Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0835 Trochodendron aralioides HOM05D006437 ORTHO05D007973 3.1e-36 154.5 71 100.0
TAR371G0317 Trochodendron aralioides HOM05D006437 ORTHO05D007973 4.7e-24 114.0 51 98.0
Cfa007843 Carpinus fangiana HOM05D006437 ORTHO05D007973 2.3e-23 111.7 50 96.0
TAR371G1269 Trochodendron aralioides HOM05D006437 ORTHO05D007973 2.6e-22 108.2 52 90.4
TAR371G0259 Trochodendron aralioides HOM05D006437 ORTHO05D007973 3.4e-22 107.8 52 90.4
GSVIVG01030860001 Vitis vinifera HOM05D006437 ORTHO05D007973 3.4e-22 107.8 68 69.1
Aqoxy7G00638 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 1.3e-21 105.9 52 82.7
Haze_14223 Corylus avellana HOM05D006437 ORTHO05D007973 1.3e-21 105.9 50 88.0
CiPaw.03G068600 Carya illinoinensis HOM05D006437 ORTHO05D007973 1.7e-21 105.5 49 91.8
QL11p004106 Quercus lobata HOM05D006437 ORTHO05D007973 3.2e-20 101.3 65 67.7
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 5.4e-20 100.5 68 63.2
CSS0043713 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 7.0e-20 100.1 63 66.7
MD09G1261500 Malus domestica HOM05D006437 ORTHO05D007973 7.0e-20 100.1 49 89.8
ClCG05G010950 Citrullus lanatus HOM05D006437 ORTHO05D007973 9.2e-20 99.8 65 64.6
Lj6g0018768 Lotus japonicus HOM05D006437 ORTHO05D007973 9.2e-20 99.8 49 83.7
Os01g0644200 Oryza sativa ssp. japonica HOM05D006437 ORTHO05D007973 1.2e-19 99.4 49 85.7
TAR629G2663 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.2e-19 99.4 65 67.7
Hma1.2p1_0832F.1_g225650 Hydrangea macrophylla HOM05D006437 ORTHO05D007973 1.6e-19 99.0 49 87.8
SalBow7G1639 Salvia bowleyana HOM05D006437 ORTHO05D007973 1.6e-19 99.0 52 80.8
MELO3C020290.2 Cucumis melo HOM05D006437 ORTHO05D007973 2.1e-19 98.6 65 63.1
Migut.L00468 Erythranthe guttata HOM05D006437 ORTHO05D007973 2.1e-19 98.6 65 66.2
BcaC04g18789 Brassica carinata HOM05D006437 ORTHO05D007973 2.7e-19 98.2 52 76.9
CSS0019264 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 2.7e-19 98.2 52 76.9
Medtr3g067720 Medicago truncatula HOM05D006437 ORTHO05D007973 2.7e-19 98.2 49 85.7
Phvul.001G231901 Phaseolus vulgaris HOM05D006437 ORTHO05D007973 2.7e-19 98.2 49 85.7
Carub.0006s1569 Capsella rubella HOM05D006437 ORTHO05D007973 3.5e-19 97.8 52 76.9
Aa31LG5G13890 Aethionema arabicum HOM05D006437 ORTHO05D007973 4.6e-19 97.4 49 83.7
Ca_08164_v3 Cicer arietinum L. HOM05D006437 ORTHO05D007973 4.6e-19 97.4 49 83.7
CANSAT78G0649 Cannabis sativa HOM05D006437 ORTHO05D007973 6.0e-19 97.1 49 83.7
Thhalv10015148m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 6.0e-19 97.1 58 69.0
Lsat_1_v5_gn_2_81461 Lactuca sativa HOM05D006437 ORTHO05D007973 6.0e-19 97.1 50 82.0
Sed0002962 Sechium edule HOM05D006437 ORTHO05D007973 6.0e-19 97.1 65 64.6
AL6G28540 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 7.8e-19 96.7 52 75.0
Cc07_g08170 Coffea canephora HOM05D006437 ORTHO05D007973 7.8e-19 96.7 65 63.1
Zm00001eb158640 Zea mays HOM05D006437 ORTHO05D007973 7.8e-19 96.7 49 83.7
CARHR195740 Cardamine hirsuta HOM05D006437 ORTHO05D007973 1.0e-18 96.3 52 75.0
THA.LOC104820840 Tarenaya hassleriana HOM05D006437 ORTHO05D007973 1.0e-18 96.3 52 76.9
TPR.G15845 Trifolium pratense HOM05D006437 ORTHO05D007973 1.3e-18 95.9 52 80.8
ECA238G0319 Erigeron canadensis HOM05D006437 ORTHO05D007973 1.7e-18 95.5 50 78.0
Lalb_Chr10g0104491 Lupinus albus HOM05D006437 ORTHO05D007973 1.7e-18 95.5 65 66.2
Potri.017G128600 Populus trichocarpa HOM05D006437 ORTHO05D007973 1.7e-18 95.5 50 80.0
