Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0417 Trochodendron aralioides HOM05D002617 ORTHO05D006076 0.0e+00 1120.5 553 100.0
TAR629G1560 Trochodendron aralioides HOM05D002617 ORTHO05D006076 6.1e-244 847.4 547 79.9
Dinv34860 Davidia involucrata HOM05D002617 ORTHO05D006076 3.6e-180 635.6 555 62.9
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 3.5e-175 619.0 533 62.3
Hma1.2p1_0550F.1_g177160 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 5.4e-168 595.1 552 59.6
Actinidia10244 Actinidia chinensis HOM05D002617 ORTHO05D006076 2.5e-165 586.3 555 59.5
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 4.8e-164 582.0 546 60.4
CiPaw.03G005500 Carya illinoinensis HOM05D002617 ORTHO05D006076 1.4e-163 580.5 479 63.3
Lj4A130T19 Lonicera japonica HOM05D002617 ORTHO05D006076 7.9e-159 564.7 552 59.2
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 5.1e-158 562.0 614 53.3
Manes.02G066000 Manihot esculenta HOM05D002617 ORTHO05D006076 6.9e-155 551.6 601 52.9
Prupe.3G241000 Prunus persica HOM05D002617 ORTHO05D006076 4.5e-154 548.9 605 54.9
Oeu032874.2 Olea europaea HOM05D002617 ORTHO05D006076 2.2e-153 546.6 554 55.1
TWI74G0354 Tripterygium wilfordii HOM05D002617 ORTHO05D006076 1.1e-152 544.3 546 55.5
Cpa.g.sc179.38 Carica papaya HOM05D002617 ORTHO05D006076 3.0e-150 536.2 535 57.0
Peaxi162Scf00479g00121 Petunia axillaris HOM05D002617 ORTHO05D006076 5.1e-150 535.4 547 54.1
Rhsim07G0215800 Rhododendron simsii HOM05D002617 ORTHO05D006076 4.8e-148 528.9 544 56.4
Nitab4.5_0003461g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 6.2e-148 528.5 555 53.2
QL02p053118 Quercus lobata HOM05D002617 ORTHO05D006076 8.2e-148 528.1 569 54.1
Aqoxy3G00424 Aquilegia oxysepala HOM05D002617 ORTHO05D006076 1.1e-147 527.7 547 55.4
Atru.chr8.797 Acer truncatum HOM05D002617 ORTHO05D006076 1.4e-147 527.3 546 57.1
DCAR_026269 Daucus carota HOM05D002617 ORTHO05D006076 4.1e-147 525.8 545 54.7
RcHm_v2.0_Chr2g0163421 Rosa chinensis HOM05D002617 ORTHO05D006076 5.3e-147 525.4 557 55.7
Cc07_g05010 Coffea canephora HOM05D002617 ORTHO05D006076 1.0e-145 521.2 555 54.2
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 1.3e-145 520.8 547 55.9
Duzib177G0627 Durio zibethinus HOM05D002617 ORTHO05D006076 2.5e-144 516.5 536 54.7
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 1.6e-143 513.8 691 46.5
MSTRG.23826 Avicennia marina HOM05D002617 ORTHO05D006076 3.9e-142 509.2 520 54.0
Nitab4.5_0004487g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 1.6e-140 503.8 555 52.4
Thecc.04G140400 Theobroma cacao HOM05D002617 ORTHO05D006076 1.8e-139 500.4 562 53.0
MD17G1073100 Malus domestica HOM05D002617 ORTHO05D006076 2.4e-139 500.0 458 60.7
Potri.017G111300 Populus trichocarpa HOM05D002617 ORTHO05D006076 5.3e-139 498.8 587 51.1
MD09G1082600 Malus domestica HOM05D002617 ORTHO05D006076 1.2e-138 497.7 459 59.9
Potri.004G104400 Populus trichocarpa HOM05D002617 ORTHO05D006076 2.0e-138 496.9 469 57.8
COL.COLO4_16207 Corchorus olitorius HOM05D002617 ORTHO05D006076 3.4e-138 496.1 560 51.6
Hma1.2p1_0136F.1_g062020 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 5.9e-138 495.4 427 63.5
PSO478G3319 Papaver somniferum HOM05D002617 ORTHO05D006076 1.0e-137 494.6 631 47.5
PSO017G2525 Papaver somniferum HOM05D002617 ORTHO05D006076 5.5e-136 488.8 631 46.9
