Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0737 Trochodendron aralioides HOM05D007154 ORTHO05D008945 4.4e-74 281.2 140 100.0
TAR622G0969 Trochodendron aralioides HOM05D007154 ORTHO05D008945 2.4e-48 195.7 139 75.5
TAR371G0017 Trochodendron aralioides HOM05D007154 ORTHO05D008945 3.2e-48 195.3 109 88.1
TAR627G0850 Trochodendron aralioides HOM05D007154 ORTHO05D008945 2.9e-41 172.2 100 85.0
Nn3g18537 Nelumbo nucifera HOM05D007154 ORTHO05D008945 2.3e-38 162.5 110 72.7
Dinv01916 Davidia involucrata HOM05D007154 ORTHO05D008945 1.6e-36 156.4 119 66.4
Cfa018670 Carpinus fangiana HOM05D007154 ORTHO05D008945 2.4e-35 152.5 119 63.9
Ciclev10016869m.g Citrus clementina HOM05D007154 ORTHO05D008945 5.3e-35 151.4 111 66.7
PSO063G0981 Papaver somniferum HOM05D007154 ORTHO05D008945 6.9e-35 151.0 111 64.0
PSO782G0712 Papaver somniferum HOM05D007154 ORTHO05D008945 6.9e-35 151.0 111 64.0
Potri.010G254600 Populus trichocarpa HOM05D007154 ORTHO05D008945 9.0e-35 150.6 119 62.2
Atru.chr11.40 Acer truncatum HOM05D007154 ORTHO05D008945 2.0e-34 149.4 127 61.4
ATR0124G040 Amborella trichopoda HOM05D007154 ORTHO05D008945 4.5e-34 148.3 111 65.8
Ah.10g037940 Amaranthus hybridus HOM05D007154 ORTHO05D008945 5.8e-34 147.9 133 56.4
GSVIVG01034352001 Vitis vinifera HOM05D007154 ORTHO05D008945 7.6e-34 147.5 109 66.1
TWI53G1167 Tripterygium wilfordii HOM05D007154 ORTHO05D008945 1.3e-33 146.7 115 64.3
CiPaw.16G000700 Carya illinoinensis HOM05D007154 ORTHO05D008945 1.7e-33 146.4 115 65.2
Sabra10G0198000 Salix brachista HOM05D007154 ORTHO05D008945 1.7e-33 146.4 119 60.5
Thecc.02G152200 Theobroma cacao HOM05D007154 ORTHO05D008945 1.7e-33 146.4 109 64.2
Manes.04G160900 Manihot esculenta HOM05D007154 ORTHO05D008945 3.8e-33 145.2 118 62.7
Prupe.1G351600 Prunus persica HOM05D007154 ORTHO05D008945 3.8e-33 145.2 126 58.7
EL10Ac2g04490 Beta vulgaris HOM05D007154 ORTHO05D008945 8.4e-33 144.1 109 63.3
Aa31LG11G2830 Aethionema arabicum HOM05D007154 ORTHO05D008945 1.1e-32 143.7 112 61.6
Actinidia04367 Actinidia chinensis HOM05D007154 ORTHO05D008945 2.4e-32 142.5 118 62.7
VMungo0331G0746 Vigna mungo HOM05D007154 ORTHO05D008945 2.4e-32 142.5 131 52.7
PGSC0003DMG400025308 Solanum tuberosum HOM05D007154 ORTHO05D008945 3.2e-32 142.1 110 62.7
Aqoxy3G04335 Aquilegia oxysepala HOM05D007154 ORTHO05D008945 4.2e-32 141.7 86 74.4
CSS0036440 Camellia sinensis var. sinensis HOM05D007154 ORTHO05D008945 9.3e-32 140.6 117 59.0
MD13G1001100 Malus domestica HOM05D007154 ORTHO05D008945 9.3e-32 140.6 111 61.3
QL01p000323 Quercus lobata HOM05D007154 ORTHO05D008945 1.6e-31 139.8 116 58.6
RcHm_v2.0_Chr4g0447181 Rosa chinensis HOM05D007154 ORTHO05D008945 1.6e-31 139.8 110 61.8
HPP92_026886 Vanilla planifolia HOM05D007154 ORTHO05D008945 2.1e-31 139.4 112 64.3
COL.COLO4_33150 Corchorus olitorius HOM05D007154 ORTHO05D008945 2.7e-31 139.0 122 56.6
Solyc04g008770.3 Solanum lycopersicum HOM05D007154 ORTHO05D008945 2.7e-31 139.0 110 63.6
Sopen04g003950 Solanum pennellii HOM05D007154 ORTHO05D008945 2.7e-31 139.0 110 63.6
CDE04G0025 Ceratophyllum demersum HOM05D007154 ORTHO05D008945 3.5e-31 138.7 120 55.8
DCAR_030346 Daucus carota HOM05D007154 ORTHO05D008945 3.5e-31 138.7 123 57.7
