Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0727 Trochodendron aralioides HOM05D005225 ORTHO05D006830 2.4e-84 315.5 157 100.0
TAR629G1144 Trochodendron aralioides HOM05D005225 ORTHO05D006830 5.9e-43 177.9 237 46.8
Dinv34052 Davidia involucrata HOM05D005225 ORTHO05D006830 1.4e-39 166.8 237 44.7
CSS0031076 Camellia sinensis var. sinensis HOM05D005225 ORTHO05D006830 1.8e-39 166.4 208 46.6
Psat2g131720 Pisum sativum HOM05D005225 ORTHO05D006830 5.2e-39 164.9 237 41.4
TPR.G23155 Trifolium pratense HOM05D005225 ORTHO05D006830 5.2e-39 164.9 244 40.6
Nn2g15478 Nelumbo nucifera HOM05D005225 ORTHO05D006830 2.0e-38 162.9 237 42.6
TPR.G23738 Trifolium pratense HOM05D005225 ORTHO05D006830 9.7e-38 160.6 242 40.1
Actinidia00572 Actinidia chinensis HOM05D005225 ORTHO05D006830 8.2e-37 157.5 237 41.8
Manes.10G001000 Manihot esculenta HOM05D005225 ORTHO05D006830 1.1e-36 157.1 237 41.4
Ca_05000_v3 Cicer arietinum L. HOM05D005225 ORTHO05D006830 1.4e-36 156.8 243 39.9
Aqoxy6G03037 Aquilegia oxysepala HOM05D005225 ORTHO05D006830 4.1e-36 155.2 237 42.2
Duzib251G0330 Durio zibethinus HOM05D005225 ORTHO05D006830 7.0e-36 154.5 237 39.2
Cpa.g.sc1.153 Carica papaya HOM05D005225 ORTHO05D006830 9.1e-36 154.1 243 40.7
CSS0003869 Camellia sinensis var. sinensis HOM05D005225 ORTHO05D006830 1.2e-35 153.7 237 40.9
Lj2g0003273 Lotus japonicus HOM05D005225 ORTHO05D006830 1.6e-35 153.3 237 39.7
Thecc.02G327800 Theobroma cacao HOM05D005225 ORTHO05D006830 1.6e-35 153.3 237 40.5
FvH4_4g10620 Fragaria vesca HOM05D005225 ORTHO05D006830 2.0e-35 152.9 243 39.9
FAN12G0824 Fragaria x ananassa HOM05D005225 ORTHO05D006830 2.0e-35 152.9 243 39.9
FAN17G1346 Fragaria x ananassa HOM05D005225 ORTHO05D006830 2.0e-35 152.9 243 39.9
Glyma.02G120400 Glycine max HOM05D005225 ORTHO05D006830 2.0e-35 152.9 242 40.1
MSTRG.7736 Avicennia marina HOM05D005225 ORTHO05D006830 2.6e-35 152.5 247 37.2
FAN12G2267 Fragaria x ananassa HOM05D005225 ORTHO05D006830 3.5e-35 152.1 243 39.9
arahy.Tifrunner.gnm1.ann1.BAL663 Arachis hypogaea HOM05D005225 ORTHO05D006830 4.5e-35 151.8 243 38.7
Gorai.008G176100 Gossypium raimondii HOM05D005225 ORTHO05D006830 4.5e-35 151.8 237 40.9
Lalb_Chr04g0255551 Lupinus albus HOM05D005225 ORTHO05D006830 4.5e-35 151.8 237 39.7
arahy.Tifrunner.gnm1.ann1.BYWX90 Arachis hypogaea HOM05D005225 ORTHO05D006830 5.9e-35 151.4 243 38.7
arahy.Tifrunner.gnm1.ann1.W47LMS Arachis hypogaea HOM05D005225 ORTHO05D006830 5.9e-35 151.4 243 38.7
Glyma.01G062200 Glycine max HOM05D005225 ORTHO05D006830 5.9e-35 151.4 242 40.1
MBI16_g03095_MAGBIO Magnolia biondii HOM05D005225 ORTHO05D006830 7.7e-35 151.0 237 40.9
RcHm_v2.0_Chr7g0212391 Rosa chinensis HOM05D005225 ORTHO05D006830 1.0e-34 150.6 237 40.5
GSVIVG01012238001 Vitis vinifera HOM05D005225 ORTHO05D006830 1.7e-34 149.8 237 39.2
Eucgr.F03034 Eucalyptus grandis HOM05D005225 ORTHO05D006830 2.2e-34 149.4 237 40.5
FAN07G1983 Fragaria x ananassa HOM05D005225 ORTHO05D006830 2.2e-34 149.4 237 39.2
