Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0655 Trochodendron aralioides HOM05D006361 ORTHO05D007824 6.9e-193 677.2 350 100.0
GSVIVG01000604001 Vitis vinifera HOM05D006361 ORTHO05D007824 3.8e-127 458.8 330 72.1
Nn4g24771 Nelumbo nucifera HOM05D006361 ORTHO05D007824 7.0e-121 438.0 343 68.2
CSS0002219 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 1.1e-116 424.1 342 65.8
CSS0021447 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 1.8e-116 423.3 347 65.4
Duzib251G0777 Durio zibethinus HOM05D006361 ORTHO05D007824 1.7e-114 416.8 321 66.7
Hma1.2p1_0068F.1_g037170 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 4.9e-114 415.2 326 66.9
Thecc.02G299900 Theobroma cacao HOM05D006361 ORTHO05D007824 6.0e-112 408.3 331 64.0
Dinv06050 Davidia involucrata HOM05D006361 ORTHO05D007824 1.7e-111 406.8 348 64.1
Lj6A727G89 Lonicera japonica HOM05D006361 ORTHO05D007824 5.0e-111 405.2 338 65.7
Cfa015091 Carpinus fangiana HOM05D006361 ORTHO05D007824 8.6e-111 404.4 330 63.3
QL03p040836 Quercus lobata HOM05D006361 ORTHO05D007824 1.1e-110 404.1 340 64.1
Aqoxy3G04165 Aquilegia oxysepala HOM05D006361 ORTHO05D007824 4.3e-110 402.1 320 64.7
Potri.010G099500 Populus trichocarpa HOM05D006361 ORTHO05D007824 5.6e-110 401.7 328 64.9
CiPaw.05G161000 Carya illinoinensis HOM05D006361 ORTHO05D007824 9.5e-110 401.0 333 64.6
Cpa.g.sc2.83 Carica papaya HOM05D006361 ORTHO05D007824 1.2e-109 400.6 333 61.9
Ciclev10005401m.g Citrus clementina HOM05D006361 ORTHO05D007824 2.8e-109 399.4 328 63.7
TWI74G1113 Tripterygium wilfordii HOM05D006361 ORTHO05D007824 6.2e-109 398.3 342 64.0
PSO063G1793 Papaver somniferum HOM05D006361 ORTHO05D007824 8.1e-109 397.9 327 65.4
Gohir.A03G114200 Gossypium hirsutum HOM05D006361 ORTHO05D007824 8.9e-108 394.4 327 63.6
Gorai.005G155100 Gossypium raimondii HOM05D006361 ORTHO05D007824 3.4e-107 392.5 327 63.3
Rhsim04G0169300 Rhododendron simsii HOM05D006361 ORTHO05D007824 3.4e-107 392.5 331 64.7
Gohir.D02G138700 Gossypium hirsutum HOM05D006361 ORTHO05D007824 4.4e-107 392.1 327 63.3
Sabra10G0072200 Salix brachista HOM05D006361 ORTHO05D007824 1.0e-103 380.9 350 59.4
CARHR009260 Cardamine hirsuta HOM05D006361 ORTHO05D007824 1.9e-102 376.7 327 59.6
Manes.15G141000 Manihot esculenta HOM05D006361 ORTHO05D007824 1.6e-101 373.6 330 61.2
Carub.0001s0863 Capsella rubella HOM05D006361 ORTHO05D007824 4.0e-100 369.0 334 57.5
PGR142G2205 Punica granatum HOM05D006361 ORTHO05D007824 4.0e-100 369.0 332 59.3
arahy.Tifrunner.gnm1.ann1.DP1KMD Arachis hypogaea HOM05D006361 ORTHO05D007824 1.5e-99 367.1 325 59.7
