Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0469 Trochodendron aralioides HOM05D000922 ORTHO05D008200 3.1e-69 265.0 133 100.0
Nn3g16820 Nelumbo nucifera HOM05D000922 ORTHO05D008200 6.1e-57 224.2 135 83.7
TAR629G0323 Trochodendron aralioides HOM05D000922 ORTHO05D008200 1.4e-56 223.0 135 85.9
Dinv20636 Davidia involucrata HOM05D000922 ORTHO05D008200 3.7e-54 214.9 134 82.8
Manes.05G195400 Manihot esculenta HOM05D000922 ORTHO05D008200 1.2e-52 209.9 132 79.5
Sabra15G0103100 Salix brachista HOM05D000922 ORTHO05D008200 2.0e-52 209.1 132 81.1
Manes.14G064200 Manihot esculenta HOM05D000922 ORTHO05D008200 3.4e-52 208.4 130 80.8
Eucgr.G00068 Eucalyptus grandis HOM05D000922 ORTHO05D008200 4.5e-52 208.0 135 78.5
DCAR_026150 Daucus carota HOM05D000922 ORTHO05D008200 1.0e-51 206.8 133 78.2
AUR62010095 Chenopodium quinoa HOM05D000922 ORTHO05D008200 1.7e-51 206.1 135 74.1
COL.COLO4_30070 Corchorus olitorius HOM05D000922 ORTHO05D008200 1.7e-51 206.1 134 79.1
Aqoxy3G02881 Aquilegia oxysepala HOM05D000922 ORTHO05D008200 3.8e-51 204.9 133 75.9
CSS0000249 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D008200 3.8e-51 204.9 135 78.5
Lsat_1_v5_gn_5_15061 Lactuca sativa HOM05D000922 ORTHO05D008200 3.8e-51 204.9 133 76.7
Lalb_Chr12g0201661 Lupinus albus HOM05D000922 ORTHO05D008200 3.8e-51 204.9 134 77.6
Gohir.D09G167000 Gossypium hirsutum HOM05D000922 ORTHO05D008200 5.0e-51 204.5 134 77.6
Gorai.006G188800 Gossypium raimondii HOM05D000922 ORTHO05D008200 5.0e-51 204.5 134 77.6
Hund09449 Selenicereus undatus HOM05D000922 ORTHO05D008200 5.0e-51 204.5 135 76.3
Duzib205G0455 Durio zibethinus HOM05D000922 ORTHO05D008200 6.5e-51 204.1 134 79.1
Atru.chr9.2496 Acer truncatum HOM05D000922 ORTHO05D008200 1.1e-50 203.4 135 75.6
Gohir.A09G171300 Gossypium hirsutum HOM05D000922 ORTHO05D008200 1.1e-50 203.4 134 76.9
AUR62013091 Chenopodium quinoa HOM05D000922 ORTHO05D008200 1.4e-50 203.0 135 72.6
Prupe.5G171600 Prunus persica HOM05D000922 ORTHO05D008200 1.4e-50 203.0 134 78.4
arahy.Tifrunner.gnm1.ann1.RA2V7W Arachis hypogaea HOM05D000922 ORTHO05D008200 1.9e-50 202.6 134 76.9
CiPaw.11G024500 Carya illinoinensis HOM05D000922 ORTHO05D008200 3.2e-50 201.8 135 77.0
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 4.2e-50 201.4 132 80.3
MD14G1178100 Malus domestica HOM05D000922 ORTHO05D008200 4.2e-50 201.4 134 77.6
Potri.015G078600 Populus trichocarpa HOM05D000922 ORTHO05D008200 4.2e-50 201.4 132 78.8
ECA246G4361 Erigeron canadensis HOM05D000922 ORTHO05D008200 5.5e-50 201.1 133 75.9
Ciclev10022297m.g Citrus clementina HOM05D000922 ORTHO05D008200 7.2e-50 200.7 132 77.3
