Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0718 Trochodendron aralioides HOM05D009487 ORTHO05D011434 7.2e-228 793.5 382 100.0
Nn1g09219 Nelumbo nucifera HOM05D009487 ORTHO05D011434 1.5e-47 194.5 390 34.9
DCAR_025206 Daucus carota HOM05D009487 ORTHO05D011434 2.7e-41 173.7 366 34.4
Hma1.2p1_0071F.1_g037920 Hydrangea macrophylla HOM05D009487 ORTHO05D011434 2.3e-40 170.6 355 34.6
Rhsim13G0006900 Rhododendron simsii HOM05D009487 ORTHO05D011434 2.5e-39 167.2 356 32.9
Hma1.2p1_0071F.1_g037940 Hydrangea macrophylla HOM05D009487 ORTHO05D011434 9.6e-39 165.2 385 31.4
RhsimUnG0032700 Rhododendron simsii HOM05D009487 ORTHO05D011434 4.6e-33 146.4 387 30.5
Aqoxy4G00872 Aquilegia oxysepala HOM05D026504 ORTHO05D011434 6.0e-33 146.0 395 30.6
DCAR_025207 Daucus carota HOM05D009487 ORTHO05D011434 1.3e-32 144.8 358 31.6
Aqoxy2G04013 Aquilegia oxysepala HOM05D026504 ORTHO05D011434 6.7e-32 142.5 382 31.9
Aqoxy2G04015 Aquilegia oxysepala HOM05D026504 ORTHO05D011434 5.6e-31 139.4 385 32.2
DCAR_005359 Daucus carota HOM05D009487 ORTHO05D011434 9.6e-31 138.7 367 30.8
RhsimUnG0032600 Rhododendron simsii HOM05D009487 ORTHO05D011434 2.1e-30 137.5 381 30.4
RhsimUnG0144600 Rhododendron simsii HOM05D009487 ORTHO05D011434 1.5e-28 131.3 334 29.6
RhsimUnG0032500 Rhododendron simsii HOM05D009487 ORTHO05D011434 2.6e-28 130.6 339 29.5
Nn2g13898 Nelumbo nucifera HOM05D009487 ORTHO05D011434 5.8e-28 129.4 404 29.2
RhsimUnG0188900 Rhododendron simsii HOM05D009487 ORTHO05D011434 5.8e-28 129.4 346 30.3
Rhsim05G0023100 Rhododendron simsii HOM05D009487 ORTHO05D011434 2.2e-27 127.5 328 30.2
RhsimUnG0144900 Rhododendron simsii HOM05D009487 ORTHO05D011434 2.2e-27 127.5 346 30.3
CSS0036745 Camellia sinensis var. sinensis HOM05D009487 ORTHO05D011434 3.8e-27 126.7 329 29.5
DCAR_025205 Daucus carota HOM05D000041 ORTHO05D008933 6.5e-27 125.9 365 29.9
Rhsim05G0023000 Rhododendron simsii HOM05D009487 ORTHO05D011434 6.5e-27 125.9 327 30.3
RhsimUnG0144700 Rhododendron simsii HOM05D009487 ORTHO05D011434 1.8e-24 117.9 379 28.0
Rhsim07G0047500 Rhododendron simsii HOM05D009487 ORTHO05D011434 3.9e-24 116.7 330 30.0
Lj9C465T16 Lonicera japonica HOM05D009487 ORTHO05D011434 2.1e-22 110.9 313 31.3
Rhsim05G0023300 Rhododendron simsii HOM05D009487 ORTHO05D011434 2.5e-15 87.4 108 41.7
Dinv05292 Davidia involucrata HOM05D003536 ORTHO05D004233 3.3e-15 87.0 337 25.8
TAR374G1264 Trochodendron aralioides HOM05D001286 ORTHO05D000440 3.7e-14 83.6 310 25.2
Rhsim05G0150400 Rhododendron simsii HOM05D009487 ORTHO05D011434 8.2e-14 82.4 279 25.8
MBI19_g10180_MAGBIO Magnolia biondii HOM05D001286 ORTHO05D000440 2.4e-13 80.9 326 25.2
DCAR_025209 Daucus carota HOM05D009487 ORTHO05D011434 4.1e-13 80.1 100 41.0
ECA236G4173 Erigeron canadensis HOM05D001286 ORTHO05D000440 6.9e-13 79.3 298 26.8
Lj2g0018976 Lotus japonicus HOM05D008995 ORTHO05D000074 2.6e-12 77.4 347 23.3
