Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0831 Trochodendron aralioides HOM05D005391 ORTHO05D006694 7.3e-84 313.9 166 100.0
TAR629G0488 Trochodendron aralioides HOM05D005391 ORTHO05D006694 4.1e-63 245.0 164 78.7
Nn4g22289 Nelumbo nucifera HOM05D005391 ORTHO05D006694 2.0e-57 226.1 166 72.9
PSO478G3696 Papaver somniferum HOM05D005391 ORTHO05D006694 9.9e-57 223.8 168 73.2
PSO017G3900 Papaver somniferum HOM05D005391 ORTHO05D006694 1.7e-56 223.0 168 72.6
Dinv23158 Davidia involucrata HOM05D005391 ORTHO05D006694 5.4e-55 218.0 180 66.7
Nn3g16438 Nelumbo nucifera HOM05D005391 ORTHO05D006694 3.0e-53 212.2 166 69.3
vmacro16727 Vaccinium macrocarpon HOM05D005391 ORTHO05D006694 3.1e-50 202.2 175 64.0
CiPaw.11G006200 Carya illinoinensis HOM05D005391 ORTHO05D006694 6.9e-50 201.1 189 62.4
MBI07_g28244_MAGBIO Magnolia biondii HOM05D005391 ORTHO05D006694 6.9e-50 201.1 163 65.0
CiPaw.12G044000 Carya illinoinensis HOM05D005391 ORTHO05D006694 1.2e-49 200.3 191 61.3
TWI14G1436 Tripterygium wilfordii HOM05D005391 ORTHO05D006694 1.3e-48 196.8 186 61.8
CSS0043065 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 2.9e-48 195.7 176 61.9
MD15G1005900 Malus domestica HOM05D005391 ORTHO05D006694 2.9e-48 195.7 183 63.4
Thecc.03G130500 Theobroma cacao HOM05D005391 ORTHO05D006694 3.8e-48 195.3 189 62.4
TWI23G0649 Tripterygium wilfordii HOM05D005391 ORTHO05D006694 4.9e-48 194.9 186 60.8
Actinidia36818 Actinidia chinensis HOM05D005391 ORTHO05D006694 8.4e-48 194.1 176 64.2
MD08G1006700 Malus domestica HOM05D005391 ORTHO05D006694 1.1e-47 193.7 183 61.7
Gorai.001G058300 Gossypium raimondii HOM05D005391 ORTHO05D006694 4.2e-47 191.8 187 62.0
Gohir.A07G050600 Gossypium hirsutum HOM05D005391 ORTHO05D006694 7.1e-47 191.0 187 62.0
Gohir.D07G055100 Gossypium hirsutum HOM05D005391 ORTHO05D006694 1.2e-46 190.3 187 61.5
Atru.chr6.1808 Acer truncatum HOM05D005391 ORTHO05D006694 1.6e-46 189.9 165 62.4
Manes.14G050400 Manihot esculenta HOM05D005391 ORTHO05D006694 1.6e-46 189.9 196 57.7
CANSAT80G1472 Cannabis sativa HOM05D005391 ORTHO05D006694 6.0e-46 188.0 198 58.6
Rhsim12G0176000 Rhododendron simsii HOM05D005391 ORTHO05D006694 1.3e-45 186.8 177 62.7
COL.COLO4_28143 Corchorus olitorius HOM05D005391 ORTHO05D006694 3.9e-45 185.3 190 59.5
Ciclev10032864m.g Citrus clementina HOM05D005391 ORTHO05D006694 8.7e-45 184.1 173 60.7
Prupe.1G358600 Prunus persica HOM05D005391 ORTHO05D006694 8.7e-45 184.1 184 60.3
PGSC0003DMG400026284 Solanum tuberosum HOM05D005391 ORTHO05D006694 3.3e-44 182.2 188 60.1
Sed0002904 Sechium edule HOM05D005391 ORTHO05D006694 5.6e-44 181.4 179 58.7
Cpa.g.sc13.100 Carica papaya HOM05D005391 ORTHO05D006694 9.6e-44 180.6 188 56.4
Lj5A95T81 Lonicera japonica HOM05D005391 ORTHO05D006694 9.6e-44 180.6 204 53.4
Nitab4.5_0000264g0120 Nicotiana tabacum HOM05D005391 ORTHO05D006694 9.6e-44 180.6 184 58.2