Solyc03g112810.3 Solanum lycopersicum HOM05D000922 ORTHO05D008200 7.2e-50 200.7 132 76.5
GSVIVG01007722001 Vitis vinifera HOM05D000922 ORTHO05D008200 7.2e-50 200.7 135 76.3
CAN.G1166.6 Capsicum annuum HOM05D000922 ORTHO05D008200 9.4e-50 200.3 132 76.5
ClCG01G013230 Citrullus lanatus HOM05D000922 ORTHO05D008200 9.4e-50 200.3 136 77.2
Sed0005243 Sechium edule HOM05D000922 ORTHO05D008200 1.2e-49 199.9 134 76.9
Cc04_g12150 Coffea canephora HOM05D000922 ORTHO05D008200 1.6e-49 199.5 135 75.6
Glyma.17G088100 Glycine max HOM05D000922 ORTHO05D008200 2.1e-49 199.1 134 76.9
Medtr4g105570 Medicago truncatula HOM05D000922 ORTHO05D008200 2.1e-49 199.1 132 75.0
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 2.1e-49 199.1 134 77.6
Sopen03g031890 Solanum pennellii HOM05D000922 ORTHO05D008200 2.1e-49 199.1 132 75.8
Thecc.03G014600 Theobroma cacao HOM05D000922 ORTHO05D008200 2.1e-49 199.1 134 76.9
vmacro19401 Vaccinium macrocarpon HOM05D000922 ORTHO05D008200 2.1e-49 199.1 135 77.8
MSTRG.11466 Avicennia marina HOM05D000922 ORTHO05D008200 2.7e-49 198.7 135 72.6
MELO3C002273.2 Cucumis melo HOM05D000922 ORTHO05D008200 3.6e-49 198.4 136 75.0
CsaV3_1G008590 Cucumis sativus L. HOM05D000922 ORTHO05D008200 3.6e-49 198.4 136 75.7
Nitab4.5_0000514g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 3.6e-49 198.4 133 75.9
Nitab4.5_0008678g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 3.6e-49 198.4 133 75.9
arahy.Tifrunner.gnm1.ann1.HJA5XH Arachis hypogaea HOM05D000922 ORTHO05D008200 4.7e-49 198.0 134 75.4
EL10Ac9g21439 Beta vulgaris HOM05D000922 ORTHO05D008200 6.1e-49 197.6 129 75.2
PGSC0003DMG400018154 Solanum tuberosum HOM05D000922 ORTHO05D008200 6.1e-49 197.6 132 75.8
QL10p010977 Quercus lobata HOM05D000922 ORTHO05D008200 1.8e-48 196.1 132 75.0
THA.LOC104818216 Tarenaya hassleriana HOM05D000922 ORTHO05D008200 1.8e-48 196.1 130 76.2
TWI39G0231 Tripterygium wilfordii HOM05D000922 ORTHO05D008200 2.3e-48 195.7 133 76.7
Lj4g0019609 Lotus japonicus HOM05D000922 ORTHO05D008200 3.0e-48 195.3 135 74.1
Psat4g058400 Pisum sativum HOM05D000922 ORTHO05D008200 3.0e-48 195.3 133 73.7
arahy.Tifrunner.gnm1.ann1.UWQ2W3 Arachis hypogaea HOM05D000922 ORTHO05D008200 5.1e-48 194.5 134 73.9
Lj5C125T23 Lonicera japonica HOM05D000922 ORTHO05D008200 5.1e-48 194.5 135 75.6
VMungo1215G1163 Vigna mungo HOM05D000922 ORTHO05D008200 8.8e-48 193.7 133 75.2
CANSAT80G0818 Cannabis sativa HOM05D000922 ORTHO05D008200 1.1e-47 193.4 133 70.7
Haze_07527 Corylus avellana HOM05D000922 ORTHO05D008200 1.1e-47 193.4 133 75.9
Phvul.003G201800 Phaseolus vulgaris HOM05D000922 ORTHO05D008200 2.0e-47 192.6 133 73.7