FAN24G0183 Fragaria x ananassa HOM05D007879 ORTHO05D000440 3.4e-12 77.0 238 27.7
FvH4_2g24700 Fragaria vesca HOM05D007879 ORTHO05D000440 1.0e-11 75.5 236 27.5
QL02p017356 Quercus lobata HOM05D000151 ORTHO05D000074 1.0e-11 75.5 337 23.7
FAN15G1295 Fragaria x ananassa HOM05D007879 ORTHO05D000440 1.3e-11 75.1 205 29.3
Nn1g05876 Nelumbo nucifera HOM05D001286 ORTHO05D000440 1.7e-11 74.7 315 29.2
Peaxi162Scf00404g00218 Petunia axillaris HOM05D001286 ORTHO05D000440 2.2e-11 74.3 176 31.8
Thecc.05G090300 Theobroma cacao HOM05D001286 ORTHO05D000440 2.2e-11 74.3 155 31.0
BcaB01g01734 Brassica carinata HOM05D001286 ORTHO05D000440 3.8e-11 73.6 332 25.6
Glyma.13G154400 Glycine max HOM05D001286 ORTHO05D000440 5.0e-11 73.2 212 26.9
COL.COLO4_29718 Corchorus olitorius HOM05D001286 ORTHO05D000440 6.5e-11 72.8 208 26.4
FAN20G2795 Fragaria x ananassa HOM05D007879 ORTHO05D000440 8.5e-11 72.4 155 33.5
Nitab4.5_0000692g0040 Nicotiana tabacum HOM05D001286 ORTHO05D000440 8.5e-11 72.4 176 31.2
Glyma.10G073700 Glycine max HOM05D001286 ORTHO05D000440 1.1e-10 72.0 212 26.9
Duzib093G1514 Durio zibethinus HOM05D001286 ORTHO05D000440 1.9e-10 71.2 155 30.3
Cfa016618 Carpinus fangiana HOM05D001286 ORTHO05D000440 2.5e-10 70.9 143 32.9
DCAR_020742 Daucus carota HOM05D001286 ORTHO05D000440 2.5e-10 70.9 153 29.4
TAR636G3329 Trochodendron aralioides HOM05D001286 ORTHO05D000440 2.5e-10 70.9 141 31.2
Aqoxy2G00209 Aquilegia oxysepala HOM05D009487 ORTHO05D011434 3.2e-10 70.5 155 29.7
RcHm_v2.0_Chr3g0473881 Rosa chinensis HOM05D001286 ORTHO05D000440 3.2e-10 70.5 212 24.1
Sc20g0006330 Simmondsia chinensis HOM05D001286 ORTHO05D000440 3.2e-10 70.5 175 29.7
Hma1.2p1_0311F.1_g121210 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 4.2e-10 70.1 122 38.5
Sp5g06085 Schrenkiella parvula HOM05D001286 ORTHO05D000440 4.2e-10 70.1 134 29.9
unitig_744.g24700 Utricularia gibba HOM05D001286 ORTHO05D000440 4.2e-10 70.1 175 28.0
Gohir.D01G195200 Gossypium hirsutum HOM05D001286 ORTHO05D000440 5.5e-10 69.7 198 25.3
Gorai.002G239400 Gossypium raimondii HOM05D001286 ORTHO05D000440 5.5e-10 69.7 198 25.3
Rhsim08G0204600 Rhododendron simsii HOM05D001286 ORTHO05D000440 7.2e-10 69.3 284 27.1
Hund03994 Selenicereus undatus HOM05D001286 ORTHO05D000440 7.2e-10 69.3 196 26.0
Duzib106G1385 Durio zibethinus HOM05D001286 ORTHO05D000440 9.4e-10 68.9 143 32.2
Lsat_1_v5_gn_8_77420 Lactuca sativa HOM05D001286 ORTHO05D000440 9.4e-10 68.9 127 34.6
Lj5g0005331 Lotus japonicus HOM05D001286 ORTHO05D000440 9.4e-10 68.9 194 26.3
MSTRG.26636 Avicennia marina HOM05D001286 ORTHO05D000440 1.2e-09 68.6 183 31.1
CSS0048691 Camellia sinensis var. sinensis HOM05D001286 ORTHO05D000440 1.2e-09 68.6 213 26.3
Phvul.001G190800 Phaseolus vulgaris HOM05D001286 ORTHO05D000440 1.2e-09 68.6 191 26.2
Solyc09g009880.3 Solanum lycopersicum HOM05D001286 ORTHO05D000440 1.2e-09 68.6 176 30.1