Peaxi162Scf00045g01932 Petunia axillaris HOM05D005391 ORTHO05D006694 1.3e-43 180.3 175 60.6
GSVIVG01008565001 Vitis vinifera HOM05D005391 ORTHO05D006694 1.3e-43 180.3 169 62.7
CSS0003205 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 2.8e-43 179.1 182 58.8
CSS0033680 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 2.8e-43 179.1 182 58.8
Lsat_1_v5_gn_4_81240 Lactuca sativa HOM05D005391 ORTHO05D006694 6.2e-43 177.9 174 58.6
CDE04G2377 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 2.4e-42 176.0 164 60.4
MELO3C026202.2 Cucumis melo HOM05D005391 ORTHO05D006694 2.4e-42 176.0 189 56.1
Potri.015G097800 Populus trichocarpa HOM05D005391 ORTHO05D006694 3.1e-42 175.6 188 55.9
CsaV3_1G000500 Cucumis sativus L. HOM05D005391 ORTHO05D006694 4.0e-42 175.3 189 55.6
Potri.012G099200 Populus trichocarpa HOM05D005391 ORTHO05D006694 4.0e-42 175.3 179 59.2
Sabra12G0072400 Salix brachista HOM05D005391 ORTHO05D006694 5.3e-42 174.9 183 57.9
Sopen08g002620 Solanum pennellii HOM05D005391 ORTHO05D006694 2.0e-41 172.9 192 54.2
Cfa018784 Carpinus fangiana HOM05D005391 ORTHO05D006694 2.6e-41 172.6 188 54.3
Cc08_g07550 Coffea canephora HOM05D005391 ORTHO05D006694 4.5e-41 171.8 197 56.3
CDE10G0912 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 5.8e-41 171.4 164 57.9
FAN15G0439 Fragaria x ananassa HOM05D005391 ORTHO05D006694 5.8e-41 171.4 178 57.3
ECA232G1626 Erigeron canadensis HOM05D005391 ORTHO05D006694 7.6e-41 171.0 176 55.1
FvH4_2g37750 Fragaria vesca HOM05D005391 ORTHO05D006694 7.6e-41 171.0 180 57.8
Haze_07152 Corylus avellana HOM05D005391 ORTHO05D006694 9.9e-41 170.6 188 53.7
Solyc08g006670.3 Solanum lycopersicum HOM05D005391 ORTHO05D006694 9.9e-41 170.6 192 54.7
FAN20G0870 Fragaria x ananassa HOM05D005391 ORTHO05D006694 1.7e-40 169.9 178 57.3
Ah.03g143420 Amaranthus hybridus HOM05D005391 ORTHO05D006694 2.9e-40 169.1 176 55.7
AUR62002017 Chenopodium quinoa HOM05D005391 ORTHO05D006694 4.9e-40 168.3 177 55.4
Ca_16053_v3 Cicer arietinum L. HOM05D005391 ORTHO05D006694 4.9e-40 168.3 170 58.2
FAN26G2573 Fragaria x ananassa HOM05D005391 ORTHO05D006694 6.4e-40 167.9 165 56.4
FAN27G0224 Fragaria x ananassa HOM05D005391 ORTHO05D006694 8.4e-40 167.5 179 57.5
TPR.G14215 Trifolium pratense HOM05D005391 ORTHO05D006694 1.1e-39 167.2 171 57.9
AUR62003784 Chenopodium quinoa HOM05D005391 ORTHO05D006694 1.4e-39 166.8 177 54.8
ATR0171G017 Amborella trichopoda HOM05D005391 ORTHO05D006694 1.9e-39 166.4 162 54.9
DCAR_016386 Daucus carota HOM05D005391 ORTHO05D006694 1.9e-39 166.4 183 55.7
Duzib205G0229 Durio zibethinus HOM05D005391 ORTHO05D006694 1.9e-39 166.4 194 51.5
Psat5g051960 Pisum sativum HOM05D005391 ORTHO05D006694 5.4e-39 164.9 172 55.2
Oeu009657.1 Olea europaea HOM05D005391 ORTHO05D006694 7.1e-39 164.5 205 52.2
RcHm_v2.0_Chr6g0303761 Rosa chinensis HOM05D005391 ORTHO05D006694 9.3e-39 164.1 189 54.5
