Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0712 Trochodendron aralioides HOM05D006796 ORTHO05D008615 5.3e-151 537.7 287 100.0
TAR629G0550 Trochodendron aralioides HOM05D006796 ORTHO05D008615 1.0e-125 453.8 287 81.9
Nn4g23271 Nelumbo nucifera HOM05D006796 ORTHO05D008615 9.8e-121 437.2 287 80.1
Dinv34092 Davidia involucrata HOM05D006796 ORTHO05D008615 6.0e-110 401.4 314 71.3
GSVIVG01012496001 Vitis vinifera HOM05D006796 ORTHO05D008615 3.6e-107 392.1 296 72.6
FvH4_4g30770 Fragaria vesca HOM05D006796 ORTHO05D008615 2.6e-105 386.0 287 76.3
FAN22G2031 Fragaria x ananassa HOM05D006796 ORTHO05D008615 2.6e-105 386.0 287 76.3
Atru.chr11.1722 Acer truncatum HOM05D006796 ORTHO05D008615 4.4e-105 385.2 289 71.6
Thecc.02G339900 Theobroma cacao HOM05D006796 ORTHO05D008615 1.3e-104 383.6 288 72.6
Haze_11961 Corylus avellana HOM05D006796 ORTHO05D008615 2.2e-104 382.9 308 68.2
CSS0026382 Camellia sinensis var. sinensis HOM05D006796 ORTHO05D008615 4.9e-104 381.7 295 68.8
FAN12G1163 Fragaria x ananassa HOM05D006796 ORTHO05D008615 4.9e-104 381.7 287 75.6
CiPaw.07G071700 Carya illinoinensis HOM05D006796 ORTHO05D008615 3.2e-103 379.0 297 69.7
Manes.05G105900 Manihot esculenta HOM05D006796 ORTHO05D008615 5.4e-103 378.3 292 69.5
Potri.010G164400 Populus trichocarpa HOM05D006796 ORTHO05D008615 7.1e-103 377.9 295 72.2
Actinidia19934 Actinidia chinensis HOM05D006796 ORTHO05D008615 1.2e-102 377.1 287 70.0
FAN07G2185 Fragaria x ananassa HOM05D006796 ORTHO05D008615 1.6e-102 376.7 289 70.9
arahy.Tifrunner.gnm1.ann1.R8NX8D Arachis hypogaea HOM05D006796 ORTHO05D008615 7.8e-102 374.4 294 66.7
RcHm_v2.0_Chr4g0439161 Rosa chinensis HOM05D006796 ORTHO05D008615 7.8e-102 374.4 287 74.6
arahy.Tifrunner.gnm1.ann1.NP20FV Arachis hypogaea HOM05D006796 ORTHO05D008615 1.0e-101 374.0 294 66.7
Ciclev10032381m.g Citrus clementina HOM05D006796 ORTHO05D008615 2.3e-101 372.9 289 72.3
Sabra10G0124800 Salix brachista HOM05D006796 ORTHO05D008615 2.3e-101 372.9 296 73.3
Gohir.D04G191000 Gossypium hirsutum HOM05D006796 ORTHO05D008615 3.9e-101 372.1 293 67.6
TWI31G0717 Tripterygium wilfordii HOM05D006796 ORTHO05D008615 8.7e-101 370.9 288 69.1
Gorai.012G186400 Gossypium raimondii HOM05D006796 ORTHO05D008615 1.1e-100 370.5 293 65.9
Duzib268G1785 Durio zibethinus HOM05D006796 ORTHO05D008615 1.5e-100 370.2 291 70.8
Lj3A1033T56 Lonicera japonica HOM05D006796 ORTHO05D008615 1.5e-100 370.2 291 68.7
CANSAT64G1871 Cannabis sativa HOM05D006796 ORTHO05D008615 4.7e-99 365.2 288 70.8
CsaV3_5G022970 Cucumis sativus L. HOM05D006796 ORTHO05D008615 1.1e-98 364.0 287 69.7
ClCG09G022060 Citrullus lanatus HOM05D006796 ORTHO05D008615 1.4e-98 363.6 287 68.6
Aqoxy3G00482 Aquilegia oxysepala HOM05D006796 ORTHO05D008615 2.0e-97 359.8 302 68.5
Ca_04876_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 2.6e-97 359.4 287 65.2
Cpa.g.sc1.63 Carica papaya HOM05D006796 ORTHO05D008615 3.4e-97 359.0 283 69.3
Lj2g0006920 Lotus japonicus HOM05D006796 ORTHO05D008615 4.4e-97 358.6 287 67.2
Phvul.002G103200 Phaseolus vulgaris HOM05D006796 ORTHO05D008615 9.9e-97 357.5 288 67.0
VMungo1215G0648 Vigna mungo HOM05D006796 ORTHO05D008615 1.3e-96 357.1 288 67.4
Gohir.D04G190901 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.7e-96 356.7 286 65.0
Cc11_g12630 Coffea canephora HOM05D006796 ORTHO05D008615 2.2e-96 356.3 290 68.3
PGR102G1583 Punica granatum HOM05D006796 ORTHO05D008615 1.9e-95 353.2 285 70.2
CAN.G964.30 Capsicum annuum HOM05D006796 ORTHO05D008615 5.4e-95 351.7 287 65.9
