Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0942 Trochodendron aralioides HOM05D006411 ORTHO05D007563 2.1e-140 502.3 238 100.0
GSVIVG01004943001 Vitis vinifera HOM05D006411 ORTHO05D007563 3.9e-99 365.2 235 74.0
TWI18G1006 Tripterygium wilfordii HOM05D006411 ORTHO05D007563 4.4e-98 361.7 236 73.3
Duzib132G0393 Durio zibethinus HOM05D006411 ORTHO05D007563 5.7e-98 361.3 235 73.2
Dinv09212 Davidia involucrata HOM05D006411 ORTHO05D007563 4.8e-97 358.2 233 75.1
Prupe.1G216800 Prunus persica HOM05D006411 ORTHO05D007563 4.1e-96 355.1 239 70.7
Haze_12492 Corylus avellana HOM05D006411 ORTHO05D007563 4.5e-95 351.7 238 72.7
FvH4_4g22791 Fragaria vesca HOM05D006411 ORTHO05D007563 3.2e-93 345.5 236 69.1
CSS0035608 Camellia sinensis var. sinensis HOM05D006411 ORTHO05D007563 4.2e-93 345.1 238 72.3
RcHm_v2.0_Chr4g0429021 Rosa chinensis HOM05D006411 ORTHO05D007563 5.5e-93 344.7 235 69.8
MD13G1129600 Malus domestica HOM05D006411 ORTHO05D007563 7.2e-93 344.4 238 70.2
MD16G1129800 Malus domestica HOM05D006411 ORTHO05D007563 9.4e-93 344.0 238 68.9
Cfa009441 Carpinus fangiana HOM05D006411 ORTHO05D007563 1.2e-92 343.6 236 71.6
QL03p049668 Quercus lobata HOM05D006411 ORTHO05D007563 2.1e-92 342.8 244 69.3
FAN17G2521 Fragaria x ananassa HOM05D006411 ORTHO05D007563 4.7e-92 341.7 236 68.2
FAN12G0338 Fragaria x ananassa HOM05D002780 ORTHO05D003254 3.0e-91 339.0 235 68.1
Actinidia09598 Actinidia chinensis HOM05D006411 ORTHO05D007563 3.9e-91 338.6 233 69.1
Atru.chr12.1401 Acer truncatum HOM05D006411 ORTHO05D007563 4.4e-90 335.1 236 71.2
Manes.09G187200 Manihot esculenta HOM05D006411 ORTHO05D007563 8.2e-89 330.9 237 67.1
Thecc.02G193900 Theobroma cacao HOM05D006411 ORTHO05D007563 1.1e-88 330.5 205 77.6
RhsimUnG0101400 Rhododendron simsii HOM05D006411 ORTHO05D007563 1.8e-88 329.7 207 75.4
Sabra03G0118900 Salix brachista HOM05D006411 ORTHO05D007563 9.1e-88 327.4 243 64.2
Nn1g07843 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.5e-87 325.5 248 69.0
Gohir.A01G141100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 5.9e-87 324.7 239 67.4
Oeu044509.2 Olea europaea HOM05D006411 ORTHO05D007563 1.0e-86 323.9 236 67.4
Gorai.002G163700 Gossypium raimondii HOM05D006411 ORTHO05D007563 1.7e-86 323.2 239 66.5
CsaV3_6G007790 Cucumis sativus L. HOM05D006411 ORTHO05D007563 1.9e-85 319.7 235 64.3
Aqoxy5G03164 Aquilegia oxysepala HOM05D006411 ORTHO05D007563 1.6e-84 316.6 214 71.0
Lsat_1_v5_gn_2_17720 Lactuca sativa HOM05D006411 ORTHO05D007563 1.8e-83 313.2 233 63.5
Sed0009782 Sechium edule HOM05D006411 ORTHO05D007563 8.8e-83 310.8 235 64.3