Oeu019256.1 Olea europaea HOM05D007154 ORTHO05D008945 3.5e-31 138.7 114 60.5
Eucgr.G02613 Eucalyptus grandis HOM05D007154 ORTHO05D008945 4.6e-31 138.3 118 57.6
AL6G34660 Arabidopsis lyrata HOM05D007154 ORTHO05D008945 1.0e-30 137.1 102 60.8
AUR62023245 Chenopodium quinoa HOM05D007154 ORTHO05D008945 1.0e-30 137.1 111 62.2
MELO3C005082.2 Cucumis melo HOM05D007154 ORTHO05D008945 1.0e-30 137.1 99 64.6
Peaxi162Scf00329g00212 Petunia axillaris HOM05D007154 ORTHO05D008945 1.0e-30 137.1 116 60.3
AUR62023198 Chenopodium quinoa HOM05D007154 ORTHO05D008945 1.3e-30 136.7 111 60.4
Thhalv10005037m.g Eutrema salsugineum HOM05D007154 ORTHO05D008945 1.3e-30 136.7 137 51.1
A06p34370 Brassica napus HOM05D007154 ORTHO05D008945 1.8e-30 136.3 135 54.8
BraA06t26367Z Brassica rapa HOM05D007154 ORTHO05D008945 1.8e-30 136.3 135 54.8
ClCG01G007940 Citrullus lanatus HOM05D007154 ORTHO05D008945 1.8e-30 136.3 113 62.8
SalBow4G2238 Salvia bowleyana HOM05D007154 ORTHO05D008945 1.8e-30 136.3 124 57.3
Sed0008143 Sechium edule HOM05D007154 ORTHO05D008945 1.8e-30 136.3 125 57.6
Carub.0006s2118 Capsella rubella HOM05D007154 ORTHO05D008945 3.0e-30 135.6 124 54.8
Gorai.012G136600 Gossypium raimondii HOM05D007154 ORTHO05D008945 3.9e-30 135.2 109 59.6
Lalb_Chr01g0013651 Lupinus albus HOM05D007154 ORTHO05D008945 3.9e-30 135.2 114 57.0
CANSAT78G1733 Cannabis sativa HOM05D007154 ORTHO05D008945 5.1e-30 134.8 121 57.0
CAN.G419.16 Capsicum annuum HOM05D007154 ORTHO05D008945 6.7e-30 134.4 116 60.3
Sc10g0006590 Simmondsia chinensis HOM05D007154 ORTHO05D008945 6.7e-30 134.4 109 58.7
THA.LOC104800635 Tarenaya hassleriana HOM05D007154 ORTHO05D008945 1.1e-29 133.7 126 54.8
Cc00_g03880 Coffea canephora HOM05D007154 ORTHO05D008945 1.5e-29 133.3 131 53.4
AT5G23395 Arabidopsis thaliana HOM05D007154 ORTHO05D008945 2.5e-29 132.5 132 50.8
BcaNung03727 Brassica carinata HOM05D007154 ORTHO05D008945 4.3e-29 131.7 135 53.3
C07p44160 Brassica napus HOM05D007154 ORTHO05D008945 4.3e-29 131.7 135 53.3
BolC7t44940H Brassica oleracea HOM05D007154 ORTHO05D008945 4.3e-29 131.7 135 53.3
Duzib248G1404 Durio zibethinus HOM05D007154 ORTHO05D008945 5.6e-29 131.3 103 61.2
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 5.6e-29 131.3 140 51.4
TPR.G36620 Trifolium pratense HOM05D007154 ORTHO05D008945 7.4e-29 131.0 131 48.1
FAN17G3039 Fragaria x ananassa HOM05D007154 ORTHO05D008945 9.6e-29 130.6 109 59.6
Phvul.010G129500 Phaseolus vulgaris HOM05D007154 ORTHO05D008945 9.6e-29 130.6 124 52.4
Os04g0527700 Oryza sativa ssp. japonica HOM05D007154 ORTHO05D008945 2.1e-28 129.4 109 56.9
HPP92_003488 Vanilla planifolia HOM05D007154 ORTHO05D008945 2.1e-28 129.4 100 64.0
ECA240G2562 Erigeron canadensis HOM05D007154 ORTHO05D008945 2.8e-28 129.0 114 57.0
Gohir.D04G150000 Gossypium hirsutum HOM05D007154 ORTHO05D008945 2.8e-28 129.0 111 57.7
CsaV3_5G021910 Cucumis sativus L. HOM05D007154 ORTHO05D008945 6.2e-28 127.9 113 57.5
Ca_23384_v3 Cicer arietinum L. HOM05D007154 ORTHO05D008945 1.1e-27 127.1 108 54.6
FAN07G0022 Fragaria x ananassa HOM05D007154 ORTHO05D008945 1.4e-27 126.7 109 57.8
Sp2g23770 Schrenkiella parvula HOM05D007154 ORTHO05D008945 1.4e-27 126.7 95 61.1
