Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0317 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.1e-25 119.0 51 100.0
TAR371G0835 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.2e-24 115.5 51 98.0
Cfa007843 Carpinus fangiana HOM05D006437 ORTHO05D007973 2.4e-22 107.8 49 93.9
TAR371G1269 Trochodendron aralioides HOM05D006437 ORTHO05D007973 2.1e-21 104.8 51 88.2
TAR371G0259 Trochodendron aralioides HOM05D006437 ORTHO05D007973 2.7e-21 104.4 51 88.2
GSVIVG01030860001 Vitis vinifera HOM05D006437 ORTHO05D007973 3.5e-21 104.0 51 86.3
Aqoxy7G00638 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 1.0e-20 102.4 51 80.4
CiPaw.03G068600 Carya illinoinensis HOM05D006437 ORTHO05D007973 1.3e-20 102.1 48 89.6
Haze_14223 Corylus avellana HOM05D006437 ORTHO05D007973 1.3e-20 102.1 49 85.7
QL11p004106 Quercus lobata HOM05D006437 ORTHO05D007973 3.3e-19 97.4 48 85.4
MD09G1261500 Malus domestica HOM05D006437 ORTHO05D007973 5.6e-19 96.7 48 87.5
Lj6g0018768 Lotus japonicus HOM05D006437 ORTHO05D007973 7.3e-19 96.3 48 81.2
CSS0043713 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 9.5e-19 95.9 46 84.8
Os01g0644200 Oryza sativa ssp. japonica HOM05D006437 ORTHO05D007973 9.5e-19 95.9 48 83.3
ClCG05G010950 Citrullus lanatus HOM05D006437 ORTHO05D007973 1.2e-18 95.5 48 81.2
Hma1.2p1_0832F.1_g225650 Hydrangea macrophylla HOM05D006437 ORTHO05D007973 1.2e-18 95.5 48 85.4
SalBow7G1639 Salvia bowleyana HOM05D006437 ORTHO05D007973 1.2e-18 95.5 51 78.4
TAR629G2663 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.2e-18 95.5 48 85.4
BcaC04g18789 Brassica carinata HOM05D006437 ORTHO05D007973 2.1e-18 94.7 51 74.5
CSS0019264 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 2.1e-18 94.7 51 74.5
MELO3C020290.2 Cucumis melo HOM05D006437 ORTHO05D007973 2.1e-18 94.7 48 79.2
Migut.L00468 Erythranthe guttata HOM05D006437 ORTHO05D007973 2.1e-18 94.7 48 83.3
Medtr3g067720 Medicago truncatula HOM05D006437 ORTHO05D007973 2.1e-18 94.7 48 83.3
Phvul.001G231901 Phaseolus vulgaris HOM05D006437 ORTHO05D007973 2.1e-18 94.7 48 83.3
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 2.8e-18 94.4 51 76.5
Carub.0006s1569 Capsella rubella HOM05D006437 ORTHO05D007973 2.8e-18 94.4 51 74.5
Aa31LG5G13890 Aethionema arabicum HOM05D006437 ORTHO05D007973 3.6e-18 94.0 48 81.2
Ca_08164_v3 Cicer arietinum L. HOM05D006437 ORTHO05D007973 3.6e-18 94.0 48 81.2
CANSAT78G0649 Cannabis sativa HOM05D006437 ORTHO05D007973 4.7e-18 93.6 48 81.2
AL6G28540 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 6.2e-18 93.2 51 72.5
Lsat_1_v5_gn_2_81461 Lactuca sativa HOM05D006437 ORTHO05D007973 6.2e-18 93.2 49 79.6
Zm00001eb158640 Zea mays HOM05D006437 ORTHO05D007973 6.2e-18 93.2 48 81.2
CARHR195740 Cardamine hirsuta HOM05D006437 ORTHO05D007973 8.1e-18 92.8 51 72.5
Sed0002962 Sechium edule HOM05D006437 ORTHO05D007973 8.1e-18 92.8 48 81.2
Cc07_g08170 Coffea canephora HOM05D006437 ORTHO05D007973 1.1e-17 92.4 48 79.2
THA.LOC104820840 Tarenaya hassleriana HOM05D006437 ORTHO05D007973 1.1e-17 92.4 48 79.2
TPR.G15845 Trifolium pratense HOM05D006437 ORTHO05D007973 1.1e-17 92.4 51 78.4
Aqoxy5G01129 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 1.8e-17 91.7 48 72.9
ECA238G0319 Erigeron canadensis HOM05D006437 ORTHO05D007973 1.8e-17 91.7 49 75.5
Thhalv10015148m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 1.8e-17 91.7 51 72.5
Lalb_Chr10g0104491 Lupinus albus HOM05D006437 ORTHO05D007973 1.8e-17 91.7 48 83.3