Nn3g20757 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.2e-82 310.5 223 69.1
MSTRG.461 Avicennia marina HOM05D006411 ORTHO05D007563 2.0e-82 309.7 234 62.4
Ciclev10005785m.g Citrus clementina HOM05D006411 ORTHO05D007563 2.6e-82 309.3 236 64.4
Solyc12g016210.2 Solanum lycopersicum HOM05D006411 ORTHO05D007563 8.2e-81 304.3 234 63.2
Sopen12g008000 Solanum pennellii HOM05D006411 ORTHO05D007563 1.1e-80 303.9 234 63.2
SalBow2G2156 Salvia bowleyana HOM05D006411 ORTHO05D007563 4.1e-80 302.0 235 60.0
CANSAT01G2250 Cannabis sativa HOM05D006411 ORTHO05D007563 4.5e-79 298.5 246 62.6
SalBow7G1895 Salvia bowleyana HOM05D006411 ORTHO05D007563 7.7e-79 297.7 237 59.5
Ah.03g135590 Amaranthus hybridus HOM05D006411 ORTHO05D007563 1.0e-78 297.4 239 61.1
Migut.K01066 Erythranthe guttata HOM05D006411 ORTHO05D007563 1.0e-78 297.4 235 61.7
Cc11_g15120 Coffea canephora HOM05D006411 ORTHO05D007563 2.5e-77 292.7 251 59.8
HanXRQChr17g0559141 Helianthus annuus HOM05D006411 ORTHO05D007563 3.2e-77 292.4 236 60.2
PSO349G0017 Papaver somniferum HOM05D006411 ORTHO05D007563 3.2e-77 292.4 282 55.7
CAN.G529.4 Capsicum annuum HOM05D006411 ORTHO05D007563 4.2e-77 292.0 236 61.4
Lj3g0004314 Lotus japonicus HOM05D006411 ORTHO05D007563 5.5e-77 291.6 245 59.6
EL10Ac6g13598 Beta vulgaris HOM05D006411 ORTHO05D007563 3.6e-76 288.9 246 58.9
AUR62031618 Chenopodium quinoa HOM05D006411 ORTHO05D007563 6.1e-76 288.1 249 59.4
Nitab4.5_0003020g0130 Nicotiana tabacum HOM05D006411 ORTHO05D007563 8.0e-76 287.7 239 60.7
PSO765G0094 Papaver somniferum HOM05D006411 ORTHO05D007563 8.0e-76 287.7 282 56.0
Nitab4.5_0002671g0040 Nicotiana tabacum HOM05D006411 ORTHO05D007563 1.0e-75 287.3 241 61.4
SGA_v2.0_scaffold80G25942 Striga asiatica HOM05D006411 ORTHO05D007563 1.0e-75 287.3 237 57.0
Sc11g0000150 Simmondsia chinensis HOM05D006411 ORTHO05D007563 1.8e-75 286.6 197 69.5
TPR.G28023 Trifolium pratense HOM05D006411 ORTHO05D007563 4.0e-75 285.4 233 60.9
VMungo1127G0609 Vigna mungo HOM05D006411 ORTHO05D007563 1.5e-74 283.5 241 57.7
Actinidia34001 Actinidia chinensis HOM05D006411 ORTHO05D007563 2.6e-74 282.7 181 73.5
THA.LOC104808624 Tarenaya hassleriana HOM05D006411 ORTHO05D007563 4.4e-74 282.0 237 58.2
Zm00001eb222220 Zea mays HOM05D006411 ORTHO05D007563 5.7e-74 281.6 233 62.2
Glyma.11G109300 Glycine max HOM05D006411 ORTHO05D007563 2.8e-73 279.3 223 61.0
AL3G37910 Arabidopsis lyrata HOM05D006411 ORTHO05D007563 6.3e-73 278.1 236 62.3
SHI04127 Sapria himalayana HOM05D006411 ORTHO05D007563 8.3e-73 277.7 238 58.0
Aa31LG8G9800 Aethionema arabicum HOM05D006411 ORTHO05D007563 1.4e-72 276.9 237 59.1