PGSC0003DMG400028345 Solanum tuberosum HOM05D006796 ORTHO05D008615 5.4e-95 351.7 289 69.6
TPR.G19931 Trifolium pratense HOM05D006796 ORTHO05D008615 7.1e-95 351.3 288 65.6
Glyma.01G052700 Glycine max HOM05D006796 ORTHO05D008615 9.3e-95 350.9 289 65.7
Eucgr.B03198 Eucalyptus grandis HOM05D006796 ORTHO05D008615 1.2e-94 350.5 288 64.9
Psat2g126440 Pisum sativum HOM05D006796 ORTHO05D008615 1.2e-94 350.5 287 64.1
Prupe.1G279300 Prunus persica HOM05D006796 ORTHO05D008615 1.2e-94 350.5 295 69.2
Sopen05g007830 Solanum pennellii HOM05D006796 ORTHO05D008615 1.2e-94 350.5 289 68.9
Nitab4.5_0000391g0260 Nicotiana tabacum HOM05D006796 ORTHO05D008615 1.6e-94 350.1 295 65.1
Glyma.02G111300 Glycine max HOM05D006796 ORTHO05D008615 1.7e-93 346.7 288 65.3
Cfa008932 Carpinus fangiana HOM05D006796 ORTHO05D008615 2.3e-93 346.3 417 50.6
MELO3C002984.2 Cucumis melo HOM05D006796 ORTHO05D008615 3.9e-93 345.5 325 61.2
PSO478G1165 Papaver somniferum HOM05D006796 ORTHO05D008615 8.7e-93 344.4 291 70.8
SalBow8G2627 Salvia bowleyana HOM05D006796 ORTHO05D008615 1.9e-92 343.2 286 67.5
Peaxi162Scf00222g00236 Petunia axillaris HOM05D006796 ORTHO05D008615 4.3e-92 342.0 289 65.4
CiPaw.05G129900 Carya illinoinensis HOM05D006796 ORTHO05D008615 9.6e-92 340.9 297 67.0
PSO017G7370 Papaver somniferum HOM05D006796 ORTHO05D008615 2.1e-91 339.7 291 70.1
Migut.L01249 Erythranthe guttata HOM05D006796 ORTHO05D008615 6.2e-91 338.2 289 65.1
MSTRG.13431 Avicennia marina HOM05D006796 ORTHO05D008615 3.1e-90 335.9 287 64.1
Lalb_Chr10g0098461 Lupinus albus HOM05D006796 ORTHO05D008615 6.9e-90 334.7 288 67.0
QL03p069702 Quercus lobata HOM05D006796 ORTHO05D008615 2.0e-89 333.2 369 55.6
CDE02G1750 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 1.3e-88 330.5 288 63.2
Hma1.2p1_0354F.1_g133830 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 2.9e-88 329.3 203 80.8
Oeu055099.3 Olea europaea HOM05D006796 ORTHO05D008615 6.4e-88 328.2 355 55.8
Lsat_1_v5_gn_4_10660 Lactuca sativa HOM05D006796 ORTHO05D008615 3.2e-87 325.9 299 63.2
Hund25209 Selenicereus undatus HOM05D006796 ORTHO05D008615 4.2e-87 325.5 283 62.5
MD16G1067400 Malus domestica HOM05D006796 ORTHO05D008615 9.3e-87 324.3 292 66.8
EL10Ac6g13260 Beta vulgaris HOM05D006796 ORTHO05D008615 2.7e-86 322.8 281 61.2
CARHR014360 Cardamine hirsuta HOM05D006796 ORTHO05D008615 5.1e-85 318.5 288 62.2
MD13G1068600 Malus domestica HOM05D006796 ORTHO05D008615 1.9e-84 316.6 296 62.8
SGA_v2.0_scaffold63G21639 Striga asiatica HOM05D006796 ORTHO05D008615 5.6e-84 315.1 298 63.4
Thhalv10008453m.g Eutrema salsugineum HOM05D006796 ORTHO05D008615 7.4e-84 314.7 284 62.3
THA.LOC104805179 Tarenaya hassleriana HOM05D006796 ORTHO05D008615 7.4e-84 314.7 286 60.5
ATR0564G337 Amborella trichopoda HOM05D006796 ORTHO05D008615 1.6e-83 313.5 198 79.8
AUR62032832 Chenopodium quinoa HOM05D006796 ORTHO05D008615 1.1e-82 310.8 283 61.1
ECA234G4054 Erigeron canadensis HOM05D006796 ORTHO05D008615 1.1e-82 310.8 204 75.5
AT1G13990 Arabidopsis thaliana HOM05D006796 ORTHO05D008615 1.8e-82 310.1 288 64.2
MSTRG.2332 Avicennia marina HOM05D006796 ORTHO05D008615 2.4e-82 309.7 202 76.7
vmacro01347 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 4.0e-82 308.9 311 57.9
AL1G25830 Arabidopsis lyrata HOM05D006796 ORTHO05D008615 5.3e-82 308.5 288 63.5
COL.COLO4_27978 Corchorus olitorius HOM05D006796 ORTHO05D008615 9.0e-82 307.8 288 59.0
Sc11g0002140 Simmondsia chinensis HOM05D006796 ORTHO05D008615 2.6e-81 306.2 281 59.4
