Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0436 Trochodendron aralioides HOM05D006506 ORTHO05D007809 1.2e-178 629.8 321 100.0
MBI06_g17213_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 3.7e-153 545.0 318 85.5
Dinv38132 Davidia involucrata HOM05D006506 ORTHO05D007809 2.7e-151 538.9 328 81.1
Actinidia15748 Actinidia chinensis HOM05D006506 ORTHO05D007809 7.8e-151 537.3 327 80.4
CSS0043074 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 3.0e-150 535.4 327 80.7
CSS0005655 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 1.1e-149 533.5 327 80.4
GSVIVG01017366001 Vitis vinifera HOM05D006506 ORTHO05D007809 1.2e-148 530.0 323 81.1
PSO210G7208 Papaver somniferum HOM05D006506 ORTHO05D007809 2.6e-146 522.3 321 82.6
Prupe.3G090200 Prunus persica HOM05D006506 ORTHO05D007809 4.4e-146 521.5 321 80.7
Thecc.06G030600 Theobroma cacao HOM05D006506 ORTHO05D007809 1.7e-145 519.6 318 80.8
Duzib160G0645 Durio zibethinus HOM05D006506 ORTHO05D007809 4.9e-145 518.1 321 79.8
Rhsim08G0211600 Rhododendron simsii HOM05D006506 ORTHO05D007809 4.9e-145 518.1 327 78.3
vmacro19011 Vaccinium macrocarpon HOM05D006506 ORTHO05D007809 1.1e-144 516.9 324 79.0
MD17G1214300 Malus domestica HOM05D006506 ORTHO05D007809 3.2e-144 515.4 321 79.1
Duzib160G0598 Durio zibethinus HOM05D006506 ORTHO05D007809 4.2e-144 515.0 321 79.4
Haze_13452 Corylus avellana HOM05D006506 ORTHO05D007809 5.4e-144 514.6 321 79.8
DCAR_021353 Daucus carota HOM05D006506 ORTHO05D007809 7.1e-144 514.2 326 78.8
ECA232G3059 Erigeron canadensis HOM05D006506 ORTHO05D007809 7.1e-144 514.2 323 77.4
CsaV3_7G032300 Cucumis sativus L. HOM05D006506 ORTHO05D007809 9.2e-144 513.8 321 80.1
COL.COLO4_11906 Corchorus olitorius HOM05D006506 ORTHO05D007809 1.2e-143 513.5 321 79.8
Cfa001948 Carpinus fangiana HOM05D006506 ORTHO05D007809 2.1e-143 512.7 321 79.4
MELO3C023430.2 Cucumis melo HOM05D006506 ORTHO05D007809 6.0e-143 511.1 321 79.8
CANSAT56G2592 Cannabis sativa HOM05D006506 ORTHO05D007809 1.0e-142 510.4 321 78.8
HanXRQChr16g0500351 Helianthus annuus HOM05D006506 ORTHO05D007809 2.3e-142 509.2 325 77.8
Nitab4.5_0005461g0020 Nicotiana tabacum HOM05D006506 ORTHO05D007809 3.0e-142 508.8 328 77.1
Sed0005275 Sechium edule HOM05D006506 ORTHO05D007809 3.0e-142 508.8 321 78.5
CiPaw.01G249400 Carya illinoinensis HOM05D006506 ORTHO05D007809 3.9e-142 508.4 321 78.8
Ciclev10026100m.g Citrus clementina HOM05D006506 ORTHO05D007809 8.7e-142 507.3 319 77.7
CAN.G407.9 Capsicum annuum HOM05D006506 ORTHO05D007809 1.1e-141 506.9 328 75.9
Nitab4.5_0010868g0010 Nicotiana tabacum HOM05D006506 ORTHO05D007809 1.1e-141 506.9 328 76.8
Peaxi162Scf00553g00510 Petunia axillaris HOM05D006506 ORTHO05D007809 2.5e-141 505.8 328 77.1