EL10Ac6g15093 Beta vulgaris HOM05D005391 ORTHO05D006694 2.1e-38 162.9 181 53.0
Sp2g26560 Schrenkiella parvula HOM05D005391 ORTHO05D006694 2.1e-38 162.9 179 54.7
BolC3t18550H Brassica oleracea HOM05D005391 ORTHO05D006694 3.5e-38 162.2 179 55.3
Lalb_Chr23g0273681 Lupinus albus HOM05D005391 ORTHO05D006694 3.5e-38 162.2 176 56.8
Phvul.009G165600 Phaseolus vulgaris HOM05D005391 ORTHO05D006694 3.5e-38 162.2 175 54.9
C03p62960 Brassica napus HOM05D005391 ORTHO05D006694 4.6e-38 161.8 179 55.3
CARHR277330 Cardamine hirsuta HOM05D005391 ORTHO05D006694 4.6e-38 161.8 176 56.2
Sabra15G0118500 Salix brachista HOM05D005391 ORTHO05D006694 4.6e-38 161.8 200 51.0
Glyma.04G196600 Glycine max HOM05D005391 ORTHO05D006694 7.9e-38 161.0 167 55.7
Medtr3g099130 Medicago truncatula HOM05D005391 ORTHO05D006694 1.0e-37 160.6 170 55.9
Aa31LG1G18560 Aethionema arabicum HOM05D005391 ORTHO05D006694 1.8e-37 159.8 184 54.3
Aqoxy3G01572 Aquilegia oxysepala HOM05D005391 ORTHO05D006694 1.8e-37 159.8 164 57.9
Hund08624 Selenicereus undatus HOM05D005391 ORTHO05D006694 1.8e-37 159.8 177 54.8
MSTRG.25825 Avicennia marina HOM05D005391 ORTHO05D006694 3.0e-37 159.1 202 50.5
Glyma.06G169200 Glycine max HOM05D005391 ORTHO05D006694 3.0e-37 159.1 168 56.5
A09p08280 Brassica napus HOM05D005391 ORTHO05D006694 6.7e-37 157.9 172 56.4
A06p30110 Brassica napus HOM05D005391 ORTHO05D006694 8.7e-37 157.5 178 55.1
BraA06t25962Z Brassica rapa HOM05D005391 ORTHO05D006694 8.7e-37 157.5 178 55.1
Migut.E01449 Erythranthe guttata HOM05D005391 ORTHO05D006694 1.5e-36 156.8 195 51.8
Lj1g0005006 Lotus japonicus HOM05D005391 ORTHO05D006694 1.5e-36 156.8 175 54.9
THA.LOC104798944 Tarenaya hassleriana HOM05D005391 ORTHO05D006694 1.9e-36 156.4 173 54.9
arahy.Tifrunner.gnm1.ann1.S11VKX Arachis hypogaea HOM05D005391 ORTHO05D006694 2.5e-36 156.0 188 52.7
ClCG06G017970 Citrullus lanatus HOM05D005391 ORTHO05D006694 2.5e-36 156.0 238 44.1
BcaB04g19920 Brassica carinata HOM05D005391 ORTHO05D006694 4.3e-36 155.2 176 52.3
AL8G40540 Arabidopsis lyrata HOM05D005391 ORTHO05D006694 5.6e-36 154.8 181 52.5
BraA09t36478Z Brassica rapa HOM05D005391 ORTHO05D006694 5.6e-36 154.8 172 55.8
QL10p002677 Quercus lobata HOM05D005391 ORTHO05D006694 1.6e-35 153.3 182 50.0
BcaB02g09758 Brassica carinata HOM05D005391 ORTHO05D006694 3.7e-35 152.1 176 52.8
Carub.0008s2418 Capsella rubella HOM05D005391 ORTHO05D006694 8.1e-35 151.0 180 52.2
Thhalv10004987m.g Eutrema salsugineum HOM05D005391 ORTHO05D006694 1.8e-34 149.8 185 50.3
unitig_32.g10935 Utricularia gibba HOM05D005391 ORTHO05D006694 1.8e-34 149.8 203 48.3
arahy.Tifrunner.gnm1.ann1.3A01UJ Arachis hypogaea HOM05D005391 ORTHO05D006694 4.0e-34 148.7 196 50.5
SGA_v2.0_scaffold169G38603 Striga asiatica HOM05D005391 ORTHO05D006694 1.5e-33 146.7 185 51.4
Aqoxy3G00618 Aquilegia oxysepala HOM05D005391 ORTHO05D006694 5.8e-33 144.8 175 52.0