Carub.0001s1368 Capsella rubella HOM05D006796 ORTHO05D008615 5.5e-79 298.5 287 62.4
BcaC05g25295 Brassica carinata HOM05D006796 ORTHO05D008615 1.8e-77 293.5 285 58.2
C05p11750 Brassica napus HOM05D006796 ORTHO05D008615 1.8e-77 293.5 285 57.2
Aa31LG1G1040 Aethionema arabicum HOM05D006796 ORTHO05D008615 2.3e-77 293.1 333 52.3
AUR62005838 Chenopodium quinoa HOM05D006796 ORTHO05D008615 1.9e-76 290.0 281 59.1
BolC5t29921H Brassica oleracea HOM05D006796 ORTHO05D008615 3.3e-76 289.3 302 58.3
BraA06t24185Z Brassica rapa HOM05D006796 ORTHO05D008615 8.2e-75 284.6 316 56.3
HPP92_016903 Vanilla planifolia HOM05D006796 ORTHO05D008615 1.1e-74 284.3 282 55.3
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 2.0e-73 280.0 285 55.1
Os03g0168200 Oryza sativa ssp. japonica HOM05D006796 ORTHO05D008615 1.3e-72 277.3 195 70.8
Zm00001eb402440 Zea mays HOM05D006796 ORTHO05D008615 2.1e-70 270.0 195 69.2
Nitab4.5_0004906g0020 Nicotiana tabacum HOM05D006796 ORTHO05D008615 2.8e-67 259.6 154 82.5
Sed0012383 Sechium edule HOM05D006796 ORTHO05D008615 2.4e-66 256.5 244 61.1
Mapoly0042s0065 Marchantia polymorpha HOM05D006796 ORTHO05D008615 2.0e-65 253.4 206 63.6
HanXRQChr12g0379181 Helianthus annuus HOM05D006796 ORTHO05D008615 4.5e-65 252.3 252 58.7
A06p09990 Brassica napus HOM05D006796 ORTHO05D008615 5.5e-63 245.4 323 50.8
Potri.008G090900 Populus trichocarpa HOM05D006796 ORTHO05D008615 1.3e-56 224.2 189 65.6
Actinidia31964 Actinidia chinensis HOM05D006796 ORTHO05D008615 2.9e-56 223.0 133 86.5
arahy.Tifrunner.gnm1.ann1.T4YGUP Arachis hypogaea HOM05D006796 ORTHO05D008615 5.5e-55 218.8 161 70.8
Gohir.1Z049816 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.1e-52 211.1 131 80.2
Rhsim12G0078900 Rhododendron simsii HOM05D006796 ORTHO05D008615 2.0e-52 210.3 402 39.6
Medtr5g042520 Medicago truncatula HOM05D006796 ORTHO05D008615 3.7e-51 206.1 210 58.6
CBR_g41640 Chara braunii HOM05D006796 ORTHO05D008615 1.1e-47 194.5 217 50.2
Solyc05g013060.4 Solanum lycopersicum HOM05D006796 ORTHO05D008615 1.1e-44 184.5 198 60.6
SMO271G0176 Selaginella moellendorffii HOM05D006796 ORTHO05D008615 2.6e-44 183.3 211 50.7
Hma1.2p1_0354F.1_g133820 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 3.5e-41 172.9 97 86.6
AagrBONN_evm.TU.Sc2ySwM_344.1473 Anthoceros agrestis HOM05D006796 ORTHO05D008615 6.5e-32 142.1 130 59.2
vmacro01341 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 1.0e-29 134.8 226 43.4
CDE09G0941 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 3.4e-28 129.8 80 76.2
SEGI_14917 Sequoiadendron giganteum HOM05D006796 ORTHO05D008615 3.8e-24 116.3 75 74.7
Nn2g13928 Nelumbo nucifera HOM05D006796 ORTHO05D008615 5.0e-24 115.9 96 63.5
Oeu021077.1 Olea europaea HOM05D006796 ORTHO05D008615 8.6e-24 115.2 293 35.8
PRCOL_00001264 Prasinoderma coloniale HOM05D006796 ORTHO05D008615 4.0e-13 79.7 225 29.8
SalBow1G4829 Salvia bowleyana HOM05D006796 ORTHO05D000018 6.4e-11 72.4 58 63.8
Gohir.A12G247950 Gossypium hirsutum HOM05D006796 ORTHO05D008615 4.1e-10 69.7 84 41.7
Nn2g11199 Nelumbo nucifera HOM05D006796 ORTHO05D008615 3.5e-09 66.6 61 59.0
Ca_27564_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 6.6e-08 62.4 38 76.3
Ca_28040_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 2.5e-07 60.5 37 73.0
Ca_04476_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 3.3e-07 60.1 42 71.4
Ca_03868_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 9.5e-07 58.5 37 73.0


User provided reference genes

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