QL03p040440 Quercus lobata HOM05D006361 ORTHO05D007824 1.5e-99 367.1 446 49.1
Eucgr.G02045 Eucalyptus grandis HOM05D006361 ORTHO05D007824 2.0e-99 366.7 332 58.1
FvH4_4g35990 Fragaria vesca HOM05D006361 ORTHO05D007824 2.6e-99 366.3 333 61.0
ClCG11G000690 Citrullus lanatus HOM05D006361 ORTHO05D007824 4.4e-99 365.5 332 62.0
FAN22G0651 Fragaria x ananassa HOM05D006361 ORTHO05D007824 4.4e-99 365.5 333 61.0
FAN12G2025 Fragaria x ananassa HOM05D006361 ORTHO05D007824 7.6e-99 364.8 333 60.7
Lj5g0003295 Lotus japonicus HOM05D006361 ORTHO05D007824 9.9e-99 364.4 327 59.6
arahy.Tifrunner.gnm1.ann1.L5ZJMR Arachis hypogaea HOM05D006361 ORTHO05D007824 1.3e-98 364.0 325 59.1
Glyma.20G108700 Glycine max HOM05D006361 ORTHO05D007824 3.2e-97 359.4 325 59.7
Atru.chr11.1031 Acer truncatum HOM05D006361 ORTHO05D007824 4.2e-97 359.0 339 58.7
Cc11_g04970 Coffea canephora HOM05D006361 ORTHO05D007824 5.4e-97 358.6 325 60.0
Thhalv10008047m.g Eutrema salsugineum HOM05D006361 ORTHO05D007824 5.4e-97 358.6 328 58.2
AL1G19780 Arabidopsis lyrata HOM05D006361 ORTHO05D007824 9.2e-97 357.8 331 58.0
arahy.Tifrunner.gnm1.ann1.D0LIF0 Arachis hypogaea HOM05D006361 ORTHO05D007824 9.2e-97 357.8 333 57.1
FAN17G1000 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.2e-96 357.5 342 58.8
Sed0017139 Sechium edule HOM05D006361 ORTHO05D007824 4.6e-96 355.5 338 58.6
PSO782G3204 Papaver somniferum HOM05D006361 ORTHO05D007824 6.0e-96 355.1 327 59.3
Lalb_Chr02g0143351 Lupinus albus HOM05D006361 ORTHO05D007824 7.8e-96 354.8 327 60.9
AT1G09290 Arabidopsis thaliana HOM05D006361 ORTHO05D007824 1.0e-95 354.4 327 58.4
THA.LOC104815221 Tarenaya hassleriana HOM05D006361 ORTHO05D007824 2.3e-95 353.2 342 56.4
Oeu005683.1 Olea europaea HOM05D006361 ORTHO05D007824 3.9e-95 352.4 327 57.2
Prupe.1G340600 Prunus persica HOM05D006361 ORTHO05D007824 5.1e-95 352.1 333 59.5
BcaB03g13282 Brassica carinata HOM05D006361 ORTHO05D007824 6.6e-95 351.7 335 56.4
FAN07G0576 Fragaria x ananassa HOM05D006361 ORTHO05D007824 6.6e-95 351.7 333 59.8
PGSC0003DMG400030230 Solanum tuberosum HOM05D006361 ORTHO05D007824 6.6e-95 351.7 346 56.9
Sopen01g010510 Solanum pennellii HOM05D006361 ORTHO05D007824 8.7e-95 351.3 346 55.8
HanXRQChr08g0224371 Helianthus annuus HOM05D006361 ORTHO05D007824 1.1e-94 350.9 323 57.6
Peaxi162Scf00705g00017 Petunia axillaris HOM05D006361 ORTHO05D007824 1.5e-94 350.5 337 55.8
Sopen01g014340 Solanum pennellii HOM05D006361 ORTHO05D007824 1.5e-94 350.5 345 55.7
Nitab4.5_0003889g0010 Nicotiana tabacum HOM05D006361 ORTHO05D007824 1.9e-94 350.1 332 57.5