RcHm_v2.0_Chr7g0193351 Rosa chinensis HOM05D000922 ORTHO05D008200 2.0e-47 192.6 134 73.1
MD06G1172200 Malus domestica HOM05D000922 ORTHO05D008200 2.6e-47 192.2 134 74.6
Ca_21935_v3 Cicer arietinum L. HOM05D000922 ORTHO05D008200 4.4e-47 191.4 134 72.4
HanXRQChr05g0155781 Helianthus annuus HOM05D000922 ORTHO05D008200 5.7e-47 191.0 129 72.9
PSO832G1073 Papaver somniferum HOM05D000922 ORTHO05D008200 1.3e-46 189.9 134 71.6
Peaxi162Scf00089g01850 Petunia axillaris HOM05D000922 ORTHO05D008200 2.8e-46 188.7 134 73.9
FAN13G3248 Fragaria x ananassa HOM05D000922 ORTHO05D008200 3.7e-46 188.3 133 72.2
arahy.Tifrunner.gnm1.ann1.R1G0J4 Arachis hypogaea HOM05D000922 ORTHO05D008200 6.3e-46 187.6 141 70.2
FAN04G0130 Fragaria x ananassa HOM05D000922 ORTHO05D008200 6.3e-46 187.6 133 71.4
SalBow1G6106 Salvia bowleyana HOM05D000922 ORTHO05D008200 6.3e-46 187.6 132 71.2
SalBow5G5253 Salvia bowleyana HOM05D000922 ORTHO05D008200 6.3e-46 187.6 132 71.2
ATR1091G108 Amborella trichopoda HOM05D000922 ORTHO05D008200 2.4e-45 185.7 134 70.9
arahy.Tifrunner.gnm1.ann1.3C9G4H Arachis hypogaea HOM05D000922 ORTHO05D008200 3.1e-45 185.3 130 73.8
Migut.O00114 Erythranthe guttata HOM05D000922 ORTHO05D008200 3.1e-45 185.3 124 72.6
HPP92_011872 Vanilla planifolia HOM05D000922 ORTHO05D008200 4.1e-45 184.9 133 70.7
CARHR276810 Cardamine hirsuta HOM05D000922 ORTHO05D008200 5.3e-45 184.5 133 71.4
FvH4_5g05480 Fragaria vesca HOM05D000922 ORTHO05D008200 5.3e-45 184.5 133 70.7
FAN18G2418 Fragaria x ananassa HOM05D000922 ORTHO05D008200 7.0e-45 184.1 133 70.7
FAN18G3465 Fragaria x ananassa HOM05D000922 ORTHO05D008200 7.0e-45 184.1 133 70.7
BcaB02g09714 Brassica carinata HOM05D000922 ORTHO05D008200 9.1e-45 183.7 133 68.4
Thhalv10004944m.g Eutrema salsugineum HOM05D000922 ORTHO05D008200 9.1e-45 183.7 133 70.7
AL8G40030 Arabidopsis lyrata HOM05D000922 ORTHO05D008200 1.2e-44 183.3 133 70.7
AT5G63000 Arabidopsis thaliana HOM05D000922 ORTHO05D008200 1.2e-44 183.3 133 70.7
Carub.0008s2371 Capsella rubella HOM05D000922 ORTHO05D008200 2.6e-44 182.2 133 69.2
CDE07G1875 Ceratophyllum demersum HOM05D000922 ORTHO05D008200 3.5e-44 181.8 105 83.8
Aa31LG4G16810 Aethionema arabicum HOM05D002875 ORTHO05D003215 4.5e-44 181.4 133 69.9
unitig_0.g1435 Utricularia gibba HOM05D000922 ORTHO05D008200 5.9e-44 181.0 132 68.2
BcaC01g02547 Brassica carinata HOM05D000922 ORTHO05D008200 1.0e-43 180.3 133 68.4
C03p63610 Brassica napus HOM05D000922 ORTHO05D008200 1.0e-43 180.3 133 68.4
BolC3t18619H Brassica oleracea HOM05D000922 ORTHO05D008200 1.0e-43 180.3 133 68.4
Sp2g26130 Schrenkiella parvula HOM05D000922 ORTHO05D008200 1.0e-43 180.3 133 68.4
PGR044G1577 Punica granatum HOM05D000922 ORTHO05D008200 1.3e-43 179.9 135 69.6
