Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0637 Trochodendron aralioides HOM05D005710 ORTHO05D004657 1.6e-74 282.7 144 100.0
Nn4g23370 Nelumbo nucifera HOM05D005710 ORTHO05D004657 6.0e-34 147.9 136 61.0
Hma1.2p1_0481F.1_g161930 Hydrangea macrophylla HOM05D005710 ORTHO05D004657 2.7e-26 122.5 147 49.7
CSS0045690 Camellia sinensis var. sinensis HOM05D005710 ORTHO05D004657 1.3e-25 120.2 147 47.6
TAR629G0087 Trochodendron aralioides HOM05D005710 ORTHO05D004657 5.1e-25 118.2 105 62.9
Aqoxy3G03578 Aquilegia oxysepala HOM05D005710 ORTHO05D004657 3.6e-23 112.1 153 44.4
QL02p039943 Quercus lobata HOM05D005710 ORTHO05D004657 4.7e-23 111.7 150 42.7
Prupe.3G257800 Prunus persica HOM05D005710 ORTHO05D004657 2.4e-22 109.4 153 45.1
Dinv34961 Davidia involucrata HOM05D005710 ORTHO05D004657 4.0e-22 108.6 97 58.8
MBI16_g30408_MAGBIO Magnolia biondii HOM05D001913 ORTHO05D001880 3.5e-18 95.5 178 39.9
MD09G1062500 Malus domestica HOM05D005710 ORTHO05D004657 1.1e-16 90.5 146 45.9
FAN14G2617 Fragaria x ananassa HOM05D005710 ORTHO05D004657 1.5e-16 90.1 142 43.7
Haze_14452 Corylus avellana HOM05D005710 ORTHO05D004657 1.9e-16 89.7 147 41.5
Cfa007637 Carpinus fangiana HOM05D005710 ORTHO05D004657 2.5e-16 89.4 147 40.1
FAN05G5426 Fragaria x ananassa HOM05D005710 ORTHO05D004657 4.3e-16 88.6 142 43.0
FAN09G1437 Fragaria x ananassa HOM05D005710 ORTHO05D004657 4.3e-16 88.6 142 43.0
Haze_14462 Corylus avellana HOM05D005710 ORTHO05D004657 5.6e-16 88.2 147 40.8
FvH4_6g47270 Fragaria vesca HOM05D005710 ORTHO05D004657 5.6e-16 88.2 146 42.5
Rhsim08G0074100 Rhododendron simsii HOM05D005710 ORTHO05D004657 7.3e-16 87.8 148 39.9
CiPaw.04G057600 Carya illinoinensis HOM05D005710 ORTHO05D004657 2.1e-15 86.3 136 39.7
vmacro18155 Vaccinium macrocarpon HOM05D005710 ORTHO05D004657 2.1e-15 86.3 134 42.5
RcHm_v2.0_Chr2g0166341 Rosa chinensis HOM05D005710 ORTHO05D004657 3.6e-15 85.5 136 42.6
FAN02G2871 Fragaria x ananassa HOM05D005710 ORTHO05D004657 8.1e-15 84.3 143 42.7
Hma1.2p1_1813F.1_g303710 Hydrangea macrophylla HOM05D005710 ORTHO05D004657 2.4e-14 82.8 102 50.0
MD00G1156300 Malus domestica HOM05D005710 ORTHO05D004657 4.0e-14 82.0 141 44.0
Actinidia01981 Actinidia chinensis HOM05D005710 ORTHO05D004657 2.0e-13 79.7 139 46.0
CsaV3_5G038440 Cucumis sativus L. HOM05D005710 ORTHO05D004657 2.9e-12 75.9 143 39.2
Atru.chr8.406 Acer truncatum HOM05D005710 ORTHO05D004657 1.1e-11 73.9 140 40.0
Ciclev10011685m.g Citrus clementina HOM05D005710 ORTHO05D004657 1.9e-11 73.2 147 38.1
DCAR_011051 Daucus carota HOM05D005710 ORTHO05D004657 4.2e-11 72.0 153 42.5
Actinidia07818 Actinidia chinensis HOM05D005710 ORTHO05D004657 9.3e-11 70.9 89 51.7
Thecc.04G091900 Theobroma cacao HOM05D005710 ORTHO05D004657 7.9e-10 67.8 141 38.3
Oeu025712.1 Olea europaea HOM05D005710 ORTHO05D004657 1.0e-09 67.4 150 38.0
CANSAT64G1937 Cannabis sativa HOM05D005710 ORTHO05D004657 3.0e-09 65.9 150 37.3
Cpa.g.sc14.156 Carica papaya HOM05D005710 ORTHO05D004657 5.1e-09 65.1 147 36.7
Duzib187G0917 Durio zibethinus HOM05D005710 ORTHO05D004657 6.7e-09 64.7 144 36.1
Duzib147G0411 Durio zibethinus HOM05D005710 ORTHO05D004657 8.7e-09 64.3 141 36.2
MELO3C022025.2 Cucumis melo HOM05D005710 ORTHO05D004657 1.1e-08 63.9 141 36.9
Manes.02G052100 Manihot esculenta HOM05D005710 ORTHO05D004657 1.9e-08 63.2 153 35.9
Potri.017G091100 Populus trichocarpa HOM05D005710 ORTHO05D004657 6.2e-07 58.2 148 33.8
Sed0007565 Sechium edule HOM05D005710 ORTHO05D004657 6.2e-07 58.2 135 35.6
Sc11g0004700 Simmondsia chinensis HOM05D005710 ORTHO05D004657 6.2e-07 58.2 140 35.0
COL.COLO4_03731 Corchorus olitorius HOM05D005710 ORTHO05D004657 2.4e-06 56.2 141 33.3


User provided reference genes

Program Settings