PSO017G1582 Papaver somniferum HOM05D005225 ORTHO05D006830 2.2e-34 149.4 232 41.4
Hund25165 Selenicereus undatus HOM05D005225 ORTHO05D006830 2.9e-34 149.1 237 39.2
Cfa008863 Carpinus fangiana HOM05D005225 ORTHO05D006830 3.8e-34 148.7 242 40.9
Ciclev10031260m.g Citrus clementina HOM05D005225 ORTHO05D006830 3.8e-34 148.7 237 38.8
RcHm_v2.0_Chr2g0139541 Rosa chinensis HOM05D005225 ORTHO05D006830 3.8e-34 148.7 237 40.1
TWI75G0045 Tripterygium wilfordii HOM05D005225 ORTHO05D006830 3.8e-34 148.7 242 38.4
COL.COLO4_27858 Corchorus olitorius HOM05D005225 ORTHO05D006830 5.0e-34 148.3 237 38.8
Medtr5g044980 Medicago truncatula HOM05D005225 ORTHO05D006830 6.5e-34 147.9 237 38.8
Oeu055095.2 Olea europaea HOM05D005225 ORTHO05D006830 6.5e-34 147.9 242 39.7
QL03p073750 Quercus lobata HOM05D005225 ORTHO05D006830 6.5e-34 147.9 232 40.9
CiPaw.06G093200 Carya illinoinensis HOM05D005225 ORTHO05D006830 8.5e-34 147.5 237 39.7
Potri.008G097400 Populus trichocarpa HOM05D005225 ORTHO05D006830 8.5e-34 147.5 237 39.2
Sabra08G0073600 Salix brachista HOM05D005225 ORTHO05D006830 8.5e-34 147.5 237 38.8
Haze_11886 Corylus avellana HOM05D005225 ORTHO05D006830 1.1e-33 147.1 242 40.9
Lalb_Chr10g0098931 Lupinus albus HOM05D005225 ORTHO05D006830 1.1e-33 147.1 215 43.3
vmacro01311 Vaccinium macrocarpon HOM05D005225 ORTHO05D006830 1.1e-33 147.1 237 39.7
arahy.Tifrunner.gnm1.ann1.1IY8V2 Arachis hypogaea HOM05D005225 ORTHO05D006830 1.5e-33 146.7 243 37.9
Rhsim09G0126000 Rhododendron simsii HOM05D005225 ORTHO05D006830 1.5e-33 146.7 243 38.7
TWI79G0826 Tripterygium wilfordii HOM05D005225 ORTHO05D006830 1.9e-33 146.4 242 37.2
CANSAT80G1664 Cannabis sativa HOM05D005225 ORTHO05D006830 2.5e-33 146.0 237 39.2
MELO3C020077.2 Cucumis melo HOM05D005225 ORTHO05D006830 2.5e-33 146.0 243 37.9
THA.LOC104821999 Tarenaya hassleriana HOM05D005225 ORTHO05D006830 3.2e-33 145.6 242 40.1
Ah.03g138790 Amaranthus hybridus HOM05D005225 ORTHO05D006830 4.2e-33 145.2 237 38.4
DCAR_004043 Daucus carota HOM05D005225 ORTHO05D006830 4.2e-33 145.2 242 40.5
Phvul.007G262101 Phaseolus vulgaris HOM05D005225 ORTHO05D006830 4.2e-33 145.2 237 40.1
Sed0018680 Sechium edule HOM05D005225 ORTHO05D006830 4.2e-33 145.2 232 38.8
ClCG11G000950 Citrullus lanatus HOM05D005225 ORTHO05D006830 5.5e-33 144.8 242 38.0
Sopen05g006880 Solanum pennellii HOM05D005225 ORTHO05D006830 5.5e-33 144.8 232 39.7
Gohir.D12G163500 Gossypium hirsutum HOM05D005225 ORTHO05D006830 7.2e-33 144.4 233 39.9
Prupe.1G566200 Prunus persica HOM05D005225 ORTHO05D006830 7.2e-33 144.4 237 39.2
SalBow2G3373 Salvia bowleyana HOM05D005225 ORTHO05D006830 7.2e-33 144.4 232 38.4
Atru.chr11.1603 Acer truncatum HOM05D005225 ORTHO05D006830 9.4e-33 144.1 237 38.0
Lj3P1029T28 Lonicera japonica HOM05D005225 ORTHO05D006830 9.4e-33 144.1 242 40.1
Phvul.001G131450 Phaseolus vulgaris HOM05D005225 ORTHO05D006830 9.4e-33 144.1 232 40.5
