Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0439 Trochodendron aralioides HOM05D005729 ORTHO05D007026 2.8e-92 342.0 189 100.0
TAR629G2671 Trochodendron aralioides HOM05D005729 ORTHO05D007026 1.5e-64 250.0 192 78.6
TAR628G1373 Trochodendron aralioides HOM05D005729 ORTHO05D007026 3.6e-63 245.4 192 78.1
Nn4g22156 Nelumbo nucifera HOM05D005729 ORTHO05D007026 4.4e-61 238.4 179 77.7
Aqoxy5G03273 Aquilegia oxysepala HOM05D005729 ORTHO05D007026 1.3e-60 236.9 193 73.1
Dinv33283 Davidia involucrata HOM05D005729 ORTHO05D007026 1.4e-59 233.4 202 70.3
Aqoxy5G03167 Aquilegia oxysepala HOM05D005729 ORTHO05D007026 5.1e-57 224.9 192 71.9
Manes.04G092600 Manihot esculenta HOM05D005729 ORTHO05D007026 5.6e-56 221.5 189 64.0
Glyma.19G102200 Glycine max HOM05D005729 ORTHO05D007026 2.8e-55 219.2 190 67.4
Actinidia19554 Actinidia chinensis HOM05D005729 ORTHO05D007026 3.6e-55 218.8 196 67.3
Phvul.001G085400 Phaseolus vulgaris HOM05D005729 ORTHO05D007026 4.7e-55 218.4 191 68.1
ClCG01G007820 Citrullus lanatus HOM05D005729 ORTHO05D007026 2.3e-54 216.1 193 65.3
Cpa.g.sc9.286 Carica papaya HOM05D005729 ORTHO05D007026 5.2e-54 214.9 197 67.5
CANSAT64G2014 Cannabis sativa HOM05D005729 ORTHO05D007026 5.8e-53 211.5 189 68.3
CiPaw.03G002600 Carya illinoinensis HOM05D005729 ORTHO05D007026 5.8e-53 211.5 189 67.7
Glyma.16G049200 Glycine max HOM05D005729 ORTHO05D007026 7.5e-53 211.1 193 66.8
PGR142G3540 Punica granatum HOM05D005729 ORTHO05D007026 1.7e-52 209.9 196 60.7
MBI07_g07331_MAGBIO Magnolia biondii HOM05D005729 ORTHO05D007026 2.2e-52 209.5 191 68.6
MELO3C005111.2 Cucumis melo HOM05D005729 ORTHO05D007026 2.9e-52 209.1 193 66.3
CsaV3_5G024890 Cucumis sativus L. HOM05D005729 ORTHO05D007026 2.9e-52 209.1 193 66.3
ATR0559G324 Amborella trichopoda HOM05D005729 ORTHO05D007026 2.4e-51 206.1 196 66.8
arahy.Tifrunner.gnm1.ann1.33W0XH Arachis hypogaea HOM05D005729 ORTHO05D007026 5.4e-51 204.9 202 62.4
Prupe.2G125900 Prunus persica HOM05D005729 ORTHO05D007026 9.2e-51 204.1 195 65.6
Sed0006238 Sechium edule HOM05D005729 ORTHO05D007026 9.2e-51 204.1 193 63.7
Lalb_Chr22g0359961 Lupinus albus HOM05D005729 ORTHO05D007026 2.7e-50 202.6 200 64.5
Duzib187G1006 Durio zibethinus HOM05D005729 ORTHO05D007026 3.5e-50 202.2 192 65.6
Solyc02g094490.4 Solanum lycopersicum HOM05D005729 ORTHO05D007026 4.6e-50 201.8 187 66.3
CSS0020873 Camellia sinensis var. sinensis HOM05D005729 ORTHO05D007026 1.7e-49 199.9 196 64.3
MD00G1041400 Malus domestica HOM05D005729 ORTHO05D007026 1.5e-48 196.8 191 63.9
Thecc.04G047000 Theobroma cacao HOM05D005729 ORTHO05D007026 1.9e-48 196.4 196 64.8
Oeu003419.1 Olea europaea HOM05D005729 ORTHO05D007026 4.3e-48 195.3 200 65.0
Sed0018343 Sechium edule HOM05D005729 ORTHO05D007026 5.6e-48 194.9 186 65.6
MD05G1139400 Malus domestica HOM05D005729 ORTHO05D007026 9.5e-48 194.1 191 63.4
RcHm_v2.0_Chr5g0049531 Rosa chinensis HOM05D005729 ORTHO05D007026 9.5e-48 194.1 187 62.6