Zm00001eb332970 Zea mays HOM05D000922 ORTHO05D008200 1.7e-43 179.5 137 65.0
A06p29780 Brassica napus HOM05D000922 ORTHO05D008200 2.2e-43 179.1 133 68.4
BraA06t25925Z Brassica rapa HOM05D000922 ORTHO05D008200 2.2e-43 179.1 133 68.4
SGA_v2.0_scaffold90G27896 Striga asiatica HOM05D000922 ORTHO05D008200 2.2e-43 179.1 102 85.3
Os01g0271000 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D008200 1.6e-41 172.9 136 65.4
FAN08G1692 Fragaria x ananassa HOM05D000922 ORTHO05D008200 6.1e-41 171.0 154 61.7
MBI16_g39217_MAGBIO Magnolia biondii HOM05D000922 ORTHO05D008200 3.9e-40 168.3 156 60.3
PGR044G0925 Punica granatum HOM05D000922 ORTHO05D008200 3.9e-40 168.3 135 64.4
Sc04g0001730 Simmondsia chinensis HOM05D000922 ORTHO05D008200 1.1e-37 160.2 90 85.6
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 1.8e-37 159.5 245 43.3
Oeu023435.1 Olea europaea HOM05D000922 ORTHO05D008200 1.0e-35 153.7 90 82.2
SEGI_40590 Sequoiadendron giganteum HOM05D000922 ORTHO05D008200 1.9e-34 149.4 137 57.7
SHI38067 Sapria himalayana HOM05D000922 ORTHO05D008200 2.5e-34 149.1 130 60.8
Glyma.05G038900 Glycine max HOM05D000922 ORTHO05D008200 4.1e-29 131.7 78 82.1
arahy.Tifrunner.gnm1.ann1.Q2CJ89 Arachis hypogaea HOM05D000922 ORTHO05D008200 4.5e-28 128.3 134 55.2
TPR.G11031 Trifolium pratense HOM05D000922 ORTHO05D008200 1.7e-27 126.3 92 69.6
arahy.Tifrunner.gnm1.ann1.JAVP2G Arachis hypogaea HOM05D000922 ORTHO05D008200 1.3e-22 110.2 134 48.5
Cfa019117 Carpinus fangiana HOM05D000922 ORTHO05D008200 1.7e-22 109.8 63 87.3
Mapoly0191s0008 Marchantia polymorpha HOM05D000922 ORTHO05D008200 1.4e-21 106.7 101 53.5
arahy.Tifrunner.gnm1.ann1.PQAW0Q Arachis hypogaea HOM05D000922 ORTHO05D008200 3.5e-20 102.1 62 79.0
TPR.G37467 Trifolium pratense HOM05D000922 ORTHO05D008200 3.5e-20 102.1 62 79.0
EL10Ac5g12019 Beta vulgaris HOM05D000922 ORTHO05D008200 1.5e-18 96.7 64 71.9
AagrBONN_evm.TU.Sc2ySwM_228.4800 Anthoceros agrestis HOM05D000922 ORTHO05D008200 5.5e-18 94.7 98 45.9
CBR_g38960 Chara braunii HOM05D000922 ORTHO05D008200 7.2e-18 94.4 129 42.6
Peaxi162Scf00089g01839 Petunia axillaris HOM05D000922 ORTHO05D008200 3.6e-17 92.0 113 46.9
SMO111G0048 Selaginella moellendorffii HOM05D000922 ORTHO05D008200 1.8e-16 89.7 89 50.6
Pp3c17_17380 Physcomitrium patens HOM05D000922 ORTHO05D008200 2.4e-13 79.3 127 32.3
Cpa.g.sc76.32 Carica papaya HOM05D000922 ORTHO05D008200 1.6e-12 76.6 108 41.7
MCO04G383 Micromonas commoda HOM05D000922 ORTHO05D008200 1.2e-07 60.5 75 38.7
Medtr4g105580 Medicago truncatula HOM05D000922 ORTHO05D008200 5.8e-07 58.2 71 43.7


User provided reference genes

Program Settings