VMungo1383G3108 Vigna mungo HOM05D001286 ORTHO05D000440 1.2e-09 68.6 191 26.2
CANSAT64G2057 Cannabis sativa HOM05D001286 ORTHO05D000440 1.6e-09 68.2 142 29.6
Ciclev10021313m.g Citrus clementina HOM05D007879 ORTHO05D000440 1.6e-09 68.2 187 30.5
Migut.J01025 Erythranthe guttata HOM05D001286 ORTHO05D000440 1.6e-09 68.2 175 28.0
Prupe.7G109000 Prunus persica HOM05D001286 ORTHO05D000440 1.6e-09 68.2 143 32.9
TWI12G0155 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.6e-09 68.2 120 33.3
CiPaw.10G010500 Carya illinoinensis HOM05D001286 ORTHO05D000440 2.1e-09 67.8 143 32.2
Haze_19623 Corylus avellana HOM05D001286 ORTHO05D000440 2.1e-09 67.8 143 32.2
Gohir.A01G205800 Gossypium hirsutum HOM05D001286 ORTHO05D000440 2.1e-09 67.8 198 24.7
PGSC0003DMG400008951 Solanum tuberosum HOM05D001286 ORTHO05D000440 2.1e-09 67.8 176 30.7
TAR636G3684 Trochodendron aralioides HOM05D001286 ORTHO05D000440 2.1e-09 67.8 143 32.2
Atru.chr8.1486 Acer truncatum HOM05D001286 ORTHO05D000440 2.7e-09 67.4 158 27.8
Actinidia01831 Actinidia chinensis HOM05D000151 ORTHO05D000074 2.7e-09 67.4 308 24.7
arahy.Tifrunner.gnm1.ann1.2MM3YT Arachis hypogaea HOM05D001286 ORTHO05D000440 2.7e-09 67.4 212 24.5
arahy.Tifrunner.gnm1.ann1.4DR6J6 Arachis hypogaea HOM05D001286 ORTHO05D000440 2.7e-09 67.4 212 24.5
CAN.G397.56 Capsicum annuum HOM05D001286 ORTHO05D000440 2.7e-09 67.4 121 33.9
CARHR036030 Cardamine hirsuta HOM05D001286 ORTHO05D000440 2.7e-09 67.4 176 26.7
Dinv31694 Davidia involucrata HOM05D001286 ORTHO05D000440 2.7e-09 67.4 195 27.7
Manes.05G141800 Manihot esculenta HOM05D000151 ORTHO05D000074 2.7e-09 67.4 142 32.4
FAN27G2132 Fragaria x ananassa HOM05D007879 ORTHO05D000440 3.6e-09 67.0 155 31.6
QL07p038675 Quercus lobata HOM05D001286 ORTHO05D000440 4.6e-09 66.6 155 31.6
Rhsim13G0015000 Rhododendron simsii HOM05D009487 ORTHO05D011434 4.6e-09 66.6 167 32.3
Sopen09g004630 Solanum pennellii HOM05D001286 ORTHO05D000440 4.6e-09 66.6 176 30.1
Ah.08g210520 Amaranthus hybridus HOM05D001286 ORTHO05D000440 6.1e-09 66.2 141 30.5
Cfa014025 Carpinus fangiana HOM05D000151 ORTHO05D000074 6.1e-09 66.2 322 22.4
Ciclev10011976m.g Citrus clementina HOM05D001286 ORTHO05D000440 6.1e-09 66.2 143 28.7
Haze_09881 Corylus avellana HOM05D001286 ORTHO05D000440 6.1e-09 66.2 140 35.7
Glyma.09G116200 Glycine max HOM05D008995 ORTHO05D000074 6.1e-09 66.2 329 24.6
Manes.08G026100 Manihot esculenta HOM05D001286 ORTHO05D000440 6.1e-09 66.2 143 31.5
Oeu047860.1 Olea europaea HOM05D001286 ORTHO05D000440 6.1e-09 66.2 121 34.7
Potri.016G079300 Populus trichocarpa HOM05D001286 ORTHO05D000440 7.9e-09 65.9 154 28.6
QL93p0100_0562 Quercus lobata HOM05D001286 ORTHO05D000440 7.9e-09 65.9 209 27.3
Sabra06G0163600 Salix brachista HOM05D001286 ORTHO05D000440 7.9e-09 65.9 161 28.0