PGR102G0586 Punica granatum HOM05D005225 ORTHO05D006830 9.4e-33 144.1 243 39.1
QL02p092646 Quercus lobata HOM05D005225 ORTHO05D006830 9.4e-33 144.1 232 40.5
HPP92_017786 Vanilla planifolia HOM05D005225 ORTHO05D006830 1.2e-32 143.7 248 36.7
Gohir.A12G160100 Gossypium hirsutum HOM05D005225 ORTHO05D006830 1.6e-32 143.3 233 39.1
Cc11_g11810 Coffea canephora HOM05D005225 ORTHO05D006830 2.1e-32 142.9 237 38.0
Hma1.2p1_0051F.1_g029440 Hydrangea macrophylla HOM05D005225 ORTHO05D006830 2.1e-32 142.9 242 40.1
MD16G1281400 Malus domestica HOM05D005225 ORTHO05D006830 2.1e-32 142.9 237 39.2
BraA01t00759Z Brassica rapa HOM05D005225 ORTHO05D006830 4.7e-32 141.7 237 37.1
AUR62003082 Chenopodium quinoa HOM05D005225 ORTHO05D006830 6.1e-32 141.4 237 37.1
HanXRQChr12g0375111 Helianthus annuus HOM05D005225 ORTHO05D006830 6.1e-32 141.4 237 37.1
HanXRQChr03g0092011 Helianthus annuus HOM05D005225 ORTHO05D006830 8.0e-32 141.0 237 37.6
Nitab4.5_0007734g0040 Nicotiana tabacum HOM05D005225 ORTHO05D006830 8.0e-32 141.0 242 38.4
A01p08120 Brassica napus HOM05D005225 ORTHO05D006830 1.0e-31 140.6 237 36.7
ECA246G3793 Erigeron canadensis HOM05D005225 ORTHO05D006830 1.0e-31 140.6 237 39.7
Nn8g41224 Nelumbo nucifera HOM05D005225 ORTHO05D006830 1.0e-31 140.6 216 41.7
CsaV3_5G008630 Cucumis sativus L. HOM05D005225 ORTHO05D006830 1.4e-31 140.2 243 36.2
Lsat_1_v5_gn_3_53701 Lactuca sativa HOM05D005225 ORTHO05D006830 1.4e-31 140.2 237 39.2
VMungo1215G0332 Vigna mungo HOM05D005225 ORTHO05D006830 1.4e-31 140.2 237 39.7
CARHR237920 Cardamine hirsuta HOM05D005225 ORTHO05D006830 1.8e-31 139.8 237 37.6
PGSC0003DMG400028362 Solanum tuberosum HOM05D005225 ORTHO05D006830 1.8e-31 139.8 232 38.8
AUR62007898 Chenopodium quinoa HOM05D005225 ORTHO05D006830 2.3e-31 139.4 237 36.7
Sp7g27800 Schrenkiella parvula HOM05D005225 ORTHO05D006830 2.3e-31 139.4 237 36.7
Peaxi162Scf00175g00052 Petunia axillaris HOM05D005225 ORTHO05D006830 4.0e-31 138.7 232 39.2
Carub.0007s1065 Capsella rubella HOM05D005225 ORTHO05D006830 5.2e-31 138.3 237 36.7
CAN.G707.21 Capsicum annuum HOM05D005225 ORTHO05D006830 5.2e-31 138.3 232 39.2
Nitab4.5_0000231g0060 Nicotiana tabacum HOM05D005225 ORTHO05D006830 8.8e-31 137.5 232 38.4
BcaC09g51778 Brassica carinata HOM05D005225 ORTHO05D006830 1.2e-30 137.1 237 36.3
C01p09090 Brassica napus HOM05D005225 ORTHO05D006830 1.2e-30 137.1 237 36.3
BolC1t00900H Brassica oleracea HOM05D005225 ORTHO05D006830 1.2e-30 137.1 237 36.3
AT4G30000 Arabidopsis thaliana HOM05D005225 ORTHO05D006830 1.5e-30 136.7 237 36.7
MD06G1024100 Malus domestica HOM05D005225 ORTHO05D006830 2.0e-30 136.3 193 44.0
Sp5g24250 Schrenkiella parvula HOM05D005225 ORTHO05D006830 2.0e-30 136.3 242 37.2
Thhalv10024845m.g Eutrema salsugineum HOM05D005225 ORTHO05D006830 3.3e-30 135.6 237 36.7
Thhalv10019460m.g Eutrema salsugineum HOM05D005225 ORTHO05D006830 1.3e-29 133.7 242 36.4
AT1G69190 Arabidopsis thaliana HOM05D005225 ORTHO05D006830 1.7e-29 133.3 242 37.6
