Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0503 Trochodendron aralioides HOM05D007389 ORTHO05D009400 6.6e-199 697.2 357 100.0
CSS0013871 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 9.0e-148 527.3 354 75.7
GSVIVG01011940001 Vitis vinifera HOM05D007389 ORTHO05D009400 1.2e-147 526.9 353 74.8
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 1.2e-144 516.9 354 74.6
CiPaw.15G004300 Carya illinoinensis HOM05D007389 ORTHO05D009400 3.5e-144 515.4 354 75.1
Cfa018619 Carpinus fangiana HOM05D007389 ORTHO05D009400 1.3e-143 513.5 354 73.4
Actinidia16624 Actinidia chinensis HOM05D007389 ORTHO05D009400 4.8e-141 505.0 354 72.0
CSS0047863 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 5.8e-139 498.0 339 75.2
Rhsim09G0111300 Rhododendron simsii HOM05D007389 ORTHO05D009400 1.1e-134 483.8 353 70.0
Nn3g17765 Nelumbo nucifera HOM05D007389 ORTHO05D009400 1.4e-132 476.9 351 69.2
Prupe.1G306500 Prunus persica HOM05D007389 ORTHO05D009400 4.1e-132 475.3 354 68.4
RcHm_v2.0_Chr4g0435681 Rosa chinensis HOM05D007389 ORTHO05D009400 6.9e-132 474.6 355 69.3
Hma1.2p1_0406F.1_g146090 Hydrangea macrophylla HOM05D007389 ORTHO05D009400 1.2e-131 473.8 353 69.1
Eucgr.B03042 Eucalyptus grandis HOM05D007389 ORTHO05D009400 4.5e-131 471.9 355 65.9
Thecc.02G359800 Theobroma cacao HOM05D007389 ORTHO05D009400 1.7e-130 469.9 354 66.4
Gorai.008G185300 Gossypium raimondii HOM05D007389 ORTHO05D009400 1.1e-129 467.2 353 66.9
Gohir.D12G172800 Gossypium hirsutum HOM05D007389 ORTHO05D009400 2.5e-129 466.1 353 66.6
Gohir.A12G169500 Gossypium hirsutum HOM05D007389 ORTHO05D009400 3.2e-129 465.7 353 66.6
Nn4g23752 Nelumbo nucifera HOM05D007389 ORTHO05D009400 1.2e-128 463.8 339 69.9
Ciclev10031830m.g Citrus clementina HOM05D007389 ORTHO05D009400 1.6e-128 463.4 355 66.5
FvH4_4g27970 Fragaria vesca HOM05D007389 ORTHO05D009400 3.6e-128 462.2 353 67.1
FAN17G2097 Fragaria x ananassa HOM05D007389 ORTHO05D009400 4.6e-128 461.8 353 67.4
TWI31G0236 Tripterygium wilfordii HOM05D007389 ORTHO05D009400 6.1e-128 461.5 354 65.8
SEGI_35624 Sequoiadendron giganteum HOM05D007389 ORTHO05D009400 1.3e-127 460.3 353 65.7
vmacro10536 Vaccinium macrocarpon HOM05D007389 ORTHO05D009400 1.1e-126 457.2 340 69.7
Manes.06G071400 Manihot esculenta HOM05D007389 ORTHO05D009400 2.5e-126 456.1 355 65.1
COL.COLO4_07880 Corchorus olitorius HOM05D007389 ORTHO05D009400 7.4e-126 454.5 347 66.3
MD13G1045500 Malus domestica HOM05D007389 ORTHO05D009400 7.4e-126 454.5 352 65.9
Potri.010G128700 Populus trichocarpa HOM05D007389 ORTHO05D009400 1.4e-124 450.3 354 65.3
PGR102G2947 Punica granatum HOM05D007389 ORTHO05D009400 1.9e-121 439.9 355 62.5
Sabra10G0097900 Salix brachista HOM05D007389 ORTHO05D009400 2.1e-120 436.4 354 63.8
ATR0681G192 Amborella trichopoda HOM05D007389 ORTHO05D009400 1.8e-119 433.3 339 64.9
Phvul.003G028200 Phaseolus vulgaris HOM05D007389 ORTHO05D009400 3.0e-119 432.6 356 60.4
Cc11_g10500 Coffea canephora HOM05D007389 ORTHO05D009400 5.7e-118 428.3 354 61.3
VMungo1215G1613 Vigna mungo HOM05D007389 ORTHO05D009400 7.4e-118 427.9 356 59.6
CsaV3_5G034040 Cucumis sativus L. HOM05D007389 ORTHO05D009400 1.7e-117 426.8 353 61.8