Migut.B01210 Erythranthe guttata HOM05D007154 ORTHO05D008945 1.8e-27 126.3 115 54.8
Glyma.07G039300 Glycine max HOM05D007154 ORTHO05D008945 1.8e-27 126.3 109 56.0
Lsat_1_v5_gn_9_117140 Lactuca sativa HOM05D007154 ORTHO05D008945 2.4e-27 125.9 84 72.6
Lj3g0022846 Lotus japonicus HOM05D007154 ORTHO05D008945 3.1e-27 125.6 109 54.1
arahy.Tifrunner.gnm1.ann1.408I3G Arachis hypogaea HOM05D007154 ORTHO05D008945 4.0e-27 125.2 84 64.3
arahy.Tifrunner.gnm1.ann1.JHQS48 Arachis hypogaea HOM05D007154 ORTHO05D008945 4.0e-27 125.2 84 64.3
Medtr8g020800 Medicago truncatula HOM05D007154 ORTHO05D008945 5.3e-27 124.8 83 63.9
HanXRQChr13g0420721 Helianthus annuus HOM05D007154 ORTHO05D008945 6.9e-27 124.4 82 68.3
PGR142G2984 Punica granatum HOM05D007154 ORTHO05D008945 1.2e-26 123.6 88 64.8
Hund16199 Selenicereus undatus HOM05D007154 ORTHO05D008945 4.5e-26 121.7 134 47.0
Gohir.A04G109800 Gossypium hirsutum HOM05D007154 ORTHO05D008945 7.6e-26 120.9 109 54.1
Psat4g220160 Pisum sativum HOM05D007154 ORTHO05D008945 9.9e-26 120.6 108 51.9
Nitab4.5_0007445g0030 Nicotiana tabacum HOM05D007154 ORTHO05D008945 1.3e-25 120.2 78 67.9
Nitab4.5_0011708g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 1.3e-25 120.2 78 69.2
Nitab4.5_0002707g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 1.7e-25 119.8 78 67.9
vmacro16164 Vaccinium macrocarpon HOM05D007154 ORTHO05D008945 2.9e-25 119.0 106 54.7
Lj3C844G3 Lonicera japonica HOM05D007154 ORTHO05D008945 1.4e-24 116.7 110 52.7
SGA_v2.0_scaffold166G38315 Striga asiatica HOM05D007154 ORTHO05D008945 1.4e-24 116.7 109 53.2
FvH4_4g37330 Fragaria vesca HOM05D007154 ORTHO05D008945 2.7e-23 112.5 64 75.0
CARHR190110 Cardamine hirsuta HOM05D007154 ORTHO05D008945 4.6e-23 111.7 65 72.3
unitig_61.g26453 Utricularia gibba HOM05D007154 ORTHO05D008945 4.6e-23 111.7 129 49.6
Zm00001eb427080 Zea mays HOM05D007154 ORTHO05D008945 4.6e-23 111.7 124 46.8
Cpa.g.sc221.16 Carica papaya HOM05D007154 ORTHO05D008945 1.3e-22 110.2 65 72.3
SGA_v2.0_scaffold249G44952 Striga asiatica HOM05D007154 ORTHO05D008945 1.8e-22 109.8 109 52.3
Haze_17398 Corylus avellana HOM05D007154 ORTHO05D008945 8.7e-22 107.5 113 52.2
Zm00001eb076710 Zea mays HOM05D007154 ORTHO05D008945 2.5e-21 105.9 77 58.4
Glyma.16G008100 Glycine max HOM05D007154 ORTHO05D008945 5.6e-21 104.8 68 67.6
SHI21164 Sapria himalayana HOM05D007154 ORTHO05D008945 1.1e-19 100.5 79 59.5
Duzib051G0001 Durio zibethinus HOM05D007154 ORTHO05D008945 3.4e-18 95.5 87 56.3
Pp3c11_17450 Physcomitrium patens HOM05D007154 ORTHO05D008945 2.9e-17 92.4 106 41.5
SEGI_35140 Sequoiadendron giganteum HOM05D007154 ORTHO05D008945 1.1e-11 73.9 64 53.1
AagrBONN_evm.TU.Sc2ySwM_362.2201 Anthoceros agrestis HOM05D007154 ORTHO05D008945 7.6e-10 67.8 69 44.9
Oeu037446.1 Olea europaea HOM05D007154 ORTHO05D008945 2.9e-09 65.9 41 68.3
Cfa026739 Carpinus fangiana HOM05D007154 ORTHO05D008945 5.0e-09 65.1 54 40.7
MCO07G261 Micromonas commoda HOM05D007154 ORTHO05D008945 1.1e-08 63.9 77 40.3
Mapoly0093s0036 Marchantia polymorpha HOM05D007154 ORTHO05D008945 5.5e-08 61.6 102 33.3


User provided reference genes

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