Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0975 Trochodendron aralioides HOM05D007565 ORTHO05D009551 3.7e-88 328.2 164 100.0
Dinv33829 Davidia involucrata HOM05D007565 ORTHO05D009551 1.5e-57 226.5 158 69.6
Nn4g23433 Nelumbo nucifera HOM05D007565 ORTHO05D009551 3.6e-51 205.3 164 64.0
GSVIVG01032907001 Vitis vinifera HOM05D007565 ORTHO05D009551 4.7e-51 204.9 157 66.2
MBI16_g10827_MAGBIO Magnolia biondii HOM05D007565 ORTHO05D009551 4.4e-49 198.4 154 66.2
Cfa007669 Carpinus fangiana HOM05D007565 ORTHO05D009551 1.1e-47 193.7 164 60.4
Rhsim08G0074900 Rhododendron simsii HOM05D007565 ORTHO05D009551 3.1e-47 192.2 154 59.7
Haze_14429 Corylus avellana HOM05D007565 ORTHO05D009551 2.0e-46 189.5 164 59.8
CANSAT64G0913 Cannabis sativa HOM05D007565 ORTHO05D009551 6.6e-45 184.5 151 60.9
Prupe.3G254800 Prunus persica HOM05D007565 ORTHO05D009551 1.9e-44 183.0 167 56.3
Gohir.A09G009400 Gossypium hirsutum HOM05D007565 ORTHO05D009551 9.5e-44 180.6 150 62.7
RcHm_v2.0_Chr2g0165831 Rosa chinensis HOM05D007565 ORTHO05D009551 1.6e-43 179.9 164 53.0
FvH4_6g46840 Fragaria vesca HOM05D007565 ORTHO05D009551 2.1e-43 179.5 164 53.0
CiPaw.04G055600 Carya illinoinensis HOM05D007565 ORTHO05D009551 3.6e-43 178.7 165 57.6
PSO478G3761 Papaver somniferum HOM05D007565 ORTHO05D009551 3.6e-43 178.7 161 60.2
ECA238G4035 Erigeron canadensis HOM05D007565 ORTHO05D009551 6.1e-43 177.9 151 57.6
Aqoxy3G00508 Aquilegia oxysepala HOM05D007565 ORTHO05D009551 1.4e-42 176.8 165 57.6
Gohir.D09G008500 Gossypium hirsutum HOM05D007565 ORTHO05D009551 3.0e-42 175.6 150 62.0
Gorai.006G010200 Gossypium raimondii HOM05D007565 ORTHO05D009551 3.0e-42 175.6 150 62.0
Actinidia17585 Actinidia chinensis HOM05D007565 ORTHO05D009551 3.4e-41 172.2 150 56.7
TWI60G0367 Tripterygium wilfordii HOM05D007565 ORTHO05D009551 3.4e-41 172.2 154 53.9
ATR0177G044 Amborella trichopoda HOM05D007565 ORTHO05D009551 5.8e-41 171.4 139 64.7
MD09G1066900 Malus domestica HOM05D007565 ORTHO05D009551 5.8e-41 171.4 157 52.9
Atru.chr8.429 Acer truncatum HOM05D007565 ORTHO05D009551 7.5e-41 171.0 144 60.4
FAN05G3080 Fragaria x ananassa HOM05D007565 ORTHO05D009551 1.3e-40 170.2 152 55.3
CSS0012139 Camellia sinensis var. sinensis HOM05D007565 ORTHO05D009551 4.9e-40 168.3 165 52.1
Cc07_g04240 Coffea canephora HOM05D007565 ORTHO05D009551 8.3e-40 167.5 156 57.7
Sabra04G0069500 Salix brachista HOM05D007565 ORTHO05D009551 7.0e-39 164.5 164 51.8
Eucgr.I02035 Eucalyptus grandis HOM05D007565 ORTHO05D009551 1.6e-38 163.3 157 54.1
PGR004G0757 Punica granatum HOM05D007565 ORTHO05D009551 1.6e-38 163.3 157 54.1
Lalb_Chr02g0158911 Lupinus albus HOM05D007565 ORTHO05D009551 2.0e-38 162.9 152 55.9
vmacro18148 Vaccinium macrocarpon HOM05D007565 ORTHO05D009551 1.0e-37 160.6 164 53.7
Potri.004G120300 Populus trichocarpa HOM05D007565 ORTHO05D009551 2.3e-37 159.5 164 51.2