AT3G23255 Arabidopsis thaliana HOM05D006411 ORTHO05D007563 3.1e-72 275.8 238 60.9
Sp3g20930 Schrenkiella parvula HOM05D006411 ORTHO05D007563 5.4e-72 275.0 235 59.6
Thhalv10021467m.g Eutrema salsugineum HOM05D006411 ORTHO05D007563 9.1e-72 274.2 234 59.0
Gohir.D01G132100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 1.2e-71 273.9 183 69.9
ATR0751G011 Amborella trichopoda HOM05D006411 ORTHO05D006707 3.5e-71 272.3 187 69.5
CiPaw.05G102200 Carya illinoinensis HOM05D006411 ORTHO05D007563 4.5e-71 271.9 238 60.9
Psat7g169880 Pisum sativum HOM05D006411 ORTHO05D007563 5.9e-71 271.6 230 59.6
Os10g0466100 Oryza sativa ssp. japonica HOM05D006411 ORTHO05D007563 7.7e-71 271.2 236 59.7
PGR119G0335 Punica granatum HOM05D006411 ORTHO05D007563 7.7e-71 271.2 235 59.1
BcaB06g26470 Brassica carinata HOM05D006411 ORTHO05D007563 1.3e-70 270.4 236 59.3
ECA238G0094 Erigeron canadensis HOM05D006411 ORTHO05D007563 5.0e-70 268.5 209 63.6
Hund06130 Selenicereus undatus HOM05D006411 ORTHO05D007563 5.0e-70 268.5 266 55.6
Carub.0003s2350 Capsella rubella HOM05D006411 ORTHO05D007563 6.6e-70 268.1 239 59.4
C07p14190 Brassica napus HOM05D006411 ORTHO05D007563 8.6e-70 267.7 236 58.9
BolC7t41915H Brassica oleracea HOM05D006411 ORTHO05D007563 2.5e-69 266.2 235 59.1
Ca_18949_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 6.1e-68 261.5 210 60.0
Ca_29765_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 6.1e-68 261.5 210 60.0
A07p09200 Brassica napus HOM05D006411 ORTHO05D007563 6.8e-67 258.1 237 58.2
BraA07t28715Z Brassica rapa HOM05D006411 ORTHO05D007563 8.9e-67 257.7 236 58.5
vmacro10313 Vaccinium macrocarpon HOM05D006411 ORTHO05D007563 5.7e-66 255.0 172 71.5
HPP92_007040 Vanilla planifolia HOM05D006411 ORTHO05D007563 2.8e-65 252.7 238 55.0
SEGI_29411 Sequoiadendron giganteum HOM05D006411 ORTHO05D007563 5.4e-64 248.4 247 51.0
CARHR099210 Cardamine hirsuta HOM05D006411 ORTHO05D007563 1.5e-61 240.4 206 60.7
Phvul.011G018400 Phaseolus vulgaris HOM05D006411 ORTHO05D007563 4.0e-59 232.3 185 61.1
MELO3C022353.2 Cucumis melo HOM05D006411 ORTHO05D007563 1.2e-58 230.7 198 59.1
Nn2g15361 Nelumbo nucifera HOM05D006411 ORTHO05D007563 2.0e-58 229.9 173 66.5
ClCG06G001760 Citrullus lanatus HOM05D006411 ORTHO05D007563 2.6e-58 229.6 180 61.7
Nn3g17917 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.1e-56 224.2 161 67.7
arahy.Tifrunner.gnm1.ann1.ZM7ZD1 Arachis hypogaea HOM05D006411 ORTHO05D007563 4.1e-56 222.2 223 51.1
Potri.003G163500 Populus trichocarpa HOM05D006411 ORTHO05D007563 1.6e-55 220.3 150 67.3
Lalb_Chr19g0140051 Lupinus albus HOM05D006411 ORTHO05D007563 3.5e-55 219.2 248 50.0
