Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0734 Trochodendron aralioides HOM05D007169 ORTHO05D007243 1.1e-156 556.6 282 100.0
Nn3g16473 Nelumbo nucifera HOM05D007169 ORTHO05D007243 1.4e-79 300.4 258 61.6
TAR374G1569 Trochodendron aralioides HOM05D007169 ORTHO05D007243 5.2e-74 282.0 285 56.5
TAR622G0369 Trochodendron aralioides HOM05D007169 ORTHO05D007243 7.0e-71 271.6 286 54.9
Phvul.009G166500 Phaseolus vulgaris HOM05D007169 ORTHO05D007243 1.5e-60 237.3 210 56.2
Glyma.06G170200 Glycine max HOM05D007169 ORTHO05D007243 3.3e-60 236.1 230 53.0
Hma1.2p1_0014F.1_g009470 Hydrangea macrophylla HOM05D007169 ORTHO05D007243 9.5e-60 234.6 224 54.0
Prupe.5G151300 Prunus persica HOM05D007169 ORTHO05D007243 1.8e-58 230.3 230 53.9
RhsimUnG0231000 Rhododendron simsii HOM05D007169 ORTHO05D007243 1.5e-57 227.3 232 49.1
Ca_16044_v3 Cicer arietinum L. HOM05D007169 ORTHO05D007243 1.3e-56 224.2 227 52.4
Lj1g0026378 Lotus japonicus HOM05D007169 ORTHO05D007243 2.9e-56 223.0 207 53.6
ClCG03G003730 Citrullus lanatus HOM05D007169 ORTHO05D007243 2.1e-54 216.9 227 53.3
Manes.01G190300 Manihot esculenta HOM05D007169 ORTHO05D007243 2.7e-54 216.5 256 48.4
TPR.G14220 Trifolium pratense HOM05D007169 ORTHO05D007243 2.7e-54 216.5 216 50.5
MELO3C002358.2 Cucumis melo HOM05D007169 ORTHO05D007243 4.6e-54 215.7 264 49.6
CsaV3_1G009620 Cucumis sativus L. HOM05D007169 ORTHO05D007243 4.6e-54 215.7 258 49.6
TWI23G0849 Tripterygium wilfordii HOM05D007169 ORTHO05D007243 6.0e-54 215.3 239 49.8
arahy.Tifrunner.gnm1.ann1.NVZ1RT Arachis hypogaea HOM05D007169 ORTHO05D007243 7.8e-54 214.9 212 52.4
arahy.Tifrunner.gnm1.ann1.ZT3MCZ Arachis hypogaea HOM05D007169 ORTHO05D007243 7.8e-54 214.9 212 52.4
Potri.012G097500 Populus trichocarpa HOM05D007169 ORTHO05D007243 7.8e-54 214.9 224 51.8
Potri.015G096000 Populus trichocarpa HOM05D007169 ORTHO05D007243 1.7e-53 213.8 234 50.9
Psat5g051240 Pisum sativum HOM05D007169 ORTHO05D007243 2.3e-53 213.4 209 52.2
Dinv23144 Davidia involucrata HOM05D007169 ORTHO05D007243 3.0e-53 213.0 190 56.3
CiPaw.12G042700 Carya illinoinensis HOM05D007169 ORTHO05D007243 3.9e-53 212.6 234 50.0
Thecc.03G128900 Theobroma cacao HOM05D007169 ORTHO05D007243 1.1e-52 211.1 240 48.3
Duzib068G0521 Durio zibethinus HOM05D007169 ORTHO05D007243 1.5e-52 210.7 236 49.2
Sabra15G0116800 Salix brachista HOM05D007169 ORTHO05D007243 1.5e-52 210.7 241 47.7
Gohir.D09G247400 Gossypium hirsutum HOM05D007169 ORTHO05D007243 1.2e-51 207.6 237 48.1
Gorai.006G271900 Gossypium raimondii HOM05D007169 ORTHO05D007243 1.2e-51 207.6 237 48.1
