Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0362 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.3e-87 326.2 155 100.0
TAR371G1227 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.5e-75 286.2 149 91.3
TAR371G0430 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.1e-44 182.2 138 68.1
TAR371G0292 Trochodendron aralioides HOM05D000007 ORTHO05D007252 5.3e-44 181.4 138 67.4
TAR371G0448 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.9e-39 165.2 96 81.2
TAR371G1173 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.7e-34 149.8 124 61.3
TAR371G0392 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.8e-34 148.7 159 54.7
TAR371G0432 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.8e-34 148.7 159 54.7
TAR371G0093 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.2e-33 145.2 163 51.5
TAR371G0593 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.8e-29 132.5 80 76.2
TAR371G1202 Trochodendron aralioides HOM05D000007 ORTHO05D007252 5.8e-27 124.8 136 56.6
TAR371G0451 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.0e-26 124.0 159 45.3
TAR371G1268 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.9e-26 121.7 145 51.7
TAR371G1225 Trochodendron aralioides HOM05D000007 ORTHO05D007252 6.5e-26 121.3 121 53.7
TAR302G0003 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.5e-24 115.5 130 53.1
TAR371G0533 Trochodendron aralioides HOM05D000007 ORTHO05D007252 5.7e-22 108.2 115 53.9
TAR371G0023 Trochodendron aralioides HOM05D000007 ORTHO05D022563 2.8e-21 105.9 95 57.9
MBI19_g26732_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 1.2e-19 100.5 123 44.7
Hma1.2p1_0022F.1_g014760 Hydrangea macrophylla HOM05D000007 ORTHO05D007252 2.6e-19 99.4 128 42.2
MBI19_g35552_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D000017 4.5e-19 98.6 132 43.9
MBI19_g35549_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 5.0e-18 95.1 132 42.4
Actinidia38511 Actinidia chinensis HOM05D000007 ORTHO05D007252 1.4e-17 93.6 129 41.9
Oeu044692.1 Olea europaea HOM05D000007 ORTHO05D007252 5.5e-17 91.7 132 40.9
MBI19_g26733_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 1.6e-16 90.1 132 40.2
MBI19_g00242_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 2.1e-16 89.7 117 45.3
Migut.J00822 Erythranthe guttata HOM05D000007 ORTHO05D007252 1.3e-15 87.0 136 37.5
Rhsim03G0268000 Rhododendron simsii HOM05D000007 ORTHO05D007252 1.3e-15 87.0 135 39.3
Rhsim07G0245000 Rhododendron simsii HOM05D001026 ORTHO05D007252 1.8e-15 86.7 135 39.3
Dinv18626 Davidia involucrata HOM05D009844 ORTHO05D007252 3.0e-15 85.9 136 35.3
Dinv26242 Davidia involucrata HOM05D009844 ORTHO05D007252 3.0e-15 85.9 136 35.3
SGA_v2.0_scaffold31G12737 Striga asiatica HOM05D000007 ORTHO05D007252 3.0e-15 85.9 139 38.1
TAR374G0955 Trochodendron aralioides HOM05D013022 ORTHO05D007252 3.0e-15 85.9 140 37.9
MSTRG.5952 Avicennia marina HOM05D000007 ORTHO05D007252 6.7e-15 84.7 135 37.0
PGSC0003DMG400008507 Solanum tuberosum HOM05D000007 ORTHO05D007252 2.8e-13 79.3 125 37.6
TAR369G0473 Trochodendron aralioides HOM05D000007 ORTHO05D001644 8.2e-13 77.8 138 35.5
TAR371G0647 Trochodendron aralioides HOM05D000007 ORTHO05D007252 8.2e-13 77.8 86 48.8
Dinv41199 Davidia involucrata HOM05D001519 ORTHO05D001403 1.1e-12 77.4 139 35.3
