Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0491 Trochodendron aralioides HOM05D007358 ORTHO05D009117 4.6e-27 126.3 59 100.0
C04p47210 Brassica napus HOM05D007358 ORTHO05D009117 1.1e-09 68.6 38 73.7
BolC4t26320H Brassica oleracea HOM05D007358 ORTHO05D009117 1.1e-09 68.6 38 73.7
BraA04t17002Z Brassica rapa HOM05D007358 ORTHO05D009117 1.1e-09 68.6 38 73.7
A04p13440 Brassica napus HOM05D007358 ORTHO05D009117 3.3e-09 67.0 38 71.1
CARHR261620 Cardamine hirsuta HOM05D007358 ORTHO05D009117 3.3e-09 67.0 38 71.1
Hma1.2p1_0013F.1_g008840 Hydrangea macrophylla HOM05D007358 ORTHO05D009117 1.6e-08 64.7 45 60.0
Potri.017G071600 Populus trichocarpa HOM05D007358 ORTHO05D009117 3.6e-08 63.5 42 64.3
Hma1.2p1_0013F.1_g008830 Hydrangea macrophylla HOM05D007358 ORTHO05D009117 4.7e-08 63.2 42 61.9
HPP92_024516 Vanilla planifolia HOM05D044601 ORTHO05D009117 1.1e-07 62.0 55 54.5
MBI17_g07976_MAGBIO Magnolia biondii HOM05D007358 ORTHO05D009117 1.4e-07 61.6 36 80.6
Sabra17G0060800 Salix brachista HOM05D007358 ORTHO05D009117 5.2e-07 59.7 42 57.1
Cpa.g.sc108.57 Carica papaya HOM05D007358 ORTHO05D009117 1.2e-06 58.5 44 61.4
Migut.F01873 Erythranthe guttata HOM05D007358 ORTHO05D009117 2.6e-06 57.4 45 51.1
TWI12G0702 Tripterygium wilfordii HOM05D007358 ORTHO05D009117 2.6e-06 57.4 47 55.3
CSS0028376 Camellia sinensis var. sinensis HOM05D007358 ORTHO05D009117 4.4e-06 56.6 45 53.3
MSTRG.8212 Avicennia marina HOM05D007358 ORTHO05D009117 5.8e-06 56.2 53 47.2
CiPaw.03G042400 Carya illinoinensis HOM05D007358 ORTHO05D009117 5.8e-06 56.2 45 48.9
ATR1127G166 Amborella trichopoda HOM05D007358 ORTHO05D009117 7.6e-06 55.8 36 66.7
COL.COLO4_29095 Corchorus olitorius HOM05D007358 ORTHO05D009117 7.6e-06 55.8 53 52.8
Atru.BG.30.p Acer truncatum HOM05D007358 ORTHO05D009117 9.9e-06 55.5 45 53.3
SGA_v2.0_scaffold122G33180 Striga asiatica HOM05D007358 ORTHO05D009117 9.9e-06 55.5 45 51.1


User provided reference genes

Program Settings