Gohir.A13G161700 Gossypium hirsutum HOM05D002617 ORTHO05D006076 7.2e-136 488.4 567 52.7
Sopen03g009500 Solanum pennellii HOM05D002617 ORTHO05D000002 2.7e-135 486.5 549 49.7
CAN.G153.18 Capsicum annuum HOM05D002617 ORTHO05D006076 6.1e-135 485.3 548 49.8
Sabra04G0077200 Salix brachista HOM05D002617 ORTHO05D006076 6.1e-135 485.3 499 54.3
Gohir.D13G172300 Gossypium hirsutum HOM05D002617 ORTHO05D006076 1.4e-134 484.2 567 52.6
Gorai.013G188400 Gossypium raimondii HOM05D002617 ORTHO05D006076 1.4e-134 484.2 567 52.6
Actinidia19593 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.5e-133 480.7 417 61.9
Duzib235G0774 Durio zibethinus HOM05D002617 ORTHO05D006076 2.5e-133 479.9 578 50.5
Solyc03g045060.3 Solanum lycopersicum HOM05D002617 ORTHO05D006076 2.2e-132 476.9 549 49.7
FvH4_6g45480 Fragaria vesca HOM05D002617 ORTHO05D006076 2.8e-132 476.5 535 53.6
CANSAT64G0391 Cannabis sativa HOM05D002617 ORTHO05D006076 1.4e-131 474.2 486 55.6
GSVIVG01011977001 Vitis vinifera HOM05D002617 ORTHO05D006076 3.1e-131 473.0 443 58.9
FAN02G4200 Fragaria x ananassa HOM05D002617 ORTHO05D006076 5.3e-131 472.2 567 51.5
ATR0598G067 Amborella trichopoda HOM05D002617 ORTHO05D006076 6.5e-129 465.3 547 52.3
ClCG11G005280 Citrullus lanatus HOM05D002617 ORTHO05D006076 6.5e-129 465.3 532 52.4
FAN14G4630 Fragaria x ananassa HOM05D002617 ORTHO05D006076 5.5e-128 462.2 535 52.5
Lalb_Chr02g0158361 Lupinus albus HOM05D002617 ORTHO05D006076 1.2e-127 461.1 524 51.1
Eucgr.J01460 Eucalyptus grandis HOM05D002617 ORTHO05D006076 1.6e-127 460.7 547 49.4
Glyma.13G047700 Glycine max HOM05D002617 ORTHO05D006076 6.1e-127 458.8 491 52.1
arahy.Tifrunner.gnm1.ann1.LH188B Arachis hypogaea HOM05D002617 ORTHO05D006076 3.0e-126 456.4 471 54.4
MELO3C022066.2 Cucumis melo HOM05D002617 ORTHO05D006076 6.7e-126 455.3 527 52.6
arahy.Tifrunner.gnm1.ann1.B4TVCG Arachis hypogaea HOM05D002617 ORTHO05D006076 1.1e-125 454.5 470 53.6
CsaV3_5G039050 Cucumis sativus L. HOM05D002617 ORTHO05D006076 3.3e-125 453.0 526 52.7
ECA232G1923 Erigeron canadensis HOM05D002617 ORTHO05D006076 4.4e-125 452.6 557 48.5
HanXRQChr14g0439661 Helianthus annuus HOM05D002617 ORTHO05D006076 9.7e-125 451.4 561 49.0
Sabra17G0092600 Salix brachista HOM05D002617 ORTHO05D006076 3.7e-124 449.5 590 47.5
VMungo0540G1549 Vigna mungo HOM05D002617 ORTHO05D006076 3.7e-124 449.5 466 53.6
Sc12g0007600 Simmondsia chinensis HOM05D002617 ORTHO05D006076 1.4e-123 447.6 549 50.8
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 5.3e-123 445.7 573 47.6
Lj2g0025982 Lotus japonicus HOM05D002617 ORTHO05D006076 7.7e-122 441.8 417 59.5
Oeu043861.1 Olea europaea HOM05D002617 ORTHO05D006076 7.7e-122 441.8 651 44.1
Sed0011770 Sechium edule HOM05D002617 ORTHO05D006076 5.5e-120 435.6 543 50.5
Phvul.L003037 Phaseolus vulgaris HOM05D002617 ORTHO05D006076 1.6e-119 434.1 479 52.2
Lalb_Chr21g0317971 Lupinus albus HOM05D002617 ORTHO05D006076 4.7e-119 432.6 534 48.1
EL10Ac5g11460 Beta vulgaris HOM05D002617 ORTHO05D006076 6.3e-116 422.2 543 47.9
Medtr6g016990 Medicago truncatula HOM05D002617 ORTHO05D006076 2.4e-115 420.2 504 51.4
vmacro04611 Vaccinium macrocarpon HOM05D002617 ORTHO05D006076 3.1e-115 419.9 543 48.3
Ca_26958_v3 Cicer arietinum L. HOM05D002617 ORTHO05D006076 1.6e-114 417.5 501 50.5