COL.COLO4_21790 Corchorus olitorius HOM05D006411 ORTHO05D007563 3.9e-54 215.7 234 53.0
Lj5A251G70 Lonicera japonica HOM05D006411 ORTHO05D007563 3.9e-54 215.7 239 50.6
Carub.0137s0001 Capsella rubella HOM05D006411 ORTHO05D007563 1.1e-53 214.2 173 63.0
Medtr4g078190 Medicago truncatula HOM05D006411 ORTHO05D007563 1.8e-51 206.8 136 69.1
Pp3c2_21820 Physcomitrium patens HOM05D006411 ORTHO05D007563 1.8e-51 206.8 220 49.1
AUR62010749 Chenopodium quinoa HOM05D006411 ORTHO05D007563 1.6e-47 193.7 150 63.3
AUR62020519 Chenopodium quinoa HOM05D006411 ORTHO05D007563 9.5e-45 184.5 141 64.5
AagrBONN_evm.TU.Sc2ySwM_344.2329 Anthoceros agrestis HOM05D014047 ORTHO05D007563 1.2e-42 177.6 171 53.2
CBR_g41204 Chara braunii HOM05D006411 ORTHO05D007563 1.9e-40 170.2 221 42.5
Lj5g0007299 Lotus japonicus HOM05D006411 ORTHO05D007563 6.0e-39 165.2 159 54.1
Mapoly0164s0017 Marchantia polymorpha HOM05D006411 ORTHO05D007563 3.0e-38 162.9 208 43.8
FvH4_4g07260 Fragaria vesca HOM05D006411 ORTHO05D007563 4.7e-36 155.6 94 69.1
SHI32270 Sapria himalayana HOM05D006411 ORTHO05D007563 2.1e-28 130.2 128 52.3
Nn7g35834 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.1e-24 117.9 71 73.2
Dinv15386 Davidia involucrata HOM05D006411 ORTHO05D007563 3.2e-24 116.3 60 81.7
AUR62015683 Chenopodium quinoa HOM05D006411 ORTHO05D007563 2.1e-20 103.6 69 71.0
SMO119G0262 Selaginella moellendorffii HOM05D006411 ORTHO05D007563 1.5e-18 97.4 120 39.2
Nn2g15434 Nelumbo nucifera HOM05D006411 ORTHO05D007563 2.0e-18 97.1 181 40.3
Nn7g35833 Nelumbo nucifera HOM05D006411 ORTHO05D007563 2.2e-17 93.6 65 70.8
MCO06G175 Micromonas commoda HOM05D006411 ORTHO05D007563 3.0e-14 83.2 187 31.6
SGA_v2.0_scaffold360G49865 Striga asiatica HOM05D020805 ORTHO05D007563 1.3e-12 77.8 84 45.2
Glyma.12G016051 Glycine max HOM05D006411 ORTHO05D007563 2.8e-12 76.6 86 46.5
MBI02_g46060_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 4.0e-11 72.8 37 78.4
MBI05_g34743_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 5.3e-11 72.4 56 58.9
MBI04_g21533_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 2.0e-10 70.5 36 77.8
Peaxi162Scf00217g00911 Petunia axillaris HOM05D006411 ORTHO05D007563 2.0e-10 70.5 152 36.2
SalBow3G2205 Salvia bowleyana HOM05D006411 ORTHO05D007563 8.4e-09 65.1 97 39.2
CAN.G1161.15 Capsicum annuum HOM05D000064 ORTHO05D007563 1.6e-07 60.8 41 65.9
AagrBONN_evm.TU.Sc2ySwM_344.2366 Anthoceros agrestis HOM05D006411 ORTHO05D007563 2.3e-06 57.0 71 42.3


User provided reference genes

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