Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0507 Trochodendron aralioides HOM05D005924 ORTHO05D007290 2.8e-51 204.9 99 100.0
Duzib213G0633 Durio zibethinus HOM05D005924 ORTHO05D007290 1.3e-11 73.2 97 43.3
TWI39G1162 Tripterygium wilfordii HOM05D005924 ORTHO05D007290 1.7e-11 72.8 96 41.7
CiPaw.12G137600 Carya illinoinensis HOM05D005924 ORTHO05D007290 2.2e-11 72.4 96 41.7
MD03G1184300 Malus domestica HOM05D005924 ORTHO05D007290 2.2e-11 72.4 96 40.6
MD11G1201100 Malus domestica HOM05D005924 ORTHO05D007290 3.7e-11 71.6 99 39.4
Sp6g17560 Schrenkiella parvula HOM05D005924 ORTHO05D007290 3.7e-11 71.6 76 47.4
TAR629G1982 Trochodendron aralioides HOM05D001060 ORTHO05D000905 3.7e-11 71.6 97 41.2
ATR0624G098 Amborella trichopoda HOM05D005924 ORTHO05D007290 4.9e-11 71.2 96 39.6
Thecc.07G014800 Theobroma cacao HOM05D005924 ORTHO05D007290 8.3e-11 70.5 97 42.3
Ciclev10009817m.g Citrus clementina HOM05D005924 ORTHO05D007290 1.1e-10 70.1 96 40.6
TWI38G0037 Tripterygium wilfordii HOM05D005924 ORTHO05D007290 1.1e-10 70.1 97 40.2
unitig_0.g996 Utricularia gibba HOM05D005924 ORTHO05D007290 1.1e-10 70.1 83 45.8
Prupe.4G242300 Prunus persica HOM05D005924 ORTHO05D007290 1.9e-10 69.3 97 39.2
CSS0025987 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 2.4e-10 68.9 89 44.9
CSS0049690 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 2.4e-10 68.9 89 44.9
COL.COLO4_09820 Corchorus olitorius HOM05D005924 ORTHO05D007290 2.4e-10 68.9 98 41.8
Thhalv10014966m.g Eutrema salsugineum HOM05D005924 ORTHO05D007290 2.4e-10 68.9 83 47.0
FAN25G0770 Fragaria x ananassa HOM05D005924 ORTHO05D007290 3.2e-10 68.6 87 40.2
Hma1.2p1_0036F.1_g022440 Hydrangea macrophylla HOM05D005924 ORTHO05D007290 3.2e-10 68.6 84 41.7
Manes.15G060600 Manihot esculenta HOM05D005924 ORTHO05D007290 3.2e-10 68.6 94 40.4
Sabra16G0240500 Salix brachista HOM05D005924 ORTHO05D007290 3.2e-10 68.6 83 44.6
Manes.03G140800 Manihot esculenta HOM05D005924 ORTHO05D007290 5.4e-10 67.8 90 43.3
Carub.0008s1601 Capsella rubella HOM05D005924 ORTHO05D007290 7.1e-10 67.4 78 42.3
RcHm_v2.0_Chr5g0053761 Rosa chinensis HOM05D005924 ORTHO05D007290 7.1e-10 67.4 71 45.1
Cfa020200 Carpinus fangiana HOM05D005924 ORTHO05D007290 9.2e-10 67.0 96 36.5
Medtr5g095700 Medicago truncatula HOM05D005924 ORTHO05D007290 9.2e-10 67.0 99 42.4
Ca_06392_v3 Cicer arietinum L. HOM05D005924 ORTHO05D007290 1.2e-09 66.6 97 39.2
MBI19_g12833_MAGBIO Magnolia biondii HOM05D005924 ORTHO05D007290 1.2e-09 66.6 86 37.2
Dinv40851 Davidia involucrata HOM05D005924 ORTHO05D007290 1.6e-09 66.2 75 48.0
FvH4_3g29370 Fragaria vesca HOM05D005924 ORTHO05D007290 1.6e-09 66.2 89 38.2
FAN11G0697 Fragaria x ananassa HOM05D005924 ORTHO05D007290 1.6e-09 66.2 89 38.2
Gohir.D05G383300 Gossypium hirsutum HOM05D005924 ORTHO05D007290 1.6e-09 66.2 93 44.1
CSS0023895 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 2.1e-09 65.9 94 41.5
Nn1g03196 Nelumbo nucifera HOM05D005924 ORTHO05D007290 2.1e-09 65.9 86 40.7
Lsat_1_v5_gn_5_1420 Lactuca sativa HOM05D005924 ORTHO05D007290 2.7e-09 65.5 95 41.1