Potri.017G128600 Populus trichocarpa HOM05D006437 ORTHO05D007973 1.8e-17 91.7 49 77.6
PGR042G3666 Punica granatum HOM05D006437 ORTHO05D007973 1.8e-17 91.7 48 79.2
Ciclev10013249m.g Citrus clementina HOM05D006437 ORTHO05D007973 2.4e-17 91.3 48 77.1
Medtr3g067715 Medicago truncatula HOM05D006437 ORTHO05D007973 2.4e-17 91.3 48 81.2
Eucgr.F02822 Eucalyptus grandis HOM05D006437 ORTHO05D007973 3.1e-17 90.9 48 79.2
Glyma.11G218400 Glycine max HOM05D006437 ORTHO05D007973 3.1e-17 90.9 48 79.2
Glyma.18G038851 Glycine max HOM05D006437 ORTHO05D007973 3.1e-17 90.9 48 79.2
Dinv19010 Davidia involucrata HOM05D006437 ORTHO05D007973 4.0e-17 90.5 48 77.1
Nn3g18216 Nelumbo nucifera HOM05D006437 ORTHO05D007973 5.2e-17 90.1 48 79.2
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 6.8e-17 89.7 46 82.6
HanXRQChr07g0193741 Helianthus annuus HOM05D006437 ORTHO05D007973 6.8e-17 89.7 48 79.2
Thecc.04G121100 Theobroma cacao HOM05D006437 ORTHO05D007973 6.8e-17 89.7 46 80.4
AL3G12980 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 8.9e-17 89.4 48 81.2
AT3G03341 Arabidopsis thaliana HOM05D006437 ORTHO05D007973 8.9e-17 89.4 48 81.2
Carub.0003s0252 Capsella rubella HOM05D006437 ORTHO05D007973 8.9e-17 89.4 48 81.2
CARHR077390 Cardamine hirsuta HOM05D006437 ORTHO05D007973 8.9e-17 89.4 48 81.2
Thhalv10022211m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 8.9e-17 89.4 48 81.2
FAN15G1984 Fragaria x ananassa HOM05D006437 ORTHO05D007973 8.9e-17 89.4 46 80.4
FAN27G3274 Fragaria x ananassa HOM05D006437 ORTHO05D007973 8.9e-17 89.4 46 80.4
Sp3g02370 Schrenkiella parvula HOM05D006437 ORTHO05D007973 8.9e-17 89.4 48 79.2
BcaC09g47741 Brassica carinata HOM05D006437 ORTHO05D007973 1.2e-16 89.0 48 79.2
Pp3c19_5460 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.2e-16 89.0 51 68.6
Pp3c19_5500 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.2e-16 89.0 51 68.6
Cpa.g.sc604.3 Carica papaya HOM05D006437 ORTHO05D007973 1.5e-16 88.6 51 72.5
AUR62023238 Chenopodium quinoa HOM05D006437 ORTHO05D007973 2.0e-16 88.2 48 75.0
BcaC09g47742 Brassica carinata HOM05D006437 ORTHO05D007973 2.6e-16 87.8 48 77.1
A06p26360 Brassica napus HOM05D006437 ORTHO05D007973 2.6e-16 87.8 48 77.1
BNapus_Darmor_BZH_scaffold_162p00120 Brassica napus HOM05D006437 ORTHO05D007973 2.6e-16 87.8 48 77.1
BNapus_Darmor_BZH_scaffold_78p00110 Brassica napus HOM05D006437 ORTHO05D007973 2.6e-16 87.8 48 77.1
BolC1t05835H Brassica oleracea HOM05D006437 ORTHO05D007973 2.6e-16 87.8 48 77.1
Nitab4.5_0004399g0060 Nicotiana tabacum HOM05D006437 ORTHO05D007973 2.6e-16 87.8 48 79.2
Pp3c21_13210 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.6e-16 87.8 51 68.6
Nn4g24140 Nelumbo nucifera HOM05D006437 ORTHO05D007973 3.4e-16 87.4 48 77.1
Solyc02g091390.3 Solanum lycopersicum HOM05D006437 ORTHO05D007973 3.4e-16 87.4 48 79.2
Sopen02g036010 Solanum pennellii HOM05D006437 ORTHO05D007973 3.4e-16 87.4 48 79.2
PGSC0003DMG400030646 Solanum tuberosum HOM05D006437 ORTHO05D007973 3.4e-16 87.4 48 79.2
EL10Ac2g04484 Beta vulgaris HOM05D006437 ORTHO05D007973 4.4e-16 87.0 48 72.9
Peaxi162Scf00118g00018 Petunia axillaris HOM05D006437 ORTHO05D007973 5.8e-16 86.7 48 75.0
AUR62023191 Chenopodium quinoa HOM05D006437 ORTHO05D007973 7.6e-16 86.3 48 72.9
Pp3c23_9530 Physcomitrium patens HOM05D006437 ORTHO05D007973 7.6e-16 86.3 51 68.6
DCAR_015248 Daucus carota HOM05D006437 ORTHO05D007973 9.9e-16 85.9 46 78.3
Mapoly0046s0059 Marchantia polymorpha HOM05D006437 ORTHO05D007973 9.9e-16 85.9 48 60.4