PGSC0003DMG400014148 Solanum tuberosum HOM05D006506 ORTHO05D007809 3.3e-141 505.4 328 75.3
Lsat_1_v5_gn_4_87520 Lactuca sativa HOM05D006506 ORTHO05D007809 1.6e-140 503.1 323 76.8
Gohir.D06G120300 Gossypium hirsutum HOM05D006506 ORTHO05D007809 2.8e-140 502.3 321 77.9
Gohir.A06G107700 Gossypium hirsutum HOM05D006506 ORTHO05D007809 6.2e-140 501.1 321 77.6
Gorai.010G138400 Gossypium raimondii HOM05D006506 ORTHO05D007809 1.1e-139 500.4 321 77.6
Sopen03g036430 Solanum pennellii HOM05D006506 ORTHO05D007809 1.4e-139 500.0 328 74.4
Potri.001G201700 Populus trichocarpa HOM05D006506 ORTHO05D007809 5.3e-139 498.0 322 77.0
Cpa.g.sc67.28 Carica papaya HOM05D006506 ORTHO05D007809 1.2e-138 496.9 321 76.3
Lj2g0016250 Lotus japonicus HOM05D006506 ORTHO05D007809 1.2e-138 496.9 322 75.2
TWI75G0153 Tripterygium wilfordii HOM05D006506 ORTHO05D007809 2.0e-138 496.1 321 75.4
arahy.Tifrunner.gnm1.ann1.9QS0XN Arachis hypogaea HOM05D006506 ORTHO05D007809 9.9e-138 493.8 321 75.1
arahy.Tifrunner.gnm1.ann1.SP1H5F Arachis hypogaea HOM05D006506 ORTHO05D007809 6.4e-137 491.1 321 74.5
Cc04_g04540 Coffea canephora HOM05D006506 ORTHO05D007809 1.9e-136 489.6 324 73.8
Lalb_Chr06g0175141 Lupinus albus HOM05D006506 ORTHO05D007809 2.4e-136 489.2 326 74.5
FAN02G0099 Fragaria x ananassa HOM05D006506 ORTHO05D007809 3.2e-136 488.8 321 75.7
FAN05G2665 Fragaria x ananassa HOM05D000001 ORTHO05D007809 3.2e-136 488.8 321 76.0
FAN09G0903 Fragaria x ananassa HOM05D006506 ORTHO05D007809 3.2e-136 488.8 321 76.0
FAN14G4998 Fragaria x ananassa HOM05D000001 ORTHO05D007809 3.2e-136 488.8 321 75.7
Duzib235G0689 Durio zibethinus HOM05D006506 ORTHO05D007809 1.2e-135 486.9 323 75.9
FvH4_6g29440 Fragaria vesca HOM05D006506 ORTHO05D007809 1.2e-135 486.9 321 75.4
HPP92_007331 Vanilla planifolia HOM05D006506 ORTHO05D007809 1.2e-135 486.9 318 75.5
Sabra01G0159300 Salix brachista HOM05D006506 ORTHO05D007809 1.6e-135 486.5 322 75.8
ATR0605G102 Amborella trichopoda HOM05D006506 ORTHO05D007809 2.1e-135 486.1 321 75.4
SHI11239 Sapria himalayana HOM05D006506 ORTHO05D007809 1.0e-134 483.8 322 73.9
RcHm_v2.0_Chr2g0134931 Rosa chinensis HOM05D006506 ORTHO05D007809 1.3e-134 483.4 321 75.4
CARHR042650 Cardamine hirsuta HOM05D006506 ORTHO05D007809 1.5e-133 479.9 321 73.5
Oeu027841.1 Olea europaea HOM05D006506 ORTHO05D007809 1.5e-133 479.9 325 73.2
Carub.0001s4149 Capsella rubella HOM05D006506 ORTHO05D007809 4.3e-133 478.4 321 73.2
PGR031G2298 Punica granatum HOM05D006506 ORTHO05D007809 4.3e-133 478.4 323 74.3
AL1G60780 Arabidopsis lyrata HOM05D006506 ORTHO05D007809 5.6e-133 478.0 321 73.2
BcaB02g10986 Brassica carinata HOM05D006506 ORTHO05D007809 5.6e-133 478.0 321 73.2
AT1G52530 Arabidopsis thaliana HOM05D006506 ORTHO05D007809 7.3e-133 477.6 321 73.2