ClCG05G022970 Citrullus lanatus HOM05D007389 ORTHO05D009400 2.2e-117 426.4 353 61.5
FAN22G0259 Fragaria x ananassa HOM05D007389 ORTHO05D009400 9.1e-116 421.0 338 65.4
HanXRQChr16g0529211 Helianthus annuus HOM05D007389 ORTHO05D009400 1.5e-115 420.2 353 62.0
Nitab4.5_0014175g0010 Nicotiana tabacum HOM05D007389 ORTHO05D009400 3.4e-115 419.1 354 59.9
Lalb_Chr10g0099831 Lupinus albus HOM05D007389 ORTHO05D009400 5.9e-115 418.3 354 59.9
Sed0014526 Sechium edule HOM05D007389 ORTHO05D009400 2.9e-114 416.0 353 60.6
Glyma.02G098600 Glycine max HOM05D007389 ORTHO05D009400 6.5e-114 414.8 356 58.4
ECA234G1470 Erigeron canadensis HOM05D007389 ORTHO05D009400 8.5e-114 414.5 353 60.1
PGSC0003DMG400007468 Solanum tuberosum HOM05D007389 ORTHO05D009400 1.2e-112 410.6 354 59.6
MELO3C012220.2 Cucumis melo HOM05D007389 ORTHO05D009400 2.1e-112 409.8 366 59.0
Sopen04g002110 Solanum pennellii HOM05D007389 ORTHO05D009400 2.7e-112 409.5 354 59.9
Lj2g0025946 Lotus japonicus HOM05D007389 ORTHO05D009400 3.7e-109 399.1 359 59.6
SalBow8G0691 Salvia bowleyana HOM05D007389 ORTHO05D009400 3.7e-109 399.1 355 56.9
Lsat_1_v5_gn_4_20121 Lactuca sativa HOM05D007389 ORTHO05D009400 4.5e-107 392.1 356 56.7
Dinv21123 Davidia involucrata HOM05D007389 ORTHO05D009400 5.9e-107 391.7 268 77.6
Nitab4.5_0000280g0020 Nicotiana tabacum HOM05D007389 ORTHO05D009400 7.7e-107 391.3 354 57.6
Peaxi162Scf00086g00615 Petunia axillaris HOM05D007389 ORTHO05D009400 7.7e-107 391.3 355 58.0
Sc11g0003170 Simmondsia chinensis HOM05D007389 ORTHO05D009400 2.2e-106 389.8 353 57.5
Migut.E00312 Erythranthe guttata HOM05D007389 ORTHO05D009400 8.5e-106 387.9 352 56.8
Pp3c18_11800 Physcomitrium patens HOM05D007389 ORTHO05D009400 2.1e-104 383.3 353 55.2
QL01p044805 Quercus lobata HOM05D007389 ORTHO05D009400 1.2e-102 377.5 264 76.1
Lj3A1018T64 Lonicera japonica HOM05D007389 ORTHO05D009400 4.4e-102 375.6 339 60.5
Duzib268G0586 Durio zibethinus HOM05D007389 ORTHO05D009400 7.5e-102 374.8 293 65.9
Oeu042041.1 Olea europaea HOM05D007389 ORTHO05D009400 6.3e-101 371.7 293 64.5
AagrBONN_evm.TU.Sc2ySwM_228.4489 Anthoceros agrestis HOM05D007389 ORTHO05D009400 3.1e-100 369.4 355 53.8
Mapoly0108s0021 Marchantia polymorpha HOM05D007389 ORTHO05D009400 1.2e-99 367.5 358 52.8
Hund25095 Selenicereus undatus HOM05D007389 ORTHO05D009400 2.7e-96 356.3 342 54.7
AUR62035272 Chenopodium quinoa HOM05D007389 ORTHO05D009400 6.1e-96 355.1 353 54.1
PSO063G2802 Papaver somniferum HOM05D007389 ORTHO05D009400 8.0e-96 354.8 359 57.1
SGA_v2.0_scaffold124G33583 Striga asiatica HOM05D007389 ORTHO05D009400 4.0e-95 352.4 352 52.0
Cpa.g.sc1.212 Carica papaya HOM05D007389 ORTHO05D009400 2.6e-94 349.7 261 67.8
CDE08G0863 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 5.7e-94 348.6 355 50.4
Pp3c15_5000 Physcomitrium patens HOM05D007389 ORTHO05D009400 7.5e-94 348.2 380 49.7
CDE02G3618 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 9.8e-94 347.8 355 51.0
THA.LOC104825707 Tarenaya hassleriana HOM05D007389 ORTHO05D009400 8.3e-93 344.7 345 52.8
SMO361G0332 Selaginella moellendorffii HOM05D007389 ORTHO05D009400 7.0e-92 341.7 340 52.6
Sp1g11820 Schrenkiella parvula HOM05D007389 ORTHO05D009400 2.8e-85 319.7 355 49.6