AUR62029876 Chenopodium quinoa HOM05D002617 ORTHO05D006076 2.0e-114 417.2 418 54.3
PGR042G0381 Punica granatum HOM05D002617 ORTHO05D006076 1.7e-113 414.1 551 47.2
AUR62025837 Chenopodium quinoa HOM05D002617 ORTHO05D006076 1.2e-111 407.9 417 53.2
Psat0s1160g0440 Pisum sativum HOM05D002617 ORTHO05D006076 4.7e-111 406.0 533 46.7
Glyma.19G040800 Glycine max HOM05D002617 ORTHO05D006076 1.4e-110 404.4 422 52.8
HanXRQChr15g0489371 Helianthus annuus HOM05D002617 ORTHO05D006076 1.2e-109 401.4 443 52.4
SGA_v2.0_scaffold204G41654 Striga asiatica HOM05D002617 ORTHO05D006076 5.7e-109 399.1 558 44.8
TPR.G9686 Trifolium pratense HOM05D002617 ORTHO05D006076 3.5e-106 389.8 455 51.9
THA.LOC104805556 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 8.0e-103 378.6 524 47.3
Sc11g0002970 Simmondsia chinensis HOM05D002617 ORTHO05D006076 3.0e-102 376.7 448 49.3
Lsat_1_v5_gn_4_175880 Lactuca sativa HOM05D002617 ORTHO05D006076 6.8e-102 375.6 469 48.8
Aa31LG9G16990 Aethionema arabicum HOM05D002617 ORTHO05D006076 2.0e-101 374.0 438 51.4
THA.LOC104822697 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 4.4e-101 372.9 519 46.1
unitig_736.g22255 Utricularia gibba HOM05D002617 ORTHO05D006076 1.7e-100 370.9 420 49.3
HPP92_011591 Vanilla planifolia HOM05D002617 ORTHO05D006076 1.7e-100 370.9 524 45.2
AL7G51930 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 2.2e-100 370.5 498 47.8
AT5G38600 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 2.8e-100 370.2 535 46.0
Thhalv10027714m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 2.7e-98 363.6 533 45.6
EL10Ac6g14526 Beta vulgaris HOM05D002617 ORTHO05D006076 3.5e-98 363.2 436 49.1
Carub.0002s1348 Capsella rubella HOM05D002617 ORTHO05D006076 1.1e-96 358.2 409 50.9
Carub.0007s3725 Capsella rubella HOM05D002617 ORTHO05D006076 2.5e-96 357.1 536 46.3
Sp7g03340 Schrenkiella parvula HOM05D002617 ORTHO05D006076 2.8e-95 353.6 414 51.9
BcaB02g08001 Brassica carinata HOM05D002617 ORTHO05D006076 5.2e-94 349.4 488 45.9
BcaC08g44397 Brassica carinata HOM05D002617 ORTHO05D006076 8.9e-94 348.6 484 45.9
Hund05776 Selenicereus undatus HOM05D002617 ORTHO05D006076 2.6e-93 347.1 366 54.9
C06p18260 Brassica napus HOM05D000054 ORTHO05D006076 7.5e-93 345.5 484 45.7
AL2G25720 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 1.3e-92 344.7 311 57.6
A07p19790 Brassica napus HOM05D002617 ORTHO05D006076 4.9e-92 342.8 444 47.5
BraA07t29680Z Brassica rapa HOM05D002617 ORTHO05D006076 4.9e-92 342.8 444 47.5
BolC6t37041H Brassica oleracea HOM05D002617 ORTHO05D006076 6.4e-92 342.4 484 45.7
Actinidia13004 Actinidia chinensis HOM05D002617 ORTHO05D006076 8.3e-92 342.0 351 55.6
Actinidia29638 Actinidia chinensis HOM05D002617 ORTHO05D006076 4.1e-91 339.7 355 54.6
DCAR_026709 Daucus carota HOM05D002617 ORTHO05D006076 7.0e-91 339.0 413 48.9
Aa31LG2G3590 Aethionema arabicum HOM05D002617 ORTHO05D006076 9.2e-91 338.6 446 48.0
AT1G67210 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 9.2e-91 338.6 320 56.6
CARHR214050 Cardamine hirsuta HOM05D002617 ORTHO05D006076 1.2e-90 338.2 442 49.1
Os06g0495700 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D006076 1.0e-89 335.1 474 45.1
Zm00001eb182330 Zea mays HOM05D002617 ORTHO05D006076 1.7e-89 334.3 563 41.2
CARHR059670 Cardamine hirsuta HOM05D002617 ORTHO05D006076 2.5e-88 330.5 404 49.8