AT5G55640 Arabidopsis thaliana HOM05D005924 ORTHO05D007290 3.5e-09 65.1 80 45.0
BcaC04g20212 Brassica carinata HOM05D005924 ORTHO05D007290 3.5e-09 65.1 70 48.6
C09p46620 Brassica napus HOM05D005924 ORTHO05D007290 3.5e-09 65.1 70 48.6
BolC9t57514H Brassica oleracea HOM05D005924 ORTHO05D007290 3.5e-09 65.1 70 50.0
Potri.001G367200 Populus trichocarpa HOM05D005924 ORTHO05D007290 3.5e-09 65.1 83 42.2
Haze_09815 Corylus avellana HOM05D005924 ORTHO05D007290 4.6e-09 64.7 96 36.5
MELO3C024930.2 Cucumis melo HOM05D005924 ORTHO05D007290 4.6e-09 64.7 82 42.7
PSO210G6324 Papaver somniferum HOM05D005924 ORTHO05D007290 4.6e-09 64.7 86 39.5
PSO302G0279 Papaver somniferum HOM05D005924 ORTHO05D007290 4.6e-09 64.7 86 39.5
PGR083G1797 Punica granatum HOM05D005924 ORTHO05D007290 4.6e-09 64.7 86 41.9
ClCG09G021250 Citrullus lanatus HOM05D005924 ORTHO05D007290 6.0e-09 64.3 83 42.2
QL08p004337 Quercus lobata HOM05D005924 ORTHO05D007290 6.0e-09 64.3 96 37.5
QL11p054318 Quercus lobata HOM05D005924 ORTHO05D007290 6.0e-09 64.3 96 37.5
CiPaw.11G203100 Carya illinoinensis HOM05D005924 ORTHO05D007290 7.8e-09 63.9 97 39.2
FAN21G3132 Fragaria x ananassa HOM05D005924 ORTHO05D007290 7.8e-09 63.9 89 37.1
Psat2g007680 Pisum sativum HOM05D000001 ORTHO05D000003 7.8e-09 63.9 92 39.1
ECA246G3128 Erigeron canadensis HOM05D005924 ORTHO05D007290 1.0e-08 63.5 88 42.0
Gohir.A04G006200 Gossypium hirsutum HOM05D005924 ORTHO05D007290 1.0e-08 63.5 93 43.0
vmacro09651 Vaccinium macrocarpon HOM05D005924 ORTHO05D007290 1.0e-08 63.5 98 40.8
Eucgr.F02053 Eucalyptus grandis HOM05D005924 ORTHO05D007290 1.7e-08 62.8 86 40.7
Actinidia26779 Actinidia chinensis HOM05D005924 ORTHO05D007290 2.3e-08 62.4 95 36.8
HanXRQChr08g0231191 Helianthus annuus HOM05D005924 ORTHO05D007290 2.3e-08 62.4 82 41.5
Phvul.008G278700 Phaseolus vulgaris HOM05D005924 ORTHO05D007290 3.0e-08 62.0 88 40.9
Sed0014433 Sechium edule HOM05D005924 ORTHO05D007290 3.0e-08 62.0 96 38.5
Hund23125 Selenicereus undatus HOM05D005924 ORTHO05D007290 3.0e-08 62.0 95 40.0
AUR62036442 Chenopodium quinoa HOM05D005924 ORTHO05D007290 3.9e-08 61.6 95 38.9
Mapoly0038s0106 Marchantia polymorpha HOM05D005924 ORTHO05D007290 3.9e-08 61.6 96 37.5
EL10Ac4g07594 Beta vulgaris HOM05D005924 ORTHO05D007290 6.6e-08 60.8 96 38.5
Dinv10325 Davidia involucrata HOM05D005924 ORTHO05D007290 6.6e-08 60.8 88 39.8
TPR.G8617 Trifolium pratense HOM05D005924 ORTHO05D007290 6.6e-08 60.8 83 37.3
Actinidia30411 Actinidia chinensis HOM05D005924 ORTHO05D007290 8.6e-08 60.5 95 36.8
CsaV3_7G015090 Cucumis sativus L. HOM05D005924 ORTHO05D007290 8.6e-08 60.5 82 40.2
Nitab4.5_0014607g0010 Nicotiana tabacum HOM05D005924 ORTHO05D007290 8.6e-08 60.5 94 33.0
Peaxi162Scf01164g00127 Petunia axillaris HOM05D005924 ORTHO05D007290 8.6e-08 60.5 75 37.3
Sc16g0008020 Simmondsia chinensis HOM05D005924 ORTHO05D007290 8.6e-08 60.5 96 40.6
Aqoxy1G04252 Aquilegia oxysepala HOM05D005924 ORTHO05D007290 1.1e-07 60.1 72 41.7
Migut.H01759 Erythranthe guttata HOM05D005924 ORTHO05D007290 1.1e-07 60.1 74 36.5