AL2G28280 Arabidopsis lyrata HOM05D005225 ORTHO05D006830 2.2e-29 132.9 242 37.6
AL7G22240 Arabidopsis lyrata HOM05D005225 ORTHO05D006830 2.2e-29 132.9 237 35.9
Migut.L01174 Erythranthe guttata HOM05D005225 ORTHO05D006830 2.8e-29 132.5 242 35.5
Aa31LG2G20560 Aethionema arabicum HOM05D005225 ORTHO05D006830 3.7e-29 132.1 237 35.0
SGA_v2.0_scaffold45G17115 Striga asiatica HOM05D001733 ORTHO05D001882 3.1e-28 129.0 197 38.1
SHI01330 Sapria himalayana HOM05D005225 ORTHO05D006830 7.0e-28 127.9 242 36.8
unitig_22.g6894 Utricularia gibba HOM05D005225 ORTHO05D006830 7.0e-28 127.9 237 34.6
Zm00001eb319990 Zea mays HOM05D005225 ORTHO05D006830 7.0e-28 127.9 243 34.2
Sc04g0007480 Simmondsia chinensis HOM05D005225 ORTHO05D006830 2.0e-27 126.3 242 36.4
ATR0827G107 Amborella trichopoda HOM05D005225 ORTHO05D006830 3.5e-27 125.6 237 33.8
Os07g0618500 Oryza sativa ssp. japonica HOM05D005225 ORTHO05D006830 4.5e-27 125.2 230 34.8
SEGI_35565 Sequoiadendron giganteum HOM05D005225 ORTHO05D006830 1.0e-26 124.0 244 34.4
EL10Ac6g15018 Beta vulgaris HOM05D005225 ORTHO05D006830 2.9e-26 122.5 223 36.3
SGA_v2.0_scaffold85G26791 Striga asiatica HOM05D005225 ORTHO05D006830 2.5e-25 119.4 232 32.8
Aa31sc367G20 Aethionema arabicum HOM05D005225 ORTHO05D006830 5.5e-25 118.2 238 34.5
SEGI_04122 Sequoiadendron giganteum HOM05D005225 ORTHO05D006830 2.1e-24 116.3 244 32.8
Actinidia16153 Actinidia chinensis HOM05D005225 ORTHO05D006830 3.6e-24 115.5 137 49.6
Nn4g23481 Nelumbo nucifera HOM05D005225 ORTHO05D006830 1.5e-22 110.2 79 68.4
Solyc05g012090.4 Solanum lycopersicum HOM05D005225 ORTHO05D006830 8.3e-21 104.4 79 64.6
AagrBONN_evm.TU.Sc2ySwM_362.716 Anthoceros agrestis HOM05D005225 ORTHO05D006830 6.5e-18 94.7 229 28.8
Pp3c27_4310 Physcomitrium patens HOM05D005225 ORTHO05D006830 1.2e-16 90.5 230 32.2
Mapoly0021s0079 Marchantia polymorpha HOM05D005225 ORTHO05D006830 2.8e-16 89.4 73 58.9
CBR_g61480 Chara braunii HOM05D005225 ORTHO05D006830 1.2e-14 84.0 82 47.6
SMO358G0268 Selaginella moellendorffii HOM05D005225 ORTHO05D006830 2.8e-13 79.3 84 50.0
Cre10.g428550 Chlamydomonas reinhardtii HOM05D005225 ORTHO05D006830 1.8e-12 76.6 73 46.6
CARHR062340 Cardamine hirsuta HOM05D005225 ORTHO05D006830 3.1e-12 75.9 63 60.3
SGA_v2.0_scaffold16G07808 Striga asiatica HOM05D005225 ORTHO05D006830 5.4e-12 75.1 61 54.1
PRCOL_00003253 Prasinoderma coloniale HOM05D005225 ORTHO05D006830 2.3e-10 69.7 87 41.4
MCO11G893 Micromonas commoda HOM05D005225 ORTHO05D006830 5.0e-10 68.6 85 48.2
HanXRQChr04g0120931 Helianthus annuus HOM05D005225 ORTHO05D006830 1.5e-09 67.0 56 53.6
QL06p011620 Quercus lobata HOM05D005225 ORTHO05D006830 1.6e-08 63.5 39 79.5
CDE04G0587 Ceratophyllum demersum HOM05D005225 ORTHO05D006830 2.1e-08 63.2 47 61.7
Cfa024768 Carpinus fangiana HOM05D005225 ORTHO05D124687 1.8e-07 60.1 80 41.2


User provided reference genes

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