SalBow7G1413 Salvia bowleyana HOM05D005729 ORTHO05D007026 2.1e-47 193.0 192 65.1
unitig_92.g28207 Utricularia gibba HOM05D005729 ORTHO05D007026 2.8e-47 192.6 195 64.6
Potri.014G145600 Populus trichocarpa HOM05D005729 ORTHO05D007026 4.7e-47 191.8 191 59.7
FAN22G1114 Fragaria x ananassa HOM05D005729 ORTHO05D007026 6.2e-47 191.4 188 61.7
FAN17G0918 Fragaria x ananassa HOM05D005729 ORTHO05D007026 8.1e-47 191.0 188 61.7
Medtr7g083930 Medicago truncatula HOM05D005729 ORTHO05D007026 8.1e-47 191.0 195 63.6
TPR.G10334 Trifolium pratense HOM05D005729 ORTHO05D007026 8.1e-47 191.0 191 64.9
Zm00001eb183750 Zea mays HOM05D005729 ORTHO05D007026 8.1e-47 191.0 189 58.2
FvH4_4g34010 Fragaria vesca HOM05D005729 ORTHO05D007026 1.1e-46 190.7 188 61.2
QL11p027744 Quercus lobata HOM05D005729 ORTHO05D007026 1.1e-46 190.7 193 65.3
FAN12G1178 Fragaria x ananassa HOM05D005729 ORTHO05D007026 4.0e-46 188.7 188 60.6
Eucgr.G01937 Eucalyptus grandis HOM05D005729 ORTHO05D007026 6.8e-46 188.0 193 61.7
DCAR_014472 Daucus carota HOM05D005729 ORTHO05D007026 1.2e-45 187.2 197 61.4
Potri.002G237000 Populus trichocarpa HOM05D005729 ORTHO05D007026 1.2e-45 187.2 193 62.2
Thhalv10017252m.g Eutrema salsugineum HOM05D005729 ORTHO05D007026 1.5e-45 186.8 193 62.2
Lj1g0015500 Lotus japonicus HOM05D005729 ORTHO05D007026 2.0e-45 186.4 190 63.2
CARHR125040 Cardamine hirsuta HOM05D005729 ORTHO05D007026 2.6e-45 186.0 193 62.2
FAN21G1155 Fragaria x ananassa HOM05D005729 ORTHO05D007026 2.6e-45 186.0 188 62.8
Dinv25620 Davidia involucrata HOM05D000884 ORTHO05D002127 5.8e-45 184.9 191 65.4
Lsat_1_v5_gn_2_94961 Lactuca sativa HOM05D005729 ORTHO05D007026 5.8e-45 184.9 182 66.5
Psat3g093680 Pisum sativum HOM05D005729 ORTHO05D007026 5.8e-45 184.9 192 64.1
HanXRQChr14g0451391 Helianthus annuus HOM05D005729 ORTHO05D007026 2.2e-44 183.0 187 62.0
SGA_v2.0_scaffold47G17637 Striga asiatica HOM05D005729 ORTHO05D007026 2.2e-44 183.0 194 61.3
THA.LOC104815860 Tarenaya hassleriana HOM05D005729 ORTHO05D007026 2.2e-44 183.0 195 62.6
FAN25G1272 Fragaria x ananassa HOM05D005729 ORTHO05D007026 2.9e-44 182.6 188 62.8
EL10As7g23751 Beta vulgaris HOM05D005729 ORTHO05D007026 4.9e-44 181.8 191 59.7
EL10Ac6g13393 Beta vulgaris HOM05D005729 ORTHO05D007026 8.4e-44 181.0 190 60.0
CAN.G473.157 Capsicum annuum HOM05D005729 ORTHO05D007026 8.4e-44 181.0 188 61.2
Lju41C60T1 Lonicera japonica HOM05D005729 ORTHO05D007026 8.4e-44 181.0 208 61.1
THA.LOC104826200 Tarenaya hassleriana HOM05D005729 ORTHO05D007026 8.4e-44 181.0 188 63.8
Ah.02g128910 Amaranthus hybridus HOM05D005729 ORTHO05D007026 4.2e-43 178.7 190 60.5
PGSC0003DMG400035897 Solanum tuberosum HOM05D005729 ORTHO05D007026 5.4e-43 178.3 187 60.4
Sopen02g039170 Solanum pennellii HOM05D005729 ORTHO05D007026 1.6e-42 176.8 187 61.0
Zm00001eb246070 Zea mays HOM05D005729 ORTHO05D007026 3.5e-42 175.6 189 52.9