MSTRG.13019 Avicennia marina HOM05D005924 ORTHO05D007290 1.5e-07 59.7 96 38.5
Lalb_Chr04g0247881 Lupinus albus HOM05D005924 ORTHO05D007290 1.5e-07 59.7 98 37.8
Oeu057095.1 Olea europaea HOM05D005924 ORTHO05D007290 1.5e-07 59.7 87 35.6
Aa31LG3G11590 Aethionema arabicum HOM05D005924 ORTHO05D007290 1.9e-07 59.3 56 48.2
PGSC0003DMG400022173 Solanum tuberosum HOM05D005924 ORTHO05D007290 1.9e-07 59.3 97 33.0
CANSAT11G0122 Cannabis sativa HOM05D005924 ORTHO05D007290 3.3e-07 58.5 101 36.6
AUR62017085 Chenopodium quinoa HOM05D005924 ORTHO05D007290 3.3e-07 58.5 74 41.9
AUR62036411 Chenopodium quinoa HOM05D005924 ORTHO05D007290 3.3e-07 58.5 95 37.9
Rhsim04G0012900 Rhododendron simsii HOM05D005924 ORTHO05D007290 3.3e-07 58.5 87 37.9
Solyc07g065480.3 Solanum lycopersicum HOM05D005924 ORTHO05D007290 3.3e-07 58.5 73 35.6
Sopen07g033690 Solanum pennellii HOM05D005924 ORTHO05D007290 3.3e-07 58.5 73 35.6
TAR626G0711 Trochodendron aralioides HOM05D005924 ORTHO05D007290 3.3e-07 58.5 85 38.8
GSVIVG01014668001 Vitis vinifera HOM05D005924 ORTHO05D007290 3.3e-07 58.5 84 39.3
BraA10t43385Z Brassica rapa HOM05D005924 ORTHO05D007290 4.3e-07 58.2 73 43.8
AL8G31220 Arabidopsis lyrata HOM05D005924 ORTHO05D007290 5.6e-07 57.8 78 46.2
arahy.Tifrunner.gnm1.ann1.7P25LN Arachis hypogaea HOM05D005924 ORTHO05D007290 7.3e-07 57.4 95 34.7
arahy.Tifrunner.gnm1.ann1.RJW0MD Arachis hypogaea HOM05D005924 ORTHO05D007290 7.3e-07 57.4 95 34.7
Nitab4.5_0000461g0270 Nicotiana tabacum HOM05D005924 ORTHO05D007290 7.3e-07 57.4 73 34.2
SEGI_16066 Sequoiadendron giganteum HOM05D005924 ORTHO05D007290 7.3e-07 57.4 99 35.4
Lj6g0020710 Lotus japonicus HOM05D005924 ORTHO05D007290 9.5e-07 57.0 85 40.0
Oeu049375.1 Olea europaea HOM05D005924 ORTHO05D007290 9.5e-07 57.0 76 36.8
Glyma.02G300000 Glycine max HOM05D005924 ORTHO05D007290 1.2e-06 56.6 83 38.6
VMungo0647G1823 Vigna mungo HOM05D005924 ORTHO05D007290 1.2e-06 56.6 88 38.6
A10p12930 Brassica napus HOM05D005924 ORTHO05D007290 1.6e-06 56.2 73 43.8
Cc05_g14880 Coffea canephora HOM05D005924 ORTHO05D007290 2.1e-06 55.8 86 39.5
Pp3c5_24890 Physcomitrium patens HOM05D005924 ORTHO05D007290 2.1e-06 55.8 88 35.2
THA.LOC104811656 Tarenaya hassleriana HOM05D005924 ORTHO05D007290 2.1e-06 55.8 92 34.8
CDE10G1040 Ceratophyllum demersum HOM05D005924 ORTHO05D007290 2.8e-06 55.5 72 41.7
CARHR268960 Cardamine hirsuta HOM05D005924 ORTHO05D007290 3.6e-06 55.1 66 43.9
CDE10G1343 Ceratophyllum demersum HOM05D005924 ORTHO05D007290 3.6e-06 55.1 72 40.3
DCAR_018844 Daucus carota HOM05D005924 ORTHO05D007290 3.6e-06 55.1 87 36.8
Sed0006731 Sechium edule HOM05D005924 ORTHO05D007290 3.6e-06 55.1 75 40.0
SGA_v2.0_scaffold8G04406 Striga asiatica HOM05D005924 ORTHO05D007290 3.6e-06 55.1 99 35.4
Cpa.g.sc12.154 Carica papaya HOM05D005924 ORTHO05D007290 4.7e-06 54.7 78 41.0
Gorai.009G449900 Gossypium raimondii HOM05D005924 ORTHO05D007290 8.1e-06 53.9 78 42.3
Pp3c6_3770 Physcomitrium patens HOM05D005924 ORTHO05D007290 8.1e-06 53.9 93 35.5


User provided reference genes

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