Sabra16G0085000 Salix brachista HOM05D001286 ORTHO05D000440 7.9e-09 65.9 142 29.6
SGA_v2.0_scaffold31G12907 Striga asiatica HOM05D001286 ORTHO05D000440 7.9e-09 65.9 128 32.0
Cc06_g05910 Coffea canephora HOM05D001286 ORTHO05D000440 1.0e-08 65.5 121 35.5
Cfa007811 Carpinus fangiana HOM05D001286 ORTHO05D000440 1.8e-08 64.7 344 23.5
Cfa021905 Carpinus fangiana HOM05D001286 ORTHO05D000440 1.8e-08 64.7 139 31.7
Ca_00899_v3 Cicer arietinum L. HOM05D001286 ORTHO05D000440 1.8e-08 64.7 145 29.0
TPR.G9893 Trifolium pratense HOM05D001286 ORTHO05D000440 1.8e-08 64.7 145 29.7
SalBow3G0903 Salvia bowleyana HOM05D001286 ORTHO05D000440 2.3e-08 64.3 123 31.7
Medtr1g059840 Medicago truncatula HOM05D001286 ORTHO05D000440 3.0e-08 63.9 145 28.3
Potri.006G212600 Populus trichocarpa HOM05D001286 ORTHO05D000440 3.0e-08 63.9 154 27.9
MSTRG.19268 Avicennia marina HOM05D001286 ORTHO05D000440 3.9e-08 63.5 175 28.6
MD14G1023800 Malus domestica HOM05D001286 ORTHO05D000440 3.9e-08 63.5 143 30.1
Sabra16G0087200 Salix brachista HOM05D001286 ORTHO05D000440 3.9e-08 63.5 142 28.9
TPR.G23337 Trifolium pratense HOM05D001286 ORTHO05D000440 3.9e-08 63.5 204 27.0
FAN02G2895 Fragaria x ananassa HOM05D001286 ORTHO05D000440 6.7e-08 62.8 142 27.5
Psat3g032400 Pisum sativum HOM05D001286 ORTHO05D000440 6.7e-08 62.8 185 25.9
Haze_14264 Corylus avellana HOM05D001286 ORTHO05D000440 8.8e-08 62.4 212 26.4
QL02p058170 Quercus lobata HOM05D001286 ORTHO05D000440 8.8e-08 62.4 209 27.3
SalBow5G2315 Salvia bowleyana HOM05D001286 ORTHO05D000440 8.8e-08 62.4 178 25.8
Cc06_g19480 Coffea canephora HOM05D000151 ORTHO05D000074 1.1e-07 62.0 147 29.9
FvH4_3g27200 Fragaria vesca HOM05D008995 ORTHO05D000074 1.1e-07 62.0 371 22.6
Hma1.2p1_0311F.1_g121220 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 1.1e-07 62.0 122 37.7
Dinv20250 Davidia involucrata HOM05D000151 ORTHO05D000074 1.5e-07 61.6 374 24.1
MD13G1035900 Malus domestica HOM05D008995 ORTHO05D000074 1.5e-07 61.6 368 22.8
QL12p023875 Quercus lobata HOM05D007879 ORTHO05D000440 2.0e-07 61.2 175 29.7
TPR.G23322 Trifolium pratense HOM05D001286 ORTHO05D000440 2.0e-07 61.2 210 25.2
TAR636G2462 Trochodendron aralioides HOM05D001286 ORTHO05D000440 2.0e-07 61.2 140 31.4
Cfa007810 Carpinus fangiana HOM05D001286 ORTHO05D000440 2.5e-07 60.8 205 28.8
FvH4_6g18890 Fragaria vesca HOM05D001286 ORTHO05D000440 2.5e-07 60.8 142 27.5
FAN14G2386 Fragaria x ananassa HOM05D001286 ORTHO05D000440 2.5e-07 60.8 142 27.5
EL10Ac7g16907 Beta vulgaris HOM05D001286 ORTHO05D000440 3.3e-07 60.5 151 27.2
COL.COLO4_29554 Corchorus olitorius HOM05D008995 ORTHO05D000074 3.3e-07 60.5 204 28.4
Dinv20253 Davidia involucrata HOM05D000151 ORTHO05D000074 3.3e-07 60.5 191 28.3
Thhalv10006319m.g Eutrema salsugineum HOM05D001286 ORTHO05D000440 3.3e-07 60.5 93 34.4
QL04p042652 Quercus lobata HOM05D001286 ORTHO05D000440 3.3e-07 60.5 179 29.1