TAR374G0551 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.5e-11 73.6 124 34.7
Nitab4.5_0000157g0100 Nicotiana tabacum HOM05D000007 ORTHO05D007252 4.5e-11 72.0 136 31.6
Nitab4.5_0000157g0110 Nicotiana tabacum HOM05D000007 ORTHO05D007252 5.9e-11 71.6 135 34.1
Dinv26480 Davidia involucrata HOM05D009844 ORTHO05D007252 3.8e-10 68.9 132 32.6
Nitab4.5_0000157g0070 Nicotiana tabacum HOM05D000007 ORTHO05D007252 6.5e-10 68.2 138 32.6
Rhsim11G0104000 Rhododendron simsii HOM05D007560 ORTHO05D005947 6.5e-10 68.2 148 27.0
Actinidia38508 Actinidia chinensis HOM05D000007 ORTHO05D013933 8.5e-10 67.8 129 32.6
MBI15_g33468_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 8.5e-10 67.8 122 34.4
Nitab4.5_0003898g0010 Nicotiana tabacum HOM05D000007 ORTHO05D007252 8.5e-10 67.8 125 33.6
MBI19_g46422_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 1.4e-09 67.0 70 47.1
Rhsim11G0103500 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.4e-09 67.0 148 27.7
Aqoxy2G03479 Aquilegia oxysepala HOM05D000007 ORTHO05D000521 2.5e-09 66.2 142 33.8
TAR302G0004 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.2e-09 65.5 58 60.3
Nitab4.5_0007469g0010 Nicotiana tabacum HOM05D000007 ORTHO05D007252 7.2e-09 64.7 125 35.2
Nitab4.5_0007469g0030 Nicotiana tabacum HOM05D000007 ORTHO05D007252 7.2e-09 64.7 121 37.2
Rhsim13G0145100 Rhododendron simsii HOM05D000007 ORTHO05D000017 1.2e-08 63.9 153 28.8
Aqoxy4G00563 Aquilegia oxysepala HOM05D000007 ORTHO05D000521 1.6e-08 63.5 135 31.9
Gohir.A11G150700 Gossypium hirsutum HOM05D000007 ORTHO05D000521 2.1e-08 63.2 145 30.3
Gohir.D11G157200 Gossypium hirsutum HOM05D000007 ORTHO05D000521 2.1e-08 63.2 145 30.3
Gorai.007G167700 Gossypium raimondii HOM05D000007 ORTHO05D000521 2.1e-08 63.2 145 30.3
Rhsim11G0104400 Rhododendron simsii HOM05D007560 ORTHO05D005947 2.1e-08 63.2 104 31.7
TAR375G0745 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.1e-08 63.2 88 42.0
Gohir.A11G151000 Gossypium hirsutum HOM05D000007 ORTHO05D000521 2.7e-08 62.8 154 27.9
Gohir.D11G157700 Gossypium hirsutum HOM05D000007 ORTHO05D000521 2.7e-08 62.8 154 27.9
Manes.09G077457 Manihot esculenta HOM05D000007 ORTHO05D000017 2.7e-08 62.8 150 35.3
Aqoxy2G03976 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 3.6e-08 62.4 93 35.5
Cfa008807 Carpinus fangiana HOM05D009398 ORTHO05D011511 4.6e-08 62.0 136 31.6
Gohir.D11G157800 Gossypium hirsutum HOM05D000007 ORTHO05D000521 4.6e-08 62.0 147 27.9
COL.COLO4_20026 Corchorus olitorius HOM05D000007 ORTHO05D000521 6.1e-08 61.6 157 27.4
Dinv29686 Davidia involucrata HOM05D000007 ORTHO05D000521 6.1e-08 61.6 132 30.3
TAR371G1271 Trochodendron aralioides HOM05D000007 ORTHO05D007252 6.1e-08 61.6 61 50.8
Aqoxy3G04127 Aquilegia oxysepala HOM05D000007 ORTHO05D000521 7.9e-08 61.2 140 30.7
Rhsim11G0103700 Rhododendron simsii HOM05D007560 ORTHO05D005947 7.9e-08 61.2 148 26.4
Rhsim11G0103900 Rhododendron simsii HOM05D007560 ORTHO05D005947 7.9e-08 61.2 148 26.4
Thecc.05G284100 Theobroma cacao HOM05D000007 ORTHO05D001644 7.9e-08 61.2 127 29.1
Lj5C336T5 Lonicera japonica HOM05D007560 ORTHO05D005947 1.0e-07 60.8 119 31.9
Lj6C390T13 Lonicera japonica HOM05D007560 ORTHO05D005947 1.0e-07 60.8 144 29.2