BraA05t20791Z Brassica rapa HOM05D006506 ORTHO05D007809 1.6e-132 476.5 321 73.2
A05p18940 Brassica napus HOM05D006506 ORTHO05D007809 2.1e-132 476.1 321 73.2
Sp1g39080 Schrenkiella parvula HOM05D006506 ORTHO05D007809 2.8e-132 475.7 321 72.9
Thhalv10011665m.g Eutrema salsugineum HOM05D006506 ORTHO05D007809 3.6e-132 475.3 321 72.3
Aa31LG10G2470 Aethionema arabicum HOM05D006506 ORTHO05D007809 3.1e-131 472.2 321 71.7
Ca_04862_v3 Cicer arietinum L. HOM05D006506 ORTHO05D007809 3.1e-131 472.2 321 72.6
Ciclev10027407m.g Citrus clementina HOM05D006506 ORTHO05D007809 3.1e-131 472.2 319 73.7
MSTRG.11150 Avicennia marina HOM05D006506 ORTHO05D007809 5.3e-131 471.5 321 72.9
Aqoxy7G02198 Aquilegia oxysepala HOM05D006506 ORTHO05D007809 1.2e-130 470.3 296 79.4
VMungo0464G1487 Vigna mungo HOM05D006506 ORTHO05D007809 1.5e-130 469.9 321 72.0
Phvul.004G032600 Phaseolus vulgaris HOM05D006506 ORTHO05D007809 2.0e-130 469.5 321 72.3
Psat1g070040 Pisum sativum HOM05D006506 ORTHO05D007809 2.6e-130 469.2 321 72.3
BcaC08g44001 Brassica carinata HOM05D006506 ORTHO05D007809 3.4e-130 468.8 321 72.6
C06p14060 Brassica napus HOM05D006506 ORTHO05D007809 3.8e-129 465.3 321 72.0
BolC6t36584H Brassica oleracea HOM05D006506 ORTHO05D007809 3.8e-129 465.3 321 72.0
Medtr1g082730 Medicago truncatula HOM05D006506 ORTHO05D007809 1.4e-128 463.4 321 70.7
Glyma.13G059800 Glycine max HOM05D006506 ORTHO05D007809 2.4e-128 462.6 321 71.0
TPR.G16552 Trifolium pratense HOM05D006506 ORTHO05D007809 1.2e-127 460.3 321 70.7
Solyc03g117530.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 2.3e-126 456.1 303 73.6
Ciclev10026188m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.5e-125 453.4 319 72.1
Ciclev10027493m.g Citrus clementina HOM05D006506 ORTHO05D007809 3.3e-125 452.2 300 75.7
Ciclev10027064m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.1e-124 449.5 300 74.7
SEGI_33428 Sequoiadendron giganteum HOM05D006506 ORTHO05D007809 2.8e-124 449.1 320 69.1
SalBow2G1795 Salvia bowleyana HOM05D006506 ORTHO05D007809 1.4e-123 446.8 321 68.2
SGA_v2.0_scaffold37G14756 Striga asiatica HOM05D006506 ORTHO05D007809 1.4e-123 446.8 324 68.8
Migut.I00752 Erythranthe guttata HOM05D006506 ORTHO05D007809 3.8e-121 438.7 321 68.5
Os04g0528400 Oryza sativa ssp. japonica HOM05D006506 ORTHO05D007809 8.4e-121 437.6 326 64.7
unitig_62.g23595 Utricularia gibba HOM05D006506 ORTHO05D007809 2.1e-119 433.0 321 67.0
Ciclev10027055m.g Citrus clementina HOM05D006506 ORTHO05D007809 4.6e-119 431.8 306 71.6
HPP92_007333 Vanilla planifolia HOM05D006506 ORTHO05D007809 1.6e-116 423.3 321 68.2
AagrBONN_evm.TU.Sc2ySwM_117.4079 Anthoceros agrestis HOM05D006506 ORTHO05D007809 1.4e-115 420.2 316 65.8
Manes.11G058300 Manihot esculenta HOM05D006506 ORTHO05D007809 6.3e-108 394.8 258 75.2