PSO017G0604 Papaver somniferum HOM05D006437 ORTHO05D007973 9.9e-16 85.9 48 66.7
PSO478G4394 Papaver somniferum HOM05D006437 ORTHO05D007973 9.9e-16 85.9 48 66.7
RcHm_v2.0_Chr1g0370661 Rosa chinensis HOM05D006437 ORTHO05D007973 9.9e-16 85.9 46 80.4
Pp3c24_9690 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.3e-15 85.5 48 66.7
BcaC05g30279 Brassica carinata HOM05D006437 ORTHO05D007973 1.7e-15 85.1 48 75.0
SMO111G0099 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 1.7e-15 85.1 50 70.0
AUR62023192 Chenopodium quinoa HOM05D006437 ORTHO05D007973 2.2e-15 84.7 48 70.8
Manes.02G074600 Manihot esculenta HOM05D006437 ORTHO05D007973 2.2e-15 84.7 46 76.1
CsaV3_1G027840 Cucumis sativus L. HOM05D006437 ORTHO05D007973 2.9e-15 84.3 48 68.8
CsaV3_3G021640 Cucumis sativus L. HOM05D006437 ORTHO05D007973 2.9e-15 84.3 48 68.8
Pp3c19_9840 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.9e-15 84.3 51 64.7
BraA01t04584Z Brassica rapa HOM05D006437 ORTHO05D007973 3.8e-15 84.0 48 75.0
AUR62023239 Chenopodium quinoa HOM05D006437 ORTHO05D007973 4.9e-15 83.6 48 68.8
SMO111G0160 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 1.1e-14 82.4 50 68.0
SMO111G0173 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 1.1e-14 82.4 50 68.0
SMO293G0011 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 1.1e-14 82.4 50 68.0
Mapoly0046s0058 Marchantia polymorpha HOM05D006437 ORTHO05D007973 1.4e-14 82.0 48 70.8
A10p21920 Brassica napus HOM05D006437 ORTHO05D007973 2.4e-14 81.3 44 72.7
Lalb_Chr10g0104501 Lupinus albus HOM05D006437 ORTHO05D007973 2.4e-14 81.3 49 69.4
SMO111G0149 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 3.2e-14 80.9 50 66.0
AL288U10020 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 4.2e-14 80.5 48 77.1
C09p59670 Brassica napus HOM05D006437 ORTHO05D007973 4.2e-14 80.5 43 74.4
BolC9t58806H Brassica oleracea HOM05D006437 ORTHO05D007973 4.2e-14 80.5 43 74.4
BraA10t44251Z Brassica rapa HOM05D006437 ORTHO05D007973 4.2e-14 80.5 43 74.4
PSO017G3771 Papaver somniferum HOM05D006437 ORTHO05D007973 4.2e-14 80.5 46 69.6
PSO478G0303 Papaver somniferum HOM05D006437 ORTHO05D007973 4.2e-14 80.5 46 69.6
Pp3c4_12160 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.2e-14 80.5 48 60.4
Pp3c8_12730 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.2e-14 80.5 48 64.6
Pp3c8_12731 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.2e-14 80.5 48 64.6
Prupe.3G158900 Prunus persica HOM05D006437 ORTHO05D007973 7.1e-14 79.7 46 69.6
FvH4_5g32381 Fragaria vesca HOM05D006437 ORTHO05D007973 9.2e-14 79.3 43 74.4
MELO3C020291.2 Cucumis melo HOM05D006437 ORTHO05D007973 2.1e-13 78.2 46 69.6
SEGI_27045 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 3.5e-13 77.4 46 60.9
SEGI_20637 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 1.0e-12 75.9 46 58.7
Mapoly0009s0147 Marchantia polymorpha HOM05D006437 ORTHO05D007973 1.5e-11 72.0 48 52.1
Aqoxy7G00636 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 3.6e-10 67.4 40 62.5
Rhsim08G0086000 Rhododendron simsii HOM05D006437 ORTHO05D007973 6.9e-09 63.2 39 66.7
SEGI_23307 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 1.5e-08 62.0 35 74.3
Cre03.g207152 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 1.4e-06 55.5 41 56.1
TAR371G0913 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.9e-06 55.1 27 81.5
Aa31LG11G12180 Aethionema arabicum HOM05D002536 ORTHO05D008091 9.3e-06 52.8 25 84.0


User provided reference genes

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