QL04p042669 Quercus lobata HOM05D001286 ORTHO05D000440 3.3e-07 60.5 179 29.1
QL04p042854 Quercus lobata HOM05D001286 ORTHO05D000440 3.3e-07 60.5 179 29.1
CSS0034097 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 4.3e-07 60.1 142 25.4
Dinv32989 Davidia involucrata HOM05D007879 ORTHO05D000440 4.3e-07 60.1 203 27.1
AL5G37800 Arabidopsis lyrata HOM05D001286 ORTHO05D000440 5.7e-07 59.7 121 31.4
BcaB05g23813 Brassica carinata HOM05D001286 ORTHO05D000440 5.7e-07 59.7 302 22.2
Lj6g0010361 Lotus japonicus HOM05D007879 ORTHO05D000440 5.7e-07 59.7 212 26.4
Aqoxy7G02804 Aquilegia oxysepala HOM05D008995 ORTHO05D000074 7.4e-07 59.3 352 25.3
AUR62037031 Chenopodium quinoa HOM05D001286 ORTHO05D000440 7.4e-07 59.3 196 26.5
COL.COLO4_14733 Corchorus olitorius HOM05D001286 ORTHO05D000440 7.4e-07 59.3 189 27.0
Nn7g38181 Nelumbo nucifera HOM05D001286 ORTHO05D000440 7.4e-07 59.3 151 32.5
Atru.chr2.424 Acer truncatum HOM05D001286 ORTHO05D000440 9.7e-07 58.9 222 24.8
FAN11G1982 Fragaria x ananassa HOM05D008995 ORTHO05D000074 9.7e-07 58.9 371 22.1
Lj2P471T10 Lonicera japonica HOM05D000151 ORTHO05D000074 9.7e-07 58.9 143 28.0
Lj3C74T1 Lonicera japonica HOM05D000151 ORTHO05D000074 1.3e-06 58.5 167 25.7
SalBow5G5642 Salvia bowleyana HOM05D001286 ORTHO05D000440 1.3e-06 58.5 121 29.8
Sopen08g030770 Solanum pennellii HOM05D000151 ORTHO05D000074 1.3e-06 58.5 340 26.2
AUR62006191 Chenopodium quinoa HOM05D001286 ORTHO05D000440 1.7e-06 58.2 141 27.0
Solyc08g082510.1 Solanum lycopersicum HOM05D000151 ORTHO05D000074 1.7e-06 58.2 392 25.5
TAR374G0175 Trochodendron aralioides HOM05D001286 ORTHO05D000440 1.7e-06 58.2 133 30.1
FAN05G3626 Fragaria x ananassa HOM05D001286 ORTHO05D000440 2.2e-06 57.8 142 26.1
RcHm_v2.0_Chr4g0434481 Rosa chinensis HOM05D008995 ORTHO05D000074 2.2e-06 57.8 322 22.0
TAR376G0134 Trochodendron aralioides HOM05D001286 ORTHO05D000440 2.2e-06 57.8 299 24.1
BraA03t12137Z Brassica rapa HOM05D001286 ORTHO05D000440 2.8e-06 57.4 179 25.7
AT3G56470 Arabidopsis thaliana HOM05D001286 ORTHO05D000440 3.7e-06 57.0 121 30.6
Haze_04806 Corylus avellana HOM05D007879 ORTHO05D000440 3.7e-06 57.0 197 27.9
Lj2C471T6 Lonicera japonica HOM05D000151 ORTHO05D000074 3.7e-06 57.0 159 32.1
QL08p010398 Quercus lobata HOM05D003035 ORTHO05D000440 3.7e-06 57.0 285 25.3
Potri.002G015700 Populus trichocarpa HOM05D000151 ORTHO05D000074 4.8e-06 56.6 136 32.4
Haze_19622 Corylus avellana HOM05D001286 ORTHO05D000440 6.3e-06 56.2 146 31.5
C03p35590 Brassica napus HOM05D001286 ORTHO05D000440 8.2e-06 55.8 179 26.3
BolC3t15873H Brassica oleracea HOM05D001286 ORTHO05D000440 8.2e-06 55.8 179 26.3
Prupe.8G252000 Prunus persica HOM05D007879 ORTHO05D000440 8.2e-06 55.8 131 32.8
RhsimUnG0188800 Rhododendron simsii HOM05D009487 ORTHO05D011434 8.2e-06 55.8 279 24.0


User provided reference genes

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