Gohir.A09G246900 Gossypium hirsutum HOM05D007169 ORTHO05D007243 2.1e-51 206.8 237 47.7
QL10p002966 Quercus lobata HOM05D007169 ORTHO05D007243 6.2e-51 205.3 242 48.8
GSVIVG01008542001 Vitis vinifera HOM05D003858 ORTHO05D005878 1.4e-50 204.1 229 51.5
Medtr3g099350 Medicago truncatula HOM05D007169 ORTHO05D007243 1.8e-50 203.8 212 49.1
RcHm_v2.0_Chr7g0190221 Rosa chinensis HOM05D007169 ORTHO05D007243 1.8e-50 203.8 216 47.2
Atru.chr9.1127 Acer truncatum HOM05D007169 ORTHO05D007243 2.3e-50 203.4 216 50.0
Aqoxy3G00802 Aquilegia oxysepala HOM05D007169 ORTHO05D007243 2.3e-50 203.4 236 50.4
Ciclev10018838m.g Citrus clementina HOM05D003858 ORTHO05D005878 4.0e-50 202.6 219 49.8
Cpa.g.sc13.118 Carica papaya HOM05D007169 ORTHO05D007243 1.2e-49 201.1 237 47.7
VMungo1309G2045 Vigna mungo HOM05D007169 ORTHO05D007243 1.2e-49 201.1 184 53.8
Lalb_Chr08g0237141 Lupinus albus HOM05D007169 ORTHO05D007243 2.6e-49 199.9 229 47.6
PSO478G3704 Papaver somniferum HOM05D007169 ORTHO05D007243 7.6e-49 198.4 253 44.3
FvH4_5g08300 Fragaria vesca HOM05D007169 ORTHO05D007243 9.9e-49 198.0 211 47.4
Sed0023866 Sechium edule HOM05D007169 ORTHO05D007243 1.4e-47 194.1 227 49.3
Cfa018798 Carpinus fangiana HOM05D007169 ORTHO05D007243 3.2e-47 193.0 203 50.7
Rhsim08G0190100 Rhododendron simsii HOM05D007169 ORTHO05D007243 3.2e-47 193.0 183 51.4
CANSAT80G1416 Cannabis sativa HOM05D007169 ORTHO05D007243 4.1e-47 192.6 233 48.5
MD14G1157400 Malus domestica HOM05D007169 ORTHO05D007243 9.2e-47 191.4 271 40.6
PSO017G4677 Papaver somniferum HOM05D007169 ORTHO05D007243 9.2e-47 191.4 274 40.5
Eucgr.K02727 Eucalyptus grandis HOM05D007169 ORTHO05D007243 2.7e-46 189.9 227 46.3
PGR044G0546 Punica granatum HOM05D007169 ORTHO05D007243 3.5e-46 189.5 222 43.7
Haze_07134 Corylus avellana HOM05D007169 ORTHO05D007243 4.6e-46 189.1 203 50.2
Sed0005692 Sechium edule HOM05D007169 ORTHO05D007243 4.6e-46 189.1 245 45.3
Aa31LG3G6930 Aethionema arabicum HOM05D007169 ORTHO05D007243 1.0e-45 188.0 239 45.2
FAN04G2393 Fragaria x ananassa HOM05D007169 ORTHO05D007243 1.0e-45 188.0 220 45.9
ATR0561G062 Amborella trichopoda HOM05D011398 ORTHO05D007243 1.3e-45 187.6 223 45.3
Medtr2g045120 Medicago truncatula HOM05D007169 ORTHO05D007243 3.0e-45 186.4 183 51.9
AT5G50410 Arabidopsis thaliana HOM05D007169 ORTHO05D007243 5.1e-45 185.7 245 44.5
HanXRQChr02g0034741 Helianthus annuus HOM05D007169 ORTHO05D007243 5.1e-45 185.7 242 42.1
Medtr2g445400 Medicago truncatula HOM05D007169 ORTHO05D007243 5.1e-45 185.7 173 52.0
FAN18G0310 Fragaria x ananassa HOM05D007169 ORTHO05D007243 8.6e-45 184.9 217 45.6
Lsat_1_v5_gn_1_28980 Lactuca sativa HOM05D007169 ORTHO05D007243 2.5e-44 183.3 240 43.8