Aa31LG1G5840 Aethionema arabicum HOM05D006361 ORTHO05D007824 7.3e-94 348.2 329 56.5
Sp1g07900 Schrenkiella parvula HOM05D006361 ORTHO05D007824 7.3e-94 348.2 331 55.6
CAN.G282.86 Capsicum annuum HOM05D006361 ORTHO05D007824 9.6e-94 347.8 335 58.2
DCAR_030322 Daucus carota HOM05D006361 ORTHO05D007824 2.8e-93 346.3 331 57.7
MD16G1010000 Malus domestica HOM05D006361 ORTHO05D007824 1.4e-92 344.0 333 58.6
RcHm_v2.0_Chr4g0445621 Rosa chinensis HOM05D006361 ORTHO05D007824 1.4e-92 344.0 331 58.0
BraA08t35382Z Brassica rapa HOM05D006361 ORTHO05D007824 1.8e-92 343.6 331 57.4
Nitab4.5_0000944g0110 Nicotiana tabacum HOM05D006361 ORTHO05D007824 3.4e-91 339.3 333 56.8
VMungo0720G0403 Vigna mungo HOM05D006361 ORTHO05D007824 4.4e-91 339.0 327 59.3
A08p34700 Brassica napus HOM05D006361 ORTHO05D007824 7.6e-91 338.2 331 55.3
BcaC07g38489 Brassica carinata HOM05D006361 ORTHO05D007824 9.9e-91 337.8 331 55.9
C08p12590 Brassica napus HOM05D006361 ORTHO05D007824 9.9e-91 337.8 331 55.9
AUR62003478 Chenopodium quinoa HOM05D006361 ORTHO05D007824 9.9e-91 337.8 327 56.9
MELO3C022554.2 Cucumis melo HOM05D006361 ORTHO05D007824 1.3e-90 337.4 332 58.4
CDE04G0863 Ceratophyllum demersum HOM05D006361 ORTHO05D007824 9.3e-89 331.3 333 54.4
BolC8t48897H Brassica oleracea HOM05D006361 ORTHO05D007824 3.5e-88 329.3 335 55.5
Lsat_1_v5_gn_8_33920 Lactuca sativa HOM05D006361 ORTHO05D007824 6.0e-88 328.6 342 54.4
Os02g0672400 Oryza sativa ssp. japonica HOM05D006361 ORTHO05D007824 6.6e-87 325.1 321 56.1
Hma1.2p1_0068F.1_g037190 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 8.7e-87 324.7 265 65.3
HPP92_007296 Vanilla planifolia HOM05D006361 ORTHO05D007824 8.7e-87 324.7 341 54.0
ECA233G5480 Erigeron canadensis HOM05D006361 ORTHO05D007824 1.1e-86 324.3 323 55.4
COL.COLO4_27543 Corchorus olitorius HOM05D006361 ORTHO05D007824 1.6e-85 320.5 273 62.3
EL10Ac6g15395 Beta vulgaris HOM05D006361 ORTHO05D007824 4.8e-85 318.9 325 56.0
Psat6g231640 Pisum sativum HOM05D006361 ORTHO05D007824 9.0e-84 314.7 325 55.1
Medtr1g112360 Medicago truncatula HOM05D006361 ORTHO05D007824 3.8e-82 309.3 328 53.7
arahy.Tifrunner.gnm1.ann1.3EIQ25 Arachis hypogaea HOM05D006361 ORTHO05D007824 7.1e-81 305.1 360 50.3
ATR0807G049 Amborella trichopoda HOM05D006361 ORTHO05D007824 7.9e-80 301.6 336 49.4
TPR.G2489 Trifolium pratense HOM05D006361 ORTHO05D007824 1.3e-79 300.8 327 53.2
AUR62017787 Chenopodium quinoa HOM05D006361 ORTHO05D007824 6.7e-79 298.5 339 51.9
Ah.03g147180 Amaranthus hybridus HOM05D006361 ORTHO05D007824 4.3e-78 295.8 326 52.5
Ca_11202_v3 Cicer arietinum L. HOM05D006361 ORTHO05D007824 7.1e-73 278.5 320 49.7