Nitab4.5_0002957g0030 Nicotiana tabacum HOM05D000753 ORTHO05D003622 5.0e-37 158.3 149 55.7
Lj2g0002665 Lotus japonicus HOM05D007565 ORTHO05D009551 1.5e-36 156.8 152 55.3
Glyma.19G030200 Glycine max HOM05D007565 ORTHO05D009551 1.9e-36 156.4 153 56.2
DCAR_025432 Daucus carota HOM05D007565 ORTHO05D009551 2.5e-36 156.0 127 62.2
Lsat_1_v5_gn_2_90121 Lactuca sativa HOM05D007565 ORTHO05D009551 3.3e-36 155.6 156 54.5
Peaxi162Scf00991g00215 Petunia axillaris HOM05D007565 ORTHO05D009551 3.3e-36 155.6 94 77.7
TPR.G10009 Trifolium pratense HOM05D007565 ORTHO05D009551 4.3e-36 155.2 145 55.9
arahy.Tifrunner.gnm1.ann1.GE184H Arachis hypogaea HOM05D007565 ORTHO05D009551 5.6e-36 154.8 153 51.6
Psat1g068880 Pisum sativum HOM05D007565 ORTHO05D009551 9.5e-36 154.1 146 56.8
AT5G39210 Arabidopsis thaliana HOM05D007565 ORTHO05D009551 1.6e-35 153.3 154 51.9
arahy.Tifrunner.gnm1.ann1.X5N52Z Arachis hypogaea HOM05D007565 ORTHO05D009551 1.6e-35 153.3 153 50.3
Cpa.g.sc14.177 Carica papaya HOM05D007565 ORTHO05D009551 1.6e-35 153.3 164 50.6
HanXRQChr07g0199761 Helianthus annuus HOM05D007565 ORTHO05D009551 1.6e-35 153.3 154 51.3
Nitab4.5_0000212g0260 Nicotiana tabacum HOM05D000753 ORTHO05D003622 1.6e-35 153.3 109 68.8
THA.LOC104822868 Tarenaya hassleriana HOM05D007565 ORTHO05D009551 3.6e-35 152.1 160 49.4
Thhalv10027973m.g Eutrema salsugineum HOM05D007565 ORTHO05D009551 4.7e-35 151.8 161 50.3
Manes.01G096100 Manihot esculenta HOM05D007565 ORTHO05D009551 8.0e-35 151.0 167 52.1
CARHR263200 Cardamine hirsuta HOM05D007565 ORTHO05D009551 1.1e-34 150.6 155 50.3
CDE10G0935 Ceratophyllum demersum HOM05D007565 ORTHO05D009551 1.4e-34 150.2 93 76.3
BolC4t26571H Brassica oleracea HOM05D007565 ORTHO05D009551 6.8e-34 147.9 161 48.4
AUR62018189 Chenopodium quinoa HOM05D007565 ORTHO05D009551 8.9e-34 147.5 151 53.6
SalBow1G1387 Salvia bowleyana HOM05D007565 ORTHO05D009551 8.9e-34 147.5 87 78.2
SalBow1G4541 Salvia bowleyana HOM05D007565 ORTHO05D009551 8.9e-34 147.5 87 78.2
FAN02G0614 Fragaria x ananassa HOM05D007565 ORTHO05D009551 1.2e-33 147.1 93 69.9
FAN09G3824 Fragaria x ananassa HOM05D007565 ORTHO05D009551 1.2e-33 147.1 93 69.9
FAN14G1390 Fragaria x ananassa HOM05D007565 ORTHO05D009551 1.5e-33 146.7 93 69.9
Sp7g02770 Schrenkiella parvula HOM05D007565 ORTHO05D009551 1.5e-33 146.7 161 50.3
Aa31LG9G16710 Aethionema arabicum HOM05D007565 ORTHO05D009551 2.6e-33 146.0 154 50.0
BcaB06g27735 Brassica carinata HOM05D007565 ORTHO05D009551 4.4e-33 145.2 159 49.7
Migut.H00623 Erythranthe guttata HOM05D007565 ORTHO05D009551 4.4e-33 145.2 136 53.7
CAN.G398.21 Capsicum annuum HOM05D007565 ORTHO05D009551 5.8e-33 144.8 94 71.3
MSTRG.2997 Avicennia marina HOM05D007565 ORTHO05D009551 7.5e-33 144.4 95 72.6
AUR62038674 Chenopodium quinoa HOM05D007565 ORTHO05D009551 7.5e-33 144.4 138 55.8
PGSC0003DMG400025155 Solanum tuberosum HOM05D007565 ORTHO05D009551 7.5e-33 144.4 94 69.1
