Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0473 Trochodendron aralioides HOM05D008280 ORTHO05D010492 4.4e-92 341.3 171 100.0
Nn1g10160 Nelumbo nucifera HOM05D008280 ORTHO05D010492 3.6e-62 241.9 158 81.6
DCAR_032445 Daucus carota HOM05D008280 ORTHO05D010492 4.4e-60 235.0 158 79.7
RcHm_v2.0_MTg0498291 Rosa chinensis HOM05D008280 ORTHO05D010492 5.8e-60 234.6 158 79.1
ATMG00110 Arabidopsis thaliana HOM05D008280 ORTHO05D010492 1.3e-59 233.4 158 79.1
BNapus_Darmor_BZH_scaffold_234p00070 Brassica napus HOM05D008280 ORTHO05D010492 1.3e-59 233.4 158 79.1
BolSC28t60354H Brassica oleracea HOM05D008280 ORTHO05D010492 1.3e-59 233.4 158 79.1
BraSC159t45719Z Brassica rapa HOM05D008280 ORTHO05D010492 1.3e-59 233.4 158 79.1
BraSC77t46666Z Brassica rapa HOM05D008280 ORTHO05D010492 1.3e-59 233.4 158 79.1
CARHR282640 Cardamine hirsuta HOM05D008280 ORTHO05D010492 1.3e-59 233.4 158 79.1
Sp3g25740 Schrenkiella parvula HOM05D008280 ORTHO05D010492 1.3e-59 233.4 158 79.1
CAN.G1126.5 Capsicum annuum HOM05D008280 ORTHO05D010492 2.2e-59 232.6 158 79.7
CAN.G1159.15 Capsicum annuum HOM05D008280 ORTHO05D010492 2.2e-59 232.6 158 79.7
CAN.G266.10 Capsicum annuum HOM05D008280 ORTHO05D010492 2.2e-59 232.6 158 79.7
Sed0015016 Sechium edule HOM05D008280 ORTHO05D010492 2.2e-59 232.6 158 79.1
Solyc00g020040.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 2.2e-59 232.6 158 79.7
Lj2P1227T101 Lonicera japonica HOM05D008280 ORTHO05D010492 1.1e-58 230.3 158 79.1
SalBow1G8376 Salvia bowleyana HOM05D008280 ORTHO05D010492 3.2e-58 228.8 158 78.5
Nitab4.5_0001796g0300 Nicotiana tabacum HOM05D008280 ORTHO05D010492 5.4e-58 228.0 158 78.5
CAN.G72.16 Capsicum annuum HOM05D008280 ORTHO05D010492 9.2e-58 227.3 158 77.8
Lalb_Chr00c29g0408141 Lupinus albus HOM05D008280 ORTHO05D010492 1.2e-57 226.9 158 75.9
BraSC48t46257Z Brassica rapa HOM05D008280 ORTHO05D010492 2.1e-57 226.1 146 80.8
HanXRQMTg0579251 Helianthus annuus HOM05D008280 ORTHO05D010492 2.7e-57 225.7 158 78.5
arahy.Tifrunner.gnm1.ann1.TAQ3SD Arachis hypogaea HOM05D008280 ORTHO05D010492 6.0e-57 224.6 158 75.9
arahy.Tifrunner.gnm1.ann1.9X0QWA Arachis hypogaea HOM05D008280 ORTHO05D010492 1.0e-56 223.8 158 75.9
arahy.Tifrunner.gnm1.ann1.U3KMBF Arachis hypogaea HOM05D008280 ORTHO05D010492 1.0e-56 223.8 158 75.9
Lj5g0023723 Lotus japonicus HOM05D008280 ORTHO05D010492 1.9e-55 219.5 157 75.8
LjContig00315g0024501 Lotus japonicus HOM05D008280 ORTHO05D010492 1.9e-55 219.5 157 75.8
Lsat_1_v5_gn_7_99841 Lactuca sativa HOM05D008280 ORTHO05D010492 5.6e-55 218.0 158 76.6