MD06G1142100 Malus domestica HOM05D007169 ORTHO05D007243 3.3e-44 183.0 263 40.3
Actinidia18344 Actinidia chinensis HOM05D007169 ORTHO05D007243 4.3e-44 182.6 145 60.0
Gorai.004G276100 Gossypium raimondii HOM05D007169 ORTHO05D007243 7.3e-44 181.8 202 48.0
Lalb_Chr23g0273701 Lupinus albus HOM05D007169 ORTHO05D007243 7.3e-44 181.8 218 47.2
Sc04g0000670 Simmondsia chinensis HOM05D007169 ORTHO05D007243 1.2e-43 181.0 223 47.1
CSS0048648 Camellia sinensis var. sinensis HOM05D007169 ORTHO05D007243 2.1e-43 180.3 157 60.5
AL8G24630 Arabidopsis lyrata HOM05D007169 ORTHO05D007243 8.1e-43 178.3 246 43.1
vmacro07808 Vaccinium macrocarpon HOM05D007169 ORTHO05D007243 1.4e-42 177.6 227 41.4
Carub.0008s1052 Capsella rubella HOM05D007169 ORTHO05D007243 1.8e-42 177.2 244 42.6
DCAR_016391 Daucus carota HOM05D007169 ORTHO05D007243 4.0e-42 176.0 175 46.3
DCAR_021617 Daucus carota HOM05D007169 ORTHO05D007243 4.0e-42 176.0 211 44.1
Lj5A96T48 Lonicera japonica HOM05D007169 ORTHO05D007243 4.0e-42 176.0 152 55.9
Thhalv10014456m.g Eutrema salsugineum HOM05D007169 ORTHO05D007243 8.9e-42 174.9 240 42.1
THA.LOC104803148 Tarenaya hassleriana HOM05D007169 ORTHO05D007243 4.4e-41 172.6 242 41.3
Sp6g12560 Schrenkiella parvula HOM05D007169 ORTHO05D007243 2.9e-40 169.9 239 42.7
SpUn0015_0080 Schrenkiella parvula HOM05D007169 ORTHO05D007243 2.9e-40 169.9 239 42.7
SpUn0039_0020 Schrenkiella parvula HOM05D007169 ORTHO05D007243 2.9e-40 169.9 239 42.7
Gohir.D08G258666 Gossypium hirsutum HOM05D007169 ORTHO05D007243 1.4e-39 167.5 148 55.4
CANSAT80G0844 Cannabis sativa HOM05D007169 ORTHO05D007243 1.9e-39 167.2 153 54.9
A02p12790 Brassica napus HOM05D007169 ORTHO05D007243 7.1e-39 165.2 237 41.8
BraA02t06336Z Brassica rapa HOM05D007169 ORTHO05D007243 7.1e-39 165.2 237 41.8
BolC2t08225H Brassica oleracea HOM05D007169 ORTHO05D007243 3.5e-38 162.9 237 41.8
C02p20850 Brassica napus HOM05D007169 ORTHO05D007243 4.6e-38 162.5 237 41.8
Gorai.008G206100 Gossypium raimondii HOM05D007169 ORTHO05D007243 6.0e-38 162.2 207 43.0
ECA247G3219 Erigeron canadensis HOM05D007169 ORTHO05D007243 7.8e-38 161.8 223 41.7
Gohir.D12G191801 Gossypium hirsutum HOM05D007169 ORTHO05D007243 7.8e-38 161.8 207 42.5
BcaB05g24052 Brassica carinata HOM05D007169 ORTHO05D007243 1.0e-37 161.4 239 39.7
BcaC03g14651 Brassica carinata HOM05D007169 ORTHO05D007243 1.3e-37 161.0 242 42.6
HPP92_011766 Vanilla planifolia HOM05D007169 ORTHO05D007243 1.5e-36 157.5 197 45.2
AUR62029615 Chenopodium quinoa HOM05D007169 ORTHO05D007243 1.2e-33 147.9 146 54.1