BcaC02g08856 Brassica carinata HOM05D007565 ORTHO05D009551 1.3e-32 143.7 156 48.7
C04p49800 Brassica napus HOM05D007565 ORTHO05D009551 1.3e-32 143.7 156 48.7
EL10Ac2g02475 Beta vulgaris HOM05D007565 ORTHO05D009551 2.9e-32 142.5 93 75.3
A04p15530 Brassica napus HOM05D007565 ORTHO05D009551 2.9e-32 142.5 156 48.7
BraA04t17189Z Brassica rapa HOM05D007565 ORTHO05D009551 2.9e-32 142.5 156 48.7
Ciclev10012981m.g Citrus clementina HOM05D007565 ORTHO05D009551 2.9e-32 142.5 156 51.3
Os01g0763700 Oryza sativa ssp. japonica HOM05D007565 ORTHO05D009551 2.9e-32 142.5 84 76.2
Phvul.004G037200 Phaseolus vulgaris HOM05D007565 ORTHO05D009551 2.9e-32 142.5 153 49.7
Solyc02g066920.3 Solanum lycopersicum HOM05D007565 ORTHO05D009551 3.7e-32 142.1 95 67.4
AL7G51250 Arabidopsis lyrata HOM05D007565 ORTHO05D009551 4.9e-32 141.7 157 49.7
VMungo0464G0770 Vigna mungo HOM05D007565 ORTHO05D009551 6.4e-32 141.4 158 48.1
Sopen02g016110 Solanum pennellii HOM05D007565 ORTHO05D009551 8.3e-32 141.0 95 66.3
Carub.0007s3671 Capsella rubella HOM05D007565 ORTHO05D009551 5.4e-31 138.3 155 47.7
unitig_736.g22275 Utricularia gibba HOM05D007565 ORTHO05D009551 7.0e-31 137.9 93 69.9
QL02p067580 Quercus lobata HOM05D007565 ORTHO05D009551 1.6e-30 136.7 90 74.4
EL10Ac2g03143 Beta vulgaris HOM05D007565 ORTHO05D009551 7.8e-30 134.4 81 77.8
ClCG07G016310 Citrullus lanatus HOM05D007565 ORTHO05D009551 2.3e-29 132.9 100 63.0
Lju41C3T7 Lonicera japonica HOM05D007565 ORTHO05D009551 1.1e-28 130.6 88 71.6
COL.COLO4_04935 Corchorus olitorius HOM05D007565 ORTHO05D009551 2.5e-28 129.4 103 60.2
CsaV3_4G009160 Cucumis sativus L. HOM05D007565 ORTHO05D009551 3.3e-28 129.0 110 55.5
Sed0016543 Sechium edule HOM05D007565 ORTHO05D009551 6.2e-27 124.8 96 61.5
MELO3C024877.2 Cucumis melo HOM05D007565 ORTHO05D009551 1.2e-25 120.6 174 42.5
Mapoly0001s0042 Marchantia polymorpha HOM05D007565 ORTHO05D009551 2.9e-24 115.9 97 55.7
BcaC02g08855 Brassica carinata HOM05D007565 ORTHO05D009551 3.2e-23 112.5 156 42.3
BcaC02g08857 Brassica carinata HOM05D007565 ORTHO05D009551 3.2e-23 112.5 156 42.3
SMO133G0016 Selaginella moellendorffii HOM05D007565 ORTHO05D009551 3.2e-23 112.5 81 60.5
Pp3c15_1410 Physcomitrium patens HOM05D007565 ORTHO05D009551 4.1e-23 112.1 86 58.1
CDE10G1057 Ceratophyllum demersum HOM05D000058 ORTHO05D000077 5.4e-23 111.7 72 75.0
Medtr6g015250 Medicago truncatula HOM05D007565 ORTHO05D009551 1.5e-20 103.6 109 47.7
SEGI_38587 Sequoiadendron giganteum HOM05D007565 ORTHO05D009551 4.3e-20 102.1 89 52.8
Medtr6g015275 Medicago truncatula HOM05D007565 ORTHO05D009551 5.6e-20 101.7 107 47.7
AagrBONN_evm.TU.Sc2ySwM_362.2072 Anthoceros agrestis HOM05D007565 ORTHO05D009551 9.5e-20 100.9 78 59.0
MBI19_g17444_MAGBIO Magnolia biondii HOM05D000545 ORTHO05D000539 1.1e-18 97.4 61 77.0
TPR.G36332 Trifolium pratense HOM05D007565 ORTHO05D009551 3.8e-08 62.4 48 58.3


User provided reference genes

Program Settings