Theobroma cacao HOM05D033799 ORTHO05D034832 1.0e-09 66.2 63 66.7
FAN07G1204 Fragaria x ananassa HOM05D009292 ORTHO05D011231 6.5e-09 63.5 64 64.1
RcHm_v2.0_Chr4g0436321 Rosa chinensis HOM05D009292 ORTHO05D011231 8.5e-09 63.2 66 65.2
Haze_11797 Corylus avellana HOM05D009292 ORTHO05D011231 1.1e-08 62.8 64 60.9
Sabra10G0100700 Salix brachista HOM05D009292 ORTHO05D011231 1.4e-08 62.4 52 67.3
Thecc.02G364000 Theobroma cacao HOM05D009292 ORTHO05D011231 3.2e-08 61.2 63 60.3
Cpa.g.sc1.240 Carica papaya HOM05D009292 ORTHO05D011231 7.2e-08 60.1 64 62.5
TAR374G0216 Trochodendron aralioides HOM05D000508 ORTHO05D000371 7.2e-08 60.1 52 67.3
Potri.010G132000 Populus trichocarpa HOM05D034230 ORTHO05D011231 3.6e-07 57.8 63 65.1
MD13G1049500 Malus domestica HOM05D027525 ORTHO05D017954 7.9e-07 56.6 65 63.1
CSS0021837 Camellia sinensis var. sinensis HOM05D009292 ORTHO05D011231 1.4e-06 55.8 66 59.1
Glyma.02G130500 Glycine max HOM05D051263 ORTHO05D020457 5.1e-06 53.9 57 59.6
Manes.14G095600 Manihot esculenta HOM05D009292 ORTHO05D011231 5.1e-06 53.9 64 59.4
GSVIVG01011982001 Vitis vinifera HOM05D027525 ORTHO05D441075 5.1e-06 53.9 61 60.7
CSS0023559 Camellia sinensis var. sinensis HOM05D009292 ORTHO05D011231 6.7e-06 53.5 65 58.5
Potri.010G132101 Populus trichocarpa HOM05D009292 ORTHO05D011231 6.7e-06 53.5 57 57.9


User provided reference genes

Program Settings