Gorai.007G168200 Gossypium raimondii HOM05D000007 ORTHO05D000521 1.4e-07 60.5 154 27.3
Nitab4.5_0001504g0060 Nicotiana tabacum HOM05D000007 ORTHO05D007252 1.4e-07 60.5 140 28.6
Duzib211G0499 Durio zibethinus HOM05D000007 ORTHO05D000521 1.8e-07 60.1 150 31.3
Lj8C38T12 Lonicera japonica HOM05D007560 ORTHO05D005947 1.8e-07 60.1 141 27.7
Manes.12G062601 Manihot esculenta HOM05D000007 ORTHO05D000521 1.8e-07 60.1 149 32.2
Atru.chr1.2424 Acer truncatum HOM05D000007 ORTHO05D000017 2.3e-07 59.7 142 32.4
Atru.chr1.2426 Acer truncatum HOM05D000007 ORTHO05D000017 2.3e-07 59.7 142 32.4
Duzib138G1139 Durio zibethinus HOM05D000007 ORTHO05D000521 2.3e-07 59.7 144 28.5
Gorai.007G168300 Gossypium raimondii HOM05D000007 ORTHO05D000521 3.9e-07 58.9 147 26.5
Rhsim11G0104200 Rhododendron simsii HOM05D007560 ORTHO05D005947 3.9e-07 58.9 94 33.0
Ciclev10015426m.g Citrus clementina HOM05D000007 ORTHO05D000521 5.1e-07 58.5 147 32.7
COL.COLO4_25855 Corchorus olitorius HOM05D000007 ORTHO05D000521 5.1e-07 58.5 146 27.4
Eucgr.K00668 Eucalyptus grandis HOM05D000007 ORTHO05D000521 5.1e-07 58.5 139 31.7
Hma1.2p1_0084F.1_g043690 Hydrangea macrophylla HOM05D000007 ORTHO05D007252 5.1e-07 58.5 137 31.4
Peaxi162Scf00783g00335 Petunia axillaris HOM05D009844 ORTHO05D007252 5.1e-07 58.5 81 35.8
QL04p068797 Quercus lobata HOM05D000007 ORTHO05D000521 5.1e-07 58.5 97 35.1
QL04p069725 Quercus lobata HOM05D000007 ORTHO05D000521 5.1e-07 58.5 97 35.1
Hma1.2p1_0127F.1_g059580 Hydrangea macrophylla HOM05D000007 ORTHO05D000017 6.7e-07 58.2 143 33.6
Manes.12G062501 Manihot esculenta HOM05D000007 ORTHO05D000521 6.7e-07 58.2 149 31.5
Ciclev10017685m.g Citrus clementina HOM05D000007 ORTHO05D000521 8.8e-07 57.8 142 29.6
COL.COLO4_25849 Corchorus olitorius HOM05D000007 ORTHO05D000521 8.8e-07 57.8 156 26.9
ECA240G0628 Erigeron canadensis HOM05D000007 ORTHO05D000521 8.8e-07 57.8 137 26.3
QL03p062618 Quercus lobata HOM05D009398 ORTHO05D009073 8.8e-07 57.8 146 30.1
QL03p065997 Quercus lobata HOM05D009398 ORTHO05D011511 8.8e-07 57.8 137 29.2
QL03p066121 Quercus lobata HOM05D009398 ORTHO05D011511 8.8e-07 57.8 137 29.2
Thecc.01G185200 Theobroma cacao HOM05D000007 ORTHO05D000521 8.8e-07 57.8 144 29.9
Gohir.D11G157300 Gossypium hirsutum HOM05D000007 ORTHO05D000521 1.1e-06 57.4 154 27.3
Dinv21217 Davidia involucrata HOM05D000007 ORTHO05D007252 1.5e-06 57.0 134 31.3
Duzib177G0911 Durio zibethinus HOM05D000007 ORTHO05D001644 1.5e-06 57.0 147 23.1
MD02G1067600 Malus domestica HOM05D009792 ORTHO05D009073 1.5e-06 57.0 83 41.0
CARHR082600 Cardamine hirsuta HOM05D000007 ORTHO05D000521 2.0e-06 56.6 129 34.1
Dinv11913 Davidia involucrata HOM05D000007 ORTHO05D000017 2.0e-06 56.6 138 30.4
Duzib133G1250 Durio zibethinus HOM05D000007 ORTHO05D000521 2.0e-06 56.6 151 31.1
Aqoxy6G01701 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.5e-06 56.2 93 36.6
AT3G07870 Arabidopsis thaliana HOM05D000007 ORTHO05D000521 2.5e-06 56.2 129 34.1
FAN22G0060 Fragaria x ananassa HOM05D000007 ORTHO05D009073 2.5e-06 56.2 82 35.4
Gorai.007G167800 Gossypium raimondii HOM05D000007 ORTHO05D000521 2.5e-06 56.2 151 26.5
TWI36G0953 Tripterygium wilfordii HOM05D000007 ORTHO05D000521 2.5e-06 56.2 144 29.2
Aqoxy5G01975 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 3.3e-06 55.8 78 37.2