Sp4g13900 Schrenkiella parvula HOM05D005729 ORTHO05D007026 2.3e-41 172.9 194 58.2
Aa31LG5G5560 Aethionema arabicum HOM05D005729 ORTHO05D007026 3.0e-41 172.6 191 60.2
HPP92_011631 Vanilla planifolia HOM05D005729 ORTHO05D007026 3.0e-41 172.6 192 60.4
Peaxi162Scf00420g00083 Petunia axillaris HOM05D005729 ORTHO05D007026 5.1e-41 171.8 188 59.6
Ca_08134_v3 Cicer arietinum L. HOM05D005729 ORTHO05D007026 1.1e-40 170.6 191 59.7
Gohir.D07G239700 Gossypium hirsutum HOM05D005729 ORTHO05D007026 3.3e-40 169.1 191 59.2
BcaC02g07982 Brassica carinata HOM05D005729 ORTHO05D007026 4.3e-40 168.7 191 59.2
C04p61110 Brassica napus HOM05D005729 ORTHO05D007026 4.3e-40 168.7 191 59.2
BolC4t27596H Brassica oleracea HOM05D005729 ORTHO05D007026 4.3e-40 168.7 191 59.2
Duzib264G0852 Durio zibethinus HOM05D005729 ORTHO05D007026 4.3e-40 168.7 198 59.6
Nitab4.5_0002172g0090 Nicotiana tabacum HOM05D005729 ORTHO05D007026 7.3e-40 167.9 189 57.7
Ciclev10016760m.g Citrus clementina HOM05D005729 ORTHO05D007026 1.6e-39 166.8 190 58.4
TWI34G0826 Tripterygium wilfordii HOM05D005729 ORTHO05D007026 1.6e-39 166.8 197 60.9
Migut.K01484 Erythranthe guttata HOM05D005729 ORTHO05D007026 2.1e-39 166.4 188 61.7
A04p24280 Brassica napus HOM05D005729 ORTHO05D007026 8.1e-39 164.5 192 58.9
BraA04t17947Z Brassica rapa HOM05D005729 ORTHO05D007026 8.1e-39 164.5 192 58.9
Os02g0595400 Oryza sativa ssp. japonica HOM05D005729 ORTHO05D007026 8.1e-39 164.5 189 56.6
CSS0008758 Camellia sinensis var. sinensis HOM05D005729 ORTHO05D007026 3.1e-38 162.5 135 72.6
Gorai.001G275800 Gossypium raimondii HOM05D005729 ORTHO05D007026 4.0e-38 162.2 190 57.9
Rhsim08G0039300 Rhododendron simsii HOM05D005729 ORTHO05D007026 9.0e-38 161.0 144 70.1
BcaB01g04046 Brassica carinata HOM05D005729 ORTHO05D007026 2.6e-37 159.5 192 54.7
ECA238G1999 Erigeron canadensis HOM05D005729 ORTHO05D007026 4.4e-37 158.7 189 59.3
Sc07g0003710 Simmondsia chinensis HOM05D005729 ORTHO05D007026 5.8e-37 158.3 186 58.6
Cfa016824 Carpinus fangiana HOM05D005729 ORTHO05D007026 1.3e-36 157.1 189 59.3
CSS0019060 Camellia sinensis var. sinensis HOM05D005729 ORTHO05D007026 1.7e-36 156.8 135 71.1
AL4G26660 Arabidopsis lyrata HOM05D005729 ORTHO05D007026 3.8e-36 155.6 189 55.0
Cfa007167 Carpinus fangiana HOM05D005729 ORTHO05D007026 6.4e-36 154.8 189 58.2
Carub.0004s1273 Capsella rubella HOM05D005729 ORTHO05D007026 1.1e-35 154.1 190 55.8
Haze_14943 Corylus avellana HOM05D005729 ORTHO05D007026 1.1e-35 154.1 189 58.7
PSO478G2072 Papaver somniferum HOM05D005729 ORTHO05D007026 1.1e-35 154.1 189 51.9
Gohir.A07G232500 Gossypium hirsutum HOM05D005729 ORTHO05D007026 1.9e-35 153.3 190 55.8
Haze_19869 Corylus avellana HOM05D005729 ORTHO05D007026 2.4e-35 152.9 185 59.5
AUR62036639 Chenopodium quinoa HOM05D005729 ORTHO05D007026 3.2e-35 152.5 186 55.4
Atru.chr6.2652 Acer truncatum HOM05D005729 ORTHO05D007026 1.2e-34 150.6 195 53.8
AT2G31410 Arabidopsis thaliana HOM05D005729 ORTHO05D007026 1.2e-34 150.6 190 54.2