Phvul.007G020000 Phaseolus vulgaris HOM05D006361 ORTHO05D007824 5.1e-71 272.3 280 53.6
CsaV3_5G012340 Cucumis sativus L. HOM05D006361 ORTHO05D007824 6.2e-69 265.4 271 56.5
SEGI_09761 Sequoiadendron giganteum HOM05D006361 ORTHO05D007824 6.2e-69 265.4 369 42.8
vmacro08586 Vaccinium macrocarpon HOM05D006361 ORTHO05D007824 2.2e-66 256.9 429 40.6
Sc11g0003580 Simmondsia chinensis HOM05D006361 ORTHO05D007824 2.5e-57 226.9 233 55.4
Haze_10736 Corylus avellana HOM05D006361 ORTHO05D007824 9.1e-52 208.4 184 59.8
Haze_10738 Corylus avellana HOM05D006361 ORTHO05D007824 3.8e-50 203.0 199 56.3
arahy.Tifrunner.gnm1.ann1.10LCJA Arachis hypogaea HOM05D006361 ORTHO05D007824 4.5e-43 179.5 289 41.2
Hund12782 Selenicereus undatus HOM05D006361 ORTHO05D007824 1.6e-40 171.0 137 64.2
Mapoly0161s0009 Marchantia polymorpha HOM05D006361 ORTHO05D007824 2.7e-40 170.2 366 32.0
AagrBONN_evm.TU.Sc2ySwM_228.545 Anthoceros agrestis HOM05D006361 ORTHO05D007824 6.1e-40 169.1 360 34.7
Actinidia34045 Actinidia chinensis HOM05D006361 ORTHO05D007824 2.9e-34 150.2 122 64.8
MBI06_g04759_MAGBIO Magnolia biondii HOM05D006361 ORTHO05D007824 6.1e-32 142.5 98 75.5
Glyma.10G280900 Glycine max HOM05D006361 ORTHO05D007824 2.8e-29 133.7 234 37.6
CBR_g51236 Chara braunii HOM05D006361 ORTHO05D007824 3.1e-28 130.2 466 25.8
Actinidia34046 Actinidia chinensis HOM05D006361 ORTHO05D007824 1.2e-24 118.2 81 75.3
Oeu038968.1 Olea europaea HOM05D006361 ORTHO05D007824 6.3e-21 105.9 177 37.9
Zm00001eb250300 Zea mays HOM05D006361 ORTHO05D007824 5.4e-20 102.8 112 52.7
VMungo0251G1708 Vigna mungo HOM05D006361 ORTHO05D007824 7.0e-20 102.4 104 51.9
Pp3c10_230 Physcomitrium patens HOM05D006361 ORTHO05D007824 1.6e-19 101.3 250 30.4
Cc00_g30730 Coffea canephora HOM05D006361 ORTHO05D007824 3.3e-17 93.6 58 75.9
Sabra19G0029800 Salix brachista HOM05D006361 ORTHO05D007824 2.8e-16 90.5 56 73.2
SMO115G0015 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 7.5e-14 82.4 267 26.2
Cc00_g15950 Coffea canephora HOM05D006361 ORTHO05D007824 6.3e-13 79.3 55 70.9
SMO166G0069 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 8.3e-13 79.0 174 29.3
Cc00_g35660 Coffea canephora HOM05D006361 ORTHO05D007824 2.7e-11 73.9 54 63.0
Hma1.2p1_0068F.1_g037180 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 2.7e-11 73.9 45 73.3
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 3.5e-11 73.6 48 64.6
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 4.5e-11 73.2 42 71.4
QL03p040408 Quercus lobata HOM05D006361 ORTHO05D007824 1.5e-06 58.2 43 58.1


User provided reference genes

Program Settings