Pp3c1_24880 Physcomitrium patens HOM05D006506 ORTHO05D007809 8.2e-108 394.4 318 61.6
Ah.08g214330 Amaranthus hybridus HOM05D006506 ORTHO05D007809 9.0e-107 391.0 319 61.4
AUR62030047 Chenopodium quinoa HOM05D006506 ORTHO05D007809 2.9e-105 386.0 319 60.8
EL10Ac7g17638 Beta vulgaris HOM05D006506 ORTHO05D007809 1.6e-103 380.2 312 61.5
Mapoly0090s0026 Marchantia polymorpha HOM05D006506 ORTHO05D007809 7.9e-103 377.9 321 59.2
THA.LOC104818016 Tarenaya hassleriana HOM05D006506 ORTHO05D007809 3.0e-102 375.9 269 70.6
Zm00001eb427100 Zea mays HOM05D006506 ORTHO05D007809 3.0e-102 375.9 328 57.0
Ciclev10027054m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.6e-98 362.8 257 72.8
SMO115G0207 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 2.6e-98 362.8 317 57.4
CDE11G1201 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 4.2e-96 355.5 288 65.6
Atru.chr1.2888 Acer truncatum HOM05D006506 ORTHO05D007809 3.6e-95 352.4 228 77.6
AUR62002633 Chenopodium quinoa HOM05D006506 ORTHO05D007809 2.3e-94 349.7 294 60.2
Lj9E498T1 Lonicera japonica HOM05D006506 ORTHO05D007809 5.1e-94 348.6 214 80.4
CBR_g8656 Chara braunii HOM05D006506 ORTHO05D007809 2.8e-92 342.8 323 54.5
Ciclev10027056m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.3e-89 334.0 306 60.1
Sc05g0005410 Simmondsia chinensis HOM05D006506 ORTHO05D007809 2.1e-87 326.6 286 60.5
CDE08G0717 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 6.7e-86 321.6 215 75.3
Prupe.2G072500 Prunus persica HOM05D006506 ORTHO05D007809 3.2e-59 233.0 298 46.6
TPR.G26194 Trifolium pratense HOM05D002479 ORTHO05D007809 6.6e-41 172.2 161 55.9
Solyc04g026070.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 8.1e-39 165.2 121 64.5
Cre12.g524350 Chlamydomonas reinhardtii HOM05D006506 ORTHO05D007809 3.4e-37 159.8 273 37.7
Ciclev10027644m.g Citrus clementina HOM05D006506 ORTHO05D007809 7.8e-34 148.7 107 68.2
ATR0068G037 Amborella trichopoda HOM05D006506 ORTHO05D007809 1.0e-33 148.3 117 65.0
SMO018G0003 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 2.8e-31 140.2 113 61.1
Ciclev10026990m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.2e-26 124.8 107 61.7
Solyc08g044480.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 2.1e-26 124.0 116 52.6
Nn4g24996 Nelumbo nucifera HOM05D006506 ORTHO05D007809 3.5e-26 123.2 62 91.9
PRCOL_00003381 Prasinoderma coloniale HOM05D006506 ORTHO05D007809 6.6e-25 119.0 368 30.4
MBI08_g32097_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 1.5e-24 117.9 72 81.9
MCO05G139 Micromonas commoda HOM05D006506 ORTHO05D007809 2.1e-23 114.0 333 30.0
Mapoly1721s0002 Marchantia polymorpha HOM05D006506 ORTHO05D007809 6.2e-15 85.9 62 62.9


User provided reference genes

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