Medtr0141s0020 Medicago truncatula HOM05D008280 ORTHO05D010492 1.6e-54 216.5 158 74.7
TPR.G21718 Trifolium pratense HOM05D008280 ORTHO05D010492 2.8e-54 215.7 158 74.1
MBI05_g23314_MAGBIO Magnolia biondii HOM05D008280 ORTHO05D010492 4.7e-54 214.9 157 73.9
CANSAT16G0019 Cannabis sativa HOM05D008280 ORTHO05D010492 2.3e-53 212.6 158 75.9
Nitab4.5_0009703g0040 Nicotiana tabacum HOM05D008280 ORTHO05D010492 1.2e-52 210.3 141 78.7
Potri.007G061721 Populus trichocarpa HOM05D008280 ORTHO05D010492 1.4e-50 203.4 157 74.5
CAN.G362.37 Capsicum annuum HOM05D008280 ORTHO05D010492 2.4e-50 202.6 157 71.3
Eucgr.E02151 Eucalyptus grandis HOM05D008280 ORTHO05D010492 6.6e-48 194.5 127 81.1
Solyc11g028160.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 2.1e-46 189.5 141 72.3
Nitab4.5_0004471g0100 Nicotiana tabacum HOM05D008280 ORTHO05D010492 8.4e-43 177.6 127 74.8
CAN.G21.55 Capsicum annuum HOM05D008280 ORTHO05D010492 4.2e-42 175.3 114 80.7
Medtr0094s0120 Medicago truncatula HOM05D008280 ORTHO05D010492 9.3e-42 174.1 132 71.2
Sed0028122 Sechium edule HOM05D008280 ORTHO05D010492 1.1e-37 160.6 158 60.8
unitig_87.g27971 Utricularia gibba HOM05D008280 ORTHO05D010492 1.7e-32 143.3 99 77.8
CAN.G676.27 Capsicum annuum HOM05D008280 ORTHO05D010492 7.3e-31 137.9 105 70.5
Lsat_1_v5_gn_7_96601 Lactuca sativa HOM05D008280 ORTHO05D010492 2.1e-30 136.3 99 75.8
SHI07395 Sapria himalayana HOM05D008280 ORTHO05D010492 3.6e-30 135.6 105 69.5
Nitab4.5_0000978g0030 Nicotiana tabacum HOM05D008280 ORTHO05D010492 3.4e-28 129.0 86 77.9
Nn7g37645 Nelumbo nucifera HOM05D008280 ORTHO05D010492 9.9e-28 127.5 83 80.7
HanXRQChr05g0151451 Helianthus annuus HOM05D008280 ORTHO05D010492 3.9e-24 115.5 80 77.5
Psat1g132520 Pisum sativum HOM05D008280 ORTHO05D010492 8.7e-24 114.4 87 72.4
MBI09_g03548_MAGBIO Magnolia biondii HOM05D008280 ORTHO05D010492 1.9e-23 113.2 74 79.7
HanXRQChr03g0087181 Helianthus annuus HOM05D008280 ORTHO05D010492 1.3e-22 110.5 99 65.7
Ca_30339_v3 Cicer arietinum L. HOM05D008280 ORTHO05D010492 1.3e-19 100.5 140 47.1
Lj2C1224T22 Lonicera japonica HOM05D008280 ORTHO05D010492 1.9e-18 96.7 59 83.1
VMungo0985G0011 Vigna mungo HOM05D008696 ORTHO05D002807 4.2e-18 95.5 64 76.6
Gohir.A13G092605 Gossypium hirsutum HOM05D008280 ORTHO05D010492 1.1e-15 87.4 67 73.1
QL08p039717 Quercus lobata HOM05D008280 ORTHO05D010492 1.4e-10 70.5 57 63.2
SHI01507 Sapria himalayana HOM05D008280 ORTHO05D010492 2.5e-07 59.7 108 36.1


User provided reference genes

Program Settings