HPP92_011770 Vanilla planifolia HOM05D007169 ORTHO05D007243 1.7e-32 144.1 269 35.7
EL10Ac5g11418 Beta vulgaris HOM05D007169 ORTHO05D007243 3.2e-31 139.8 145 52.4
Cc06_g22780 Coffea canephora HOM05D007169 ORTHO05D007243 1.6e-30 137.5 146 52.1
Peaxi162Scf00089g01624 Petunia axillaris HOM05D007169 ORTHO05D007243 1.6e-30 137.5 146 51.4
CAN.G338.2 Capsicum annuum HOM05D007169 ORTHO05D007243 2.7e-30 136.7 148 50.7
SalBow5G4624 Salvia bowleyana HOM05D007169 ORTHO05D007243 1.0e-29 134.8 134 52.2
Solyc03g112570.2 Solanum lycopersicum HOM05D007169 ORTHO05D007243 3.9e-29 132.9 137 54.7
SalBow5G3517 Salvia bowleyana HOM05D007169 ORTHO05D007243 5.1e-29 132.5 134 51.5
Sopen03g031630 Solanum pennellii HOM05D007169 ORTHO05D007243 5.1e-29 132.5 139 52.5
Oeu006492.1 Olea europaea HOM05D007169 ORTHO05D007243 1.5e-28 131.0 134 50.7
PGSC0003DMG400018172 Solanum tuberosum HOM05D007169 ORTHO05D007243 1.5e-28 131.0 137 52.6
MSTRG.11390 Avicennia marina HOM05D007169 ORTHO05D007243 9.6e-28 128.3 134 50.7
FAN08G0105 Fragaria x ananassa HOM05D007169 ORTHO05D007243 2.8e-27 126.7 127 49.6
SGA_v2.0_scaffold56G20032 Striga asiatica HOM05D007169 ORTHO05D007243 2.8e-27 126.7 132 50.8
Ah.02g111120 Amaranthus hybridus HOM05D007169 ORTHO05D007243 3.6e-27 126.3 139 51.1
Migut.I00155 Erythranthe guttata HOM05D007169 ORTHO05D007243 1.1e-26 124.8 134 49.3
Os08g0531200 Oryza sativa ssp. japonica HOM05D011398 ORTHO05D007243 1.1e-26 124.8 222 37.8
unitig_0.g2530 Utricularia gibba HOM05D007169 ORTHO05D007243 3.4e-25 119.8 146 43.8
CARHR257950 Cardamine hirsuta HOM05D007169 ORTHO05D007243 2.9e-24 116.7 240 32.5
COL.COLO4_28120 Corchorus olitorius HOM05D007169 ORTHO05D007243 2.9e-24 116.7 231 33.8
Zm00001eb175120 Zea mays HOM05D011398 ORTHO05D007243 1.1e-23 114.8 190 39.5
Hund26053 Selenicereus undatus HOM05D007169 ORTHO05D007243 1.4e-23 114.4 100 59.0
SEGI_24222 Sequoiadendron giganteum HOM05D007169 ORTHO05D007243 1.9e-23 114.0 118 48.3
Nitab4.5_0011992g0030 Nicotiana tabacum HOM05D007169 ORTHO05D007243 2.1e-22 110.5 144 44.4
arahy.Tifrunner.gnm1.ann1.M1N3UH Arachis hypogaea HOM05D002218 ORTHO05D007243 5.8e-17 92.4 69 62.3
Sabra12G0071300 Salix brachista HOM05D000677 ORTHO05D000727 8.4e-16 88.6 136 39.7
Mapoly0022s0039 Marchantia polymorpha HOM05D011398 ORTHO05D007243 1.3e-13 81.3 82 46.3
CBR_g46730 Chara braunii HOM05D011398 ORTHO05D007243 1.5e-09 67.8 97 40.2
CBR_g30247 Chara braunii HOM05D011398 ORTHO05D007243 1.1e-07 61.6 128 29.7
Pp3c9_18230 Physcomitrium patens HOM05D011398 ORTHO05D007243 5.5e-07 59.3 89 34.8


User provided reference genes

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