Aqoxy5G01129 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 2.3e-18 95.1 49 75.5
Ciclev10013249m.g Citrus clementina HOM05D006437 ORTHO05D007973 3.0e-18 94.7 49 79.6
Medtr3g067715 Medicago truncatula HOM05D006437 ORTHO05D007973 3.0e-18 94.7 49 83.7
Eucgr.F02822 Eucalyptus grandis HOM05D006437 ORTHO05D007973 3.9e-18 94.4 49 81.6
Glyma.11G218400 Glycine max HOM05D006437 ORTHO05D007973 3.9e-18 94.4 49 81.6
Glyma.18G038851 Glycine max HOM05D006437 ORTHO05D007973 3.9e-18 94.4 49 81.6
Dinv19010 Davidia involucrata HOM05D006437 ORTHO05D007973 5.1e-18 94.0 49 79.6
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 6.6e-18 93.6 47 85.1
FAN27G3274 Fragaria x ananassa HOM05D006437 ORTHO05D007973 6.6e-18 93.6 63 63.5
Nn3g18216 Nelumbo nucifera HOM05D006437 ORTHO05D007973 6.6e-18 93.6 49 81.6
Thecc.04G121100 Theobroma cacao HOM05D006437 ORTHO05D007973 6.6e-18 93.6 47 83.0
FAN15G1984 Fragaria x ananassa HOM05D006437 ORTHO05D007973 8.6e-18 93.2 47 83.0
HanXRQChr07g0193741 Helianthus annuus HOM05D006437 ORTHO05D007973 8.6e-18 93.2 49 81.6
AL3G12980 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 1.1e-17 92.8 49 83.7
AT3G03341 Arabidopsis thaliana HOM05D006437 ORTHO05D007973 1.1e-17 92.8 49 83.7
Carub.0003s0252 Capsella rubella HOM05D006437 ORTHO05D007973 1.1e-17 92.8 49 83.7
CARHR077390 Cardamine hirsuta HOM05D006437 ORTHO05D007973 1.1e-17 92.8 49 83.7
Thhalv10022211m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 1.1e-17 92.8 49 83.7
PGR042G3666 Punica granatum HOM05D006437 ORTHO05D007973 1.1e-17 92.8 48 81.2
Sp3g02370 Schrenkiella parvula HOM05D006437 ORTHO05D007973 1.1e-17 92.8 49 81.6
BcaC09g47741 Brassica carinata HOM05D006437 ORTHO05D007973 1.5e-17 92.4 49 81.6
Cpa.g.sc604.3 Carica papaya HOM05D006437 ORTHO05D007973 1.9e-17 92.0 52 75.0
AUR62023238 Chenopodium quinoa HOM05D006437 ORTHO05D007973 2.5e-17 91.7 49 77.6
BcaC09g47742 Brassica carinata HOM05D006437 ORTHO05D007973 3.3e-17 91.3 49 79.6
A06p26360 Brassica napus HOM05D006437 ORTHO05D007973 3.3e-17 91.3 49 79.6
BNapus_Darmor_BZH_scaffold_162p00120 Brassica napus HOM05D006437 ORTHO05D007973 3.3e-17 91.3 49 79.6
BNapus_Darmor_BZH_scaffold_78p00110 Brassica napus HOM05D006437 ORTHO05D007973 3.3e-17 91.3 49 79.6
BolC1t05835H Brassica oleracea HOM05D006437 ORTHO05D007973 3.3e-17 91.3 49 79.6
Nitab4.5_0004399g0060 Nicotiana tabacum HOM05D006437 ORTHO05D007973 3.3e-17 91.3 49 81.6
Nn4g24140 Nelumbo nucifera HOM05D006437 ORTHO05D007973 4.3e-17 90.9 49 79.6
Solyc02g091390.3 Solanum lycopersicum HOM05D006437 ORTHO05D007973 4.3e-17 90.9 49 81.6
Sopen02g036010 Solanum pennellii HOM05D006437 ORTHO05D007973 4.3e-17 90.9 49 81.6
PGSC0003DMG400030646 Solanum tuberosum HOM05D006437 ORTHO05D007973 4.3e-17 90.9 49 81.6
EL10Ac2g04484 Beta vulgaris HOM05D006437 ORTHO05D007973 5.6e-17 90.5 49 75.5
Peaxi162Scf00118g00018 Petunia axillaris HOM05D006437 ORTHO05D007973 7.3e-17 90.1 49 77.6
Pp3c19_5460 Physcomitrium patens HOM05D006437 ORTHO05D007973 7.3e-17 90.1 58 62.1
Pp3c19_5500 Physcomitrium patens HOM05D006437 ORTHO05D007973 7.3e-17 90.1 58 62.1
AUR62023191 Chenopodium quinoa HOM05D006437 ORTHO05D007973 9.5e-17 89.7 49 75.5
DCAR_015248 Daucus carota HOM05D006437 ORTHO05D007973 9.5e-17 89.7 47 80.9
RcHm_v2.0_Chr1g0370661 Rosa chinensis HOM05D006437 ORTHO05D007973 9.5e-17 89.7 47 83.0
Mapoly0046s0059 Marchantia polymorpha HOM05D006437 ORTHO05D007973 1.2e-16 89.4 49 63.3
PSO017G0604 Papaver somniferum HOM05D006437 ORTHO05D007973 1.2e-16 89.4 49 69.4