AT5G63480 Arabidopsis thaliana HOM05D005391 ORTHO05D006694 1.3e-32 143.7 181 49.2
SalBow8G3527 Salvia bowleyana HOM05D005391 ORTHO05D006694 2.2e-32 142.9 193 48.7
BolC9t53848H Brassica oleracea HOM05D005391 ORTHO05D006694 1.4e-31 140.2 169 52.7
Zm00001eb421130 Zea mays HOM05D005391 ORTHO05D006694 4.2e-31 138.7 173 48.6
Nitab4.5_0001362g0010 Nicotiana tabacum HOM05D005391 ORTHO05D006694 1.6e-30 136.7 187 47.1
Actinidia08882 Actinidia chinensis HOM05D005391 ORTHO05D006694 2.1e-30 136.3 146 56.2
arahy.Tifrunner.gnm1.ann1.CP8X4X Arachis hypogaea HOM05D005391 ORTHO05D006694 3.5e-30 135.6 230 43.0
arahy.Tifrunner.gnm1.ann1.HT4698 Arachis hypogaea HOM05D005391 ORTHO05D006694 3.5e-30 135.6 230 43.0
HanXRQChr09g0273301 Helianthus annuus HOM05D005391 ORTHO05D006694 6.0e-30 134.8 138 55.8
BcaC04g23332 Brassica carinata HOM05D005391 ORTHO05D006694 1.8e-29 133.3 169 52.1
C09p09360 Brassica napus HOM05D005391 ORTHO05D006694 1.8e-29 133.3 169 52.1
SEGI_01116 Sequoiadendron giganteum HOM05D005391 ORTHO05D006694 4.8e-27 125.2 163 47.9
Sc04g0000550 Simmondsia chinensis HOM05D005391 ORTHO05D006694 1.1e-26 124.0 131 58.0
Ah.07g204620 Amaranthus hybridus HOM05D005391 ORTHO05D006694 1.5e-25 120.2 143 51.0
DCAR_021623 Daucus carota HOM05D005391 ORTHO05D006694 5.0e-24 115.2 160 42.5
HPP92_023119 Vanilla planifolia HOM05D005391 ORTHO05D006694 5.0e-24 115.2 178 45.5
FAN23G2258 Fragaria x ananassa HOM05D005391 ORTHO05D006694 1.4e-23 113.6 132 51.5
CSS0010891 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 2.5e-23 112.8 110 59.1
Mapoly0007s0225 Marchantia polymorpha HOM05D005391 ORTHO05D006694 3.0e-21 105.9 161 42.2
Oeu040668.1 Olea europaea HOM05D005391 ORTHO05D006694 6.7e-21 104.8 146 45.2
Ca_01190_v3 Cicer arietinum L. HOM05D005391 ORTHO05D006694 1.1e-20 104.0 147 47.6
VMungo1309G0665 Vigna mungo HOM05D005391 ORTHO05D006694 6.3e-19 98.2 110 52.7
FAN23G0903 Fragaria x ananassa HOM05D005391 ORTHO05D006694 8.2e-19 97.8 161 42.9
Pp3c7_3280 Physcomitrium patens HOM05D005391 ORTHO05D006694 1.4e-18 97.1 182 37.9
SMO364G0653 Selaginella moellendorffii HOM05D005391 ORTHO05D006694 9.0e-18 94.4 153 35.9
Gohir.1Z049409 Gossypium hirsutum HOM05D005391 ORTHO05D006694 2.9e-16 89.4 118 50.8
CSS0049043 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 4.2e-15 85.5 67 64.2
AagrBONN_evm.TU.Sc2ySwM_369.268 Anthoceros agrestis HOM05D005391 ORTHO05D006694 2.7e-14 82.8 163 36.2
Os04g0388601 Oryza sativa ssp. japonica HOM05D005391 ORTHO05D006694 3.3e-12 75.9 163 37.4
Zm00001eb085410 Zea mays HOM05D005391 ORTHO05D006694 1.0e-08 64.3 114 37.7
SEGI_13536 Sequoiadendron giganteum HOM05D005391 ORTHO05D006694 1.3e-08 63.9 90 43.3
Hund13632 Selenicereus undatus HOM05D005391 ORTHO05D006694 1.4e-07 60.5 142 33.1
CDE10G0174 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 1.9e-07 60.1 68 48.5


User provided reference genes

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