COL.COLO4_25859 Corchorus olitorius HOM05D000007 ORTHO05D000521 3.3e-06 55.8 150 27.3
Dinv26455 Davidia involucrata HOM05D000007 ORTHO05D013933 3.3e-06 55.8 72 40.3
Dinv36193 Davidia involucrata HOM05D003981 ORTHO05D003666 3.3e-06 55.8 106 33.0
FAN01G1574 Fragaria x ananassa HOM05D000007 ORTHO05D009073 3.3e-06 55.8 138 31.9
FAN04G2735 Fragaria x ananassa HOM05D002662 ORTHO05D002957 3.3e-06 55.8 80 37.5
FAN18G0802 Fragaria x ananassa HOM05D002662 ORTHO05D003666 3.3e-06 55.8 94 36.2
FAN18G1682 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.3e-06 55.8 94 36.2
Gohir.D07G173800 Gossypium hirsutum HOM05D000007 ORTHO05D000521 3.3e-06 55.8 141 33.3
Gorai.001G194200 Gossypium raimondii HOM05D000007 ORTHO05D000521 3.3e-06 55.8 141 33.3
Hma1.2p1_0657F.1_g197080 Hydrangea macrophylla HOM05D000007 ORTHO05D000017 3.3e-06 55.8 120 32.5
Rhsim01G0117500 Rhododendron simsii HOM05D000007 ORTHO05D000017 3.3e-06 55.8 150 27.3
Thecc.01G185500 Theobroma cacao HOM05D000007 ORTHO05D000521 3.3e-06 55.8 151 30.5
Eucgr.E03976 Eucalyptus grandis HOM05D000007 ORTHO05D000017 4.3e-06 55.5 159 28.9
Thhalv10020831m.g Eutrema salsugineum HOM05D000007 ORTHO05D000521 4.3e-06 55.5 70 50.0
MD03G1110700 Malus domestica HOM05D000007 ORTHO05D009073 4.3e-06 55.5 86 39.5
Oeu056889.1 Olea europaea HOM05D000007 ORTHO05D007252 4.3e-06 55.5 117 29.9
PSO541G0569 Papaver somniferum HOM05D000007 ORTHO05D000017 4.3e-06 55.5 151 26.5
Sp3g06790 Schrenkiella parvula HOM05D000007 ORTHO05D000521 4.3e-06 55.5 70 50.0
Haze_06940 Corylus avellana HOM05D000007 ORTHO05D000017 5.7e-06 55.1 92 40.2
Haze_11821 Corylus avellana HOM05D009398 ORTHO05D011511 5.7e-06 55.1 136 28.7
Gohir.A07G175934 Gossypium hirsutum HOM05D000007 ORTHO05D000521 5.7e-06 55.1 88 39.8
Lj5C336G7 Lonicera japonica HOM05D007560 ORTHO05D005947 5.7e-06 55.1 136 28.7
AL3G19240 Arabidopsis lyrata HOM05D000007 ORTHO05D000521 7.4e-06 54.7 129 33.3
COL.COLO4_10484 Corchorus olitorius HOM05D013022 ORTHO05D007252 7.4e-06 54.7 142 35.9
Duzib138G1457 Durio zibethinus HOM05D000007 ORTHO05D000521 7.4e-06 54.7 94 37.2
Duzib211G0565 Durio zibethinus HOM05D000007 ORTHO05D000521 7.4e-06 54.7 150 29.3
Eucgr.A01071 Eucalyptus grandis HOM05D000007 ORTHO05D000521 7.4e-06 54.7 82 41.5
FvH4_1g00691 Fragaria vesca HOM05D003981 ORTHO05D003666 7.4e-06 54.7 98 33.7
FAN28G1753 Fragaria x ananassa HOM05D003981 ORTHO05D003666 7.4e-06 54.7 98 33.7
Lj8C356T1 Lonicera japonica HOM05D007560 ORTHO05D005947 7.4e-06 54.7 139 26.6
Lj8P356T21 Lonicera japonica HOM05D007560 ORTHO05D005947 7.4e-06 54.7 139 26.6
QL10p051055 Quercus lobata HOM05D000007 ORTHO05D000521 7.4e-06 54.7 135 26.7
THA.LOC104819049 Tarenaya hassleriana HOM05D000007 ORTHO05D000521 7.4e-06 54.7 129 31.8
vmacro01618 Vaccinium macrocarpon HOM05D000007 ORTHO05D000521 7.4e-06 54.7 151 27.8
Aqoxy5G04187 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 9.7e-06 54.3 98 29.6
CSS0040592 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D003666 9.7e-06 54.3 124 29.0
COL.COLO4_15337 Corchorus olitorius HOM05D000007 ORTHO05D001644 9.7e-06 54.3 102 31.4
vmacro03637 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 9.7e-06 54.3 88 36.4


User provided reference genes

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