A03p17590 Brassica napus HOM05D005729 ORTHO05D007026 1.2e-34 150.6 189 55.6
RcHm_v2.0_Chr6g0252241 Rosa chinensis HOM05D005729 ORTHO05D007026 2.7e-34 149.4 163 54.6
BraA03t11026Z Brassica rapa HOM05D005729 ORTHO05D007026 1.0e-33 147.5 192 53.6
C03p20700 Brassica napus HOM05D005729 ORTHO05D007026 1.7e-33 146.7 189 54.5
BolC3t14453H Brassica oleracea HOM05D005729 ORTHO05D007026 1.7e-33 146.7 189 54.5
RcHm_v2.0_Chr7g0240621 Rosa chinensis HOM05D005729 ORTHO05D007026 3.0e-33 146.0 163 53.4
CDE06G2057 Ceratophyllum demersum HOM05D005729 ORTHO05D007026 1.9e-32 143.3 118 64.4
Nitab4.5_0000519g0260 Nicotiana tabacum HOM05D005729 ORTHO05D007026 9.6e-32 141.0 149 61.1
RcHm_v2.0_Chr2g0115461 Rosa chinensis HOM05D005729 ORTHO05D007026 9.6e-32 141.0 163 51.5
Pp3c11_25830 Physcomitrium patens HOM05D005729 ORTHO05D007026 2.8e-31 139.4 182 47.8
PSO017G0758 Papaver somniferum HOM05D005729 ORTHO05D007026 4.8e-31 138.7 189 53.4
RcHm_v2.0_Chr5g0057561 Rosa chinensis HOM05D005729 ORTHO05D007026 3.1e-30 136.0 154 59.1
Sabra02G0180500 Salix brachista HOM05D005729 ORTHO05D007026 2.0e-29 133.3 184 47.3
AUR62034632 Chenopodium quinoa HOM05D000604 ORTHO05D004512 3.2e-27 125.9 129 52.7
RcHm_v2.0_Chr6g0272931 Rosa chinensis HOM05D005729 ORTHO05D007026 2.3e-25 119.8 135 53.3
RcHm_v2.0_Chr2g0117931 Rosa chinensis HOM05D005729 ORTHO05D007026 3.0e-25 119.4 150 56.0
Cc07_g01230 Coffea canephora HOM05D005729 ORTHO05D007026 1.1e-24 117.5 203 49.3
RcHm_v2.0_Chr1g0315821 Rosa chinensis HOM05D005729 ORTHO05D007026 2.5e-24 116.3 150 54.7
RcHm_v2.0_Chr5g0026441 Rosa chinensis HOM05D005729 ORTHO05D007026 1.3e-23 114.0 131 51.1
RcHm_v2.0_Chr6g0295141 Rosa chinensis HOM05D005729 ORTHO05D007026 2.6e-21 106.3 110 63.6
Mapoly0127s0012 Marchantia polymorpha HOM05D005729 ORTHO05D007026 3.8e-20 102.4 187 47.6
COL.COLO4_13365 Corchorus olitorius HOM05D005729 ORTHO05D007026 4.9e-20 102.1 99 55.6
Hma1.2p1_0033F.1_g021130 Hydrangea macrophylla HOM05D005729 ORTHO05D007026 2.3e-17 93.2 104 62.5
Haze_19868 Corylus avellana HOM05D005729 ORTHO05D007026 3.0e-17 92.8 98 55.1
Sc14g0008230 Simmondsia chinensis HOM05D005729 ORTHO05D007026 7.4e-16 88.2 132 47.0
Atru.chr5.655 Acer truncatum HOM05D000598 ORTHO05D000480 1.1e-14 84.3 132 50.8
Psat4g074600 Pisum sativum HOM05D005729 ORTHO05D007026 2.4e-14 83.2 118 46.6
Lalb_Chr14g0364061 Lupinus albus HOM05D005729 ORTHO05D007026 3.2e-11 72.8 61 82.0
Solyc03g083260.1 Solanum lycopersicum HOM05D005729 ORTHO05D007026 3.2e-11 72.8 86 47.7
Psat4g074560 Pisum sativum HOM05D005729 ORTHO05D007026 9.3e-11 71.2 126 39.7
CBR_g4589 Chara braunii HOM05D005729 ORTHO05D007026 3.5e-10 69.3 183 42.6
EL10Ac1g01380 Beta vulgaris HOM05D005729 ORTHO05D007026 3.7e-07 59.3 67 49.3
FvH4_3g27021 Fragaria vesca HOM05D005729 ORTHO05D007026 8.2e-07 58.2 68 51.5


User provided reference genes

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