Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0405 Trochodendron aralioides HOM05D008112 ORTHO05D010225 6.0e-49 197.2 100 100.0
TAR622G0251 Trochodendron aralioides HOM05D008112 ORTHO05D010225 2.2e-27 125.6 105 65.7
Nn3g17844 Nelumbo nucifera HOM05D008112 ORTHO05D010225 2.4e-21 105.5 105 56.2
Gohir.D02G169900 Gossypium hirsutum HOM05D008112 ORTHO05D010225 2.0e-20 102.4 82 61.0
Gorai.005G190400 Gossypium raimondii HOM05D008112 ORTHO05D010225 2.6e-20 102.1 82 61.0
Manes.14G102600 Manihot esculenta HOM05D008112 ORTHO05D010225 2.6e-20 102.1 104 51.9
TAR629G1885 Trochodendron aralioides HOM05D008112 ORTHO05D010225 2.9e-19 98.6 69 69.6
Gohir.A03G146800 Gossypium hirsutum HOM05D008112 ORTHO05D010225 1.1e-18 96.7 82 58.5
Manes.06G068400 Manihot esculenta HOM05D008112 ORTHO05D010225 2.4e-18 95.5 104 50.0
Potri.010G124900 Populus trichocarpa HOM05D008112 ORTHO05D010225 2.4e-18 95.5 105 51.4
Prupe.1G311100 Prunus persica HOM05D008112 ORTHO05D010225 2.4e-18 95.5 105 48.6
Potri.008G120800 Populus trichocarpa HOM05D008112 ORTHO05D010225 3.2e-18 95.1 106 51.9
Cfa018594 Carpinus fangiana HOM05D008112 ORTHO05D010225 9.3e-18 93.6 104 54.8
Hma1.2p1_0061F.1_g033900 Hydrangea macrophylla HOM05D008112 ORTHO05D010225 7.9e-17 90.5 99 49.5
Thecc.02G230800 Theobroma cacao HOM05D008112 ORTHO05D010225 7.9e-17 90.5 91 51.6
CiPaw.15G085200 Carya illinoinensis HOM05D008112 ORTHO05D010225 3.9e-16 88.2 108 50.0
FvH4_4g27360 Fragaria vesca HOM05D008112 ORTHO05D010225 9.6e-15 83.6 108 51.9
FAN12G3697 Fragaria x ananassa HOM05D008112 ORTHO05D010225 9.6e-15 83.6 108 51.9
FAN12G3827 Fragaria x ananassa HOM05D008112 ORTHO05D010225 9.6e-15 83.6 108 51.9
Haze_17483 Corylus avellana HOM05D008112 ORTHO05D010225 1.3e-14 83.2 95 50.5
FAN22G0823 Fragaria x ananassa HOM05D008112 ORTHO05D010225 1.6e-14 82.8 115 48.7
FAN07G1645 Fragaria x ananassa HOM05D008112 ORTHO05D010225 2.8e-14 82.0 115 48.7
Medtr1g110820 Medicago truncatula HOM05D008112 ORTHO05D010225 4.8e-14 81.3 99 45.5
RcHm_v2.0_Chr4g0435171 Rosa chinensis HOM05D008112 ORTHO05D010225 4.8e-14 81.3 116 48.3
Cpa.g.sc1.41 Carica papaya HOM05D008112 ORTHO05D010225 1.1e-13 80.1 96 45.8
Glyma.20G115800 Glycine max HOM05D008112 ORTHO05D010225 6.9e-13 77.4 101 40.6
Ciclev10017355m.g Citrus clementina HOM05D008112 ORTHO05D010225 1.2e-12 76.6 77 46.8
TPR.G1513 Trifolium pratense HOM05D008112 ORTHO05D010225 1.5e-12 76.3 91 46.2
CiPaw.16G065000 Carya illinoinensis HOM05D008112 ORTHO05D010225 2.0e-12 75.9 104 49.0
Glyma.10G274200 Glycine max HOM05D008112 ORTHO05D010225 3.4e-12 75.1 100 40.0
CSS0024667 Camellia sinensis var. sinensis HOM05D008112 ORTHO05D010225 7.6e-12 73.9 105 46.7
Lj2g0015777 Lotus japonicus HOM05D008112 ORTHO05D010225 1.0e-11 73.6 83 50.6