Sp5g22140 Schrenkiella parvula HOM05D002617 ORTHO05D006076 2.8e-87 327.0 324 55.2
Ah.03g138020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 5.2e-86 322.8 408 47.1
BraA02t06470Z Brassica rapa HOM05D002617 ORTHO05D006076 1.2e-85 321.6 397 50.1
BcaB05g24247 Brassica carinata HOM05D002617 ORTHO05D006076 2.6e-85 320.5 431 47.6
A02p14070 Brassica napus HOM05D002617 ORTHO05D006076 3.4e-85 320.1 392 50.3
AUR62007748 Chenopodium quinoa HOM05D002617 ORTHO05D006076 7.5e-85 318.9 508 41.9
BcaC03g14816 Brassica carinata HOM05D002617 ORTHO05D006076 2.9e-84 317.0 400 48.8
BolC2t08421H Brassica oleracea HOM05D002617 ORTHO05D006076 2.9e-84 317.0 400 48.8
Thhalv10018682m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 2.9e-84 317.0 332 53.6
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 4.9e-84 316.2 276 63.0
FAN05G1346 Fragaria x ananassa HOM05D002617 ORTHO05D006076 4.9e-84 316.2 402 50.0
C02p22680 Brassica napus HOM05D002617 ORTHO05D006076 6.4e-84 315.8 401 49.1
CSS0005448 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 3.2e-83 313.5 286 59.4
CDE03G0434 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 4.1e-83 313.2 322 55.3
AUR62002941 Chenopodium quinoa HOM05D002617 ORTHO05D006076 2.3e-81 307.4 500 41.4
FAN09G0965 Fragaria x ananassa HOM05D002617 ORTHO05D006076 6.8e-78 295.8 350 51.4
CSS0031641 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 1.5e-72 278.1 236 61.0
Lsat_1_v5_gn_8_37540 Lactuca sativa HOM05D002617 ORTHO05D006076 1.9e-72 277.7 391 43.7
Nn8g40574 Nelumbo nucifera HOM05D002617 ORTHO05D006076 4.3e-72 276.6 261 60.5
Mapoly0126s0021 Marchantia polymorpha HOM05D002617 ORTHO05D006076 3.6e-63 246.9 359 42.6
SMO005G0008 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 1.1e-62 245.4 273 49.1
Dinv33922 Davidia involucrata HOM05D002617 ORTHO05D006076 8.9e-62 242.3 196 65.8
Lj3A1022T61 Lonicera japonica HOM05D002617 ORTHO05D006076 1.4e-59 235.0 241 55.2
SMO197G0066 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 1.1e-51 208.8 273 45.8
Ah.02g115020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 4.6e-50 203.4 414 36.0
PGSC0003DMG400003361 Solanum tuberosum HOM05D002617 ORTHO05D006076 3.3e-40 170.6 174 51.7
CBR_g21963 Chara braunii HOM05D002617 ORTHO05D006076 7.4e-40 169.5 508 29.9
SGA_v2.0_scaffold150G36614 Striga asiatica HOM05D002617 ORTHO05D006076 2.1e-39 167.9 611 29.3
Glyma.19G043901 Glycine max HOM05D002617 ORTHO05D006076 3.1e-38 164.1 202 48.0
CDE04G2372 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 2.5e-35 154.5 242 40.5
CSS0013506 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 3.5e-34 150.6 212 44.8
AagrBONN_evm.TU.Sc2ySwM_344.4970 Anthoceros agrestis HOM05D002617 ORTHO05D006076 1.7e-28 131.7 203 39.4
Pp3c8_12390 Physcomitrium patens HOM05D002617 ORTHO05D006076 1.3e-25 122.1 189 39.7
SalBow1G4795 Salvia bowleyana HOM05D002617 ORTHO05D006076 3.0e-25 120.9 225 38.7
CDE03G0290 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 3.2e-11 74.3 204 31.4
SEGI_27964 Sequoiadendron giganteum HOM05D002617 ORTHO05D006076 5.7e-08 63.5 80 45.0
Lsat_1_v5_gn_8_136421 Lactuca sativa HOM05D002617 ORTHO05D048373 7.4e-08 63.2 54 57.4
Actinidia19277 Actinidia chinensis HOM05D002617 ORTHO05D006076 2.2e-07 61.6 42 71.4


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