PSO478G4394 Papaver somniferum HOM05D006437 ORTHO05D007973 1.2e-16 89.4 49 69.4
Pp3c24_9690 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.2e-16 89.4 65 53.8
Pp3c21_13210 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.6e-16 89.0 58 62.1
BcaC05g30279 Brassica carinata HOM05D006437 ORTHO05D007973 2.1e-16 88.6 49 77.6
AUR62023192 Chenopodium quinoa HOM05D006437 ORTHO05D007973 2.8e-16 88.2 49 73.5
Manes.02G074600 Manihot esculenta HOM05D006437 ORTHO05D007973 2.8e-16 88.2 49 75.5
SMO111G0099 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 2.8e-16 88.2 51 70.6
CsaV3_1G027840 Cucumis sativus L. HOM05D006437 ORTHO05D007973 3.6e-16 87.8 49 71.4
CsaV3_3G021640 Cucumis sativus L. HOM05D006437 ORTHO05D007973 3.6e-16 87.8 49 71.4
BraA01t04584Z Brassica rapa HOM05D006437 ORTHO05D007973 4.7e-16 87.4 49 77.6
Mapoly0046s0058 Marchantia polymorpha HOM05D006437 ORTHO05D007973 4.7e-16 87.4 55 67.3
Pp3c23_9530 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.7e-16 87.4 58 62.1
AUR62023239 Chenopodium quinoa HOM05D006437 ORTHO05D007973 6.2e-16 87.0 49 71.4
Pp3c19_9840 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.8e-15 85.5 58 58.6
A10p21920 Brassica napus HOM05D006437 ORTHO05D007973 3.1e-15 84.7 45 75.6
SMO111G0160 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 3.1e-15 84.7 51 68.6
SMO111G0173 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 3.1e-15 84.7 51 68.6
SMO293G0011 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 3.1e-15 84.7 51 68.6
AL288U10020 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 4.0e-15 84.3 49 79.6
C09p59670 Brassica napus HOM05D006437 ORTHO05D007973 4.0e-15 84.3 44 77.3
BolC9t58806H Brassica oleracea HOM05D006437 ORTHO05D007973 4.0e-15 84.3 44 77.3
BraA10t44251Z Brassica rapa HOM05D006437 ORTHO05D007973 4.0e-15 84.3 44 77.3
Lalb_Chr10g0104501 Lupinus albus HOM05D006437 ORTHO05D007973 4.0e-15 84.3 50 70.0
PSO017G3771 Papaver somniferum HOM05D006437 ORTHO05D007973 4.0e-15 84.3 47 72.3
PSO478G0303 Papaver somniferum HOM05D006437 ORTHO05D007973 4.0e-15 84.3 47 72.3
Pp3c4_12160 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.0e-15 84.3 65 49.2
Pp3c8_12730 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.0e-15 84.3 65 52.3
Pp3c8_12731 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.0e-15 84.3 65 52.3
Prupe.3G158900 Prunus persica HOM05D006437 ORTHO05D007973 6.8e-15 83.6 47 72.3
FvH4_5g32381 Fragaria vesca HOM05D006437 ORTHO05D007973 8.9e-15 83.2 44 77.3
SMO111G0149 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 4.4e-14 80.9 50 66.0
SEGI_27045 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 4.4e-14 80.9 47 61.7
MELO3C020291.2 Cucumis melo HOM05D006437 ORTHO05D007973 1.3e-13 79.3 46 71.7
SEGI_20637 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 1.3e-13 79.3 47 59.6
Mapoly0009s0147 Marchantia polymorpha HOM05D006437 ORTHO05D007973 1.4e-12 75.9 52 50.0
Aqoxy7G00636 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 4.6e-11 70.9 41 65.9
Rhsim08G0086000 Rhododendron simsii HOM05D006437 ORTHO05D007973 6.6e-10 67.0 40 70.0
SEGI_23307 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 6.6e-10 67.0 52 55.8
Cre03.g207152 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 2.6e-06 55.1 41 56.1
TAR371G0913 Trochodendron aralioides HOM05D006437 ORTHO05D007973 2.6e-06 55.1 27 81.5


User provided reference genes

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