Glyma.08G262400 Glycine max HOM05D008112 ORTHO05D010225 2.2e-11 72.4 99 42.4
Atru.chr11.70 Acer truncatum HOM05D008112 ORTHO05D010225 3.8e-11 71.6 113 38.9
Rhsim12G0084800 Rhododendron simsii HOM05D008112 ORTHO05D010225 8.4e-11 70.5 89 46.1
Lsat_1_v5_gn_4_17580 Lactuca sativa HOM05D008112 ORTHO05D010225 1.4e-10 69.7 101 47.5
Sabra10G0094800 Salix brachista HOM05D008112 ORTHO05D010225 1.9e-10 69.3 85 49.4
MELO3C012251.2 Cucumis melo HOM05D008112 ORTHO05D010225 7.1e-10 67.4 86 43.0
Dinv34826 Davidia involucrata HOM05D008112 ORTHO05D010225 7.1e-10 67.4 101 42.6
Aa31LG7G9070 Aethionema arabicum HOM05D010181 ORTHO05D012280 3.5e-09 65.1 82 40.2
CsaV3_5G034340 Cucumis sativus L. HOM05D008112 ORTHO05D010225 6.0e-09 64.3 79 41.8
Lalb_Chr06g0166071 Lupinus albus HOM05D008112 ORTHO05D010225 7.9e-09 63.9 88 43.2
Aqoxy3G00299 Aquilegia oxysepala HOM05D008112 ORTHO05D010225 1.3e-08 63.2 85 43.5
Lalb_Chr17g0342121 Lupinus albus HOM05D008112 ORTHO05D010225 1.8e-08 62.8 88 42.0
Phvul.007G027300 Phaseolus vulgaris HOM05D008112 ORTHO05D010225 1.8e-08 62.8 101 35.6
Phvul.003G035700 Phaseolus vulgaris HOM05D008112 ORTHO05D010225 3.9e-08 61.6 102 35.3
TPR.G39819 Trifolium pratense HOM05D008112 ORTHO05D010225 5.1e-08 61.2 91 36.3
AL1G39880 Arabidopsis lyrata HOM05D010181 ORTHO05D012280 1.1e-07 60.1 94 37.2
AT1G25425 Arabidopsis thaliana HOM05D010181 ORTHO05D012280 1.5e-07 59.7 95 38.9
BraA09t39439Z Brassica rapa HOM05D010181 ORTHO05D012280 1.9e-07 59.3 96 36.5
Lalb_Chr10g0100011 Lupinus albus HOM05D008112 ORTHO05D010225 1.9e-07 59.3 94 38.3
ClCG05G022690 Citrullus lanatus HOM05D008112 ORTHO05D010225 2.5e-07 58.9 90 37.8
A09p39360 Brassica napus HOM05D010181 ORTHO05D012280 4.3e-07 58.2 96 35.4
BcaC05g26462 Brassica carinata HOM05D010181 ORTHO05D012280 5.7e-07 57.8 95 35.8
C05p25040 Brassica napus HOM05D010181 ORTHO05D012280 5.7e-07 57.8 95 35.8
BolC5t31237H Brassica oleracea HOM05D010181 ORTHO05D012280 5.7e-07 57.8 95 35.8
BcaC05g26668 Brassica carinata HOM05D010181 ORTHO05D012280 7.4e-07 57.4 94 36.2
Migut.E00342 Erythranthe guttata HOM05D008112 ORTHO05D010225 7.4e-07 57.4 109 38.5
DCAR_023658 Daucus carota HOM05D008112 ORTHO05D010225 1.6e-06 56.2 110 34.5
Sp1g22780 Schrenkiella parvula HOM05D010181 ORTHO05D012280 2.1e-06 55.8 98 37.8
SGA_v2.0_scaffold124G33520 Striga asiatica HOM05D008112 ORTHO05D010225 2.1e-06 55.8 103 41.7
Lalb_Chr02g0145981 Lupinus albus HOM05D008112 ORTHO05D010225 2.8e-06 55.5 106 37.7
Thhalv10009743m.g Eutrema salsugineum HOM05D010181 ORTHO05D012280 6.2e-06 54.3 97 37.1
CARHR026030 Cardamine hirsuta HOM05D010181 ORTHO05D012280 8.2e-06 53.9 96 36.5


User provided reference genes

Program Settings