BraA08t35158Z Brassica rapa HOM05D007389 ORTHO05D009400 4.9e-85 318.9 348 50.6
A08p32350 Brassica napus HOM05D007389 ORTHO05D009400 4.5e-83 312.4 348 50.0
Thhalv10009351m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 5.9e-83 312.0 344 50.6
C08p16080 Brassica napus HOM05D007389 ORTHO05D009400 1.7e-82 310.5 348 50.0
unitig_27.g25245 Utricularia gibba HOM05D007389 ORTHO05D009400 1.1e-81 307.8 337 47.5
BolC8t49230H Brassica oleracea HOM05D007389 ORTHO05D009400 3.3e-81 306.2 344 50.0
AagrBONN_evm.TU.Sc2ySwM_362.2055 Anthoceros agrestis HOM05D007389 ORTHO05D009400 8.0e-80 301.6 262 60.3
CARHR013690 Cardamine hirsuta HOM05D007389 ORTHO05D009400 1.8e-79 300.4 344 48.8
Actinidia14859 Actinidia chinensis HOM05D007389 ORTHO05D009400 3.0e-79 299.7 240 69.2
AT1G13310 Arabidopsis thaliana HOM05D007389 ORTHO05D009400 3.0e-74 283.1 344 46.5
HPP92_023813 Vanilla planifolia HOM05D007389 ORTHO05D009400 3.9e-74 282.7 355 46.8
Carub.0001s1304 Capsella rubella HOM05D007389 ORTHO05D009400 2.5e-73 280.0 344 46.2
EL10Ac6g14465 Beta vulgaris HOM05D007389 ORTHO05D009400 3.3e-73 279.6 449 39.6
AL1G25070 Arabidopsis lyrata HOM05D007389 ORTHO05D009400 1.8e-71 273.9 345 46.7
Aa31LG1G1460 Aethionema arabicum HOM05D007389 ORTHO05D009400 5.0e-66 255.8 344 45.1
HanXRQChr17g0567921 Helianthus annuus HOM05D007389 ORTHO05D009400 1.9e-65 253.8 233 58.4
Thhalv10023040m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 6.4e-61 238.8 366 42.1
AUR62002912 Chenopodium quinoa HOM05D007389 ORTHO05D009400 2.5e-57 226.9 353 39.7
BcaC06g31117 Brassica carinata HOM05D007389 ORTHO05D009400 3.2e-52 209.9 367 37.6
CBR_g39725 Chara braunii HOM05D001740 ORTHO05D001468 3.5e-51 206.5 245 48.6
A06p42500 Brassica napus HOM05D001825 ORTHO05D002336 3.3e-49 199.9 364 36.8
BraA06t27163Z Brassica rapa HOM05D001825 ORTHO05D002336 8.1e-48 195.3 352 36.6
Duzib251G0237 Durio zibethinus HOM05D007389 ORTHO05D009400 1.1e-41 174.9 142 62.0
FAN12G3113 Fragaria x ananassa HOM05D007389 ORTHO05D009400 4.3e-41 172.9 133 66.2
TAR629G0747 Trochodendron aralioides HOM05D007389 ORTHO05D009400 2.1e-40 170.6 151 68.2
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 1.8e-39 167.5 197 49.2
BolC7t44001H Brassica oleracea HOM05D001825 ORTHO05D002336 1.4e-36 157.9 325 35.1
PSO782G3111 Papaver somniferum HOM05D007389 ORTHO05D009400 4.6e-35 152.9 146 52.7
BcaC06g33956 Brassica carinata HOM05D007389 ORTHO05D009400 3.0e-34 150.2 323 34.7
C07p34700 Brassica napus HOM05D001825 ORTHO05D002336 6.7e-34 149.1 291 36.1
QL01p044810 Quercus lobata HOM05D007389 ORTHO05D009400 3.3e-33 146.7 91 73.6
Nitab4.5_0000280g0130 Nicotiana tabacum HOM05D007389 ORTHO05D009400 1.1e-28 131.7 152 48.7
TAR573G0003 Trochodendron aralioides HOM05D007389 ORTHO05D009400 2.4e-28 130.6 114 67.5
Lalb_Chr04g0254881 Lupinus albus HOM05D007389 ORTHO05D009400 9.0e-23 112.1 90 52.2
SalBow8G3870 Salvia bowleyana HOM05D007389 ORTHO05D009400 4.5e-22 109.8 100 54.0
MCO11G211 Micromonas commoda HOM05D007389 ORTHO05D009400 1.9e-20 104.4 399 25.8
TAR623G1215 Trochodendron aralioides HOM05D005087 ORTHO05D006427 9.1e-07 58.9 49 69.4


User provided reference genes

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