Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0310 Trochodendron aralioides HOM05D006288 ORTHO05D007416 5.1e-63 244.2 120 100.0
Nn4g23570 Nelumbo nucifera HOM05D006288 ORTHO05D007416 3.9e-31 138.3 87 78.2
Dinv34894 Davidia involucrata HOM05D006288 ORTHO05D007416 8.8e-31 137.1 93 75.3
Rhsim10G0068900 Rhododendron simsii HOM05D006288 ORTHO05D007416 1.1e-30 136.7 94 74.5
GSVIVG01036516001 Vitis vinifera HOM05D006288 ORTHO05D007416 4.4e-30 134.8 93 73.1
CSS0015874 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 9.7e-30 133.7 93 72.0
CSS0028097 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 9.7e-30 133.7 93 72.0
Rhsim08G0078400 Rhododendron simsii HOM05D006288 ORTHO05D007416 1.7e-29 132.9 94 71.3
TAR629G2245 Trochodendron aralioides HOM05D006288 ORTHO05D007416 2.2e-29 132.5 92 71.7
vmacro18118 Vaccinium macrocarpon HOM05D006288 ORTHO05D007416 1.1e-28 130.2 93 69.9
Duzib133G0644 Durio zibethinus HOM05D006288 ORTHO05D007416 1.8e-28 129.4 92 69.6
Duzib133G1254 Durio zibethinus HOM05D006288 ORTHO05D007416 1.8e-28 129.4 92 69.6
Manes.01G106000 Manihot esculenta HOM05D006288 ORTHO05D007416 2.4e-28 129.0 89 69.7
CSS0016762 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 4.1e-28 128.3 92 70.7
CSS0047986 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 4.1e-28 128.3 92 70.7
Gohir.D12G056100 Gossypium hirsutum HOM05D006288 ORTHO05D007416 5.3e-28 127.9 92 67.4
Gorai.008G059200 Gossypium raimondii HOM05D006288 ORTHO05D007416 5.3e-28 127.9 92 67.4
Cfa007713 Carpinus fangiana HOM05D006288 ORTHO05D007416 9.1e-28 127.1 89 74.2
Thecc.10G108100 Theobroma cacao HOM05D005170 ORTHO05D007416 1.6e-27 126.3 92 70.7
CSS0029131 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 2.0e-27 125.9 93 68.8
arahy.Tifrunner.gnm1.ann1.J0I6JM Arachis hypogaea HOM05D006288 ORTHO05D007416 2.6e-27 125.6 104 62.5
Gohir.A12G056700 Gossypium hirsutum HOM05D006288 ORTHO05D007416 2.6e-27 125.6 92 66.3
Migut.K00879 Erythranthe guttata HOM05D006288 ORTHO05D007416 3.5e-27 125.2 88 68.2
Oeu007090.1 Olea europaea HOM05D006288 ORTHO05D007416 3.5e-27 125.2 92 67.4
Actinidia26277 Actinidia chinensis HOM05D006288 ORTHO05D007416 4.5e-27 124.8 88 71.6
Ca_13697_v3 Cicer arietinum L. HOM05D006288 ORTHO05D007416 5.9e-27 124.4 88 69.3
Medtr3g034300 Medicago truncatula HOM05D006288 ORTHO05D007416 5.9e-27 124.4 88 69.3
Lj3g0015520 Lotus japonicus HOM05D006288 ORTHO05D007416 7.7e-27 124.0 88 68.2
Psat5g212400 Pisum sativum HOM05D006288 ORTHO05D007416 7.7e-27 124.0 90 67.8
Lsat_1_v5_gn_4_173980 Lactuca sativa HOM05D006288 ORTHO05D007416 1.0e-26 123.6 92 68.5
Atru.chr8.595 Acer truncatum HOM05D006288 ORTHO05D007416 1.7e-26 122.9 89 69.7
Cc07_g04640 Coffea canephora HOM05D006288 ORTHO05D007416 2.2e-26 122.5 92 66.3
Hma1.2p1_0304F.1_g119265 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 2.2e-26 122.5 93 65.6
Hma1.2p1_0304F.1_g119270 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 2.2e-26 122.5 93 65.6
Lsat_1_v5_gn_4_174040 Lactuca sativa HOM05D006288 ORTHO05D007416 2.2e-26 122.5 95 67.4
TPR.G14566 Trifolium pratense HOM05D006288 ORTHO05D007416 2.2e-26 122.5 88 67.0
Lalb_Chr21g0318141 Lupinus albus HOM05D006288 ORTHO05D007416 2.9e-26 122.1 88 65.9
Psat5g210840 Pisum sativum HOM05D006288 ORTHO05D007416 2.9e-26 122.1 90 66.7
Psat5g210920 Pisum sativum HOM05D006288 ORTHO05D007416 2.9e-26 122.1 86 69.8
Cpa.g.sc14.255 Carica papaya HOM05D006288 ORTHO05D007416 5.0e-26 121.3 92 64.1
Prupe.3G247000 Prunus persica HOM05D006288 ORTHO05D007416 8.5e-26 120.6 92 66.3
PSO210G6985 Papaver somniferum HOM05D006288 ORTHO05D007416 2.5e-25 119.0 86 66.3
PSO832G2920 Papaver somniferum HOM05D006288 ORTHO05D007416 2.5e-25 119.0 86 67.4
PGR004G0851 Punica granatum HOM05D006288 ORTHO05D007416 2.5e-25 119.0 91 69.2
Nitab4.5_0003203g0060 Nicotiana tabacum HOM05D006288 ORTHO05D007416 3.2e-25 118.6 85 67.1
MD09G1077100 Malus domestica HOM05D006288 ORTHO05D007416 4.2e-25 118.2 91 62.6
Glyma.13G051400 Glycine max HOM05D006288 ORTHO05D007416 5.5e-25 117.9 88 64.8
SGA_v2.0_scaffold30G12393 Striga asiatica HOM05D006288 ORTHO05D007416 5.5e-25 117.9 88 63.6
Peaxi162Scf00019g00316 Petunia axillaris HOM05D006288 ORTHO05D007416 7.2e-25 117.5 80 72.5
FAN14G1171 Fragaria x ananassa HOM05D006288 ORTHO05D007416 9.4e-25 117.1 89 69.7
TWI60G1717 Tripterygium wilfordii HOM05D006288 ORTHO05D007416 9.4e-25 117.1 84 65.5
VMungo0464G1523 Vigna mungo HOM05D006288 ORTHO05D007416 9.4e-25 117.1 88 64.8
PSO675G0562 Papaver somniferum HOM05D006288 ORTHO05D007416 1.2e-24 116.7 91 63.7
Glyma.19G037000 Glycine max HOM05D006288 ORTHO05D007416 1.6e-24 116.3 88 64.8
Sc11g0008960 Simmondsia chinensis HOM05D006288 ORTHO05D007416 2.1e-24 115.9 86 67.4
EL10Ac2g04409 Beta vulgaris HOM05D006288 ORTHO05D007416 2.7e-24 115.5 89 64.0
MD17G1067500 Malus domestica HOM05D006288 ORTHO05D007416 2.7e-24 115.5 91 60.4
ATR0691G027 Amborella trichopoda HOM05D006288 ORTHO05D007416 3.6e-24 115.2 100 60.0
PGSC0003DMG400026550 Solanum tuberosum HOM05D006288 ORTHO05D007416 3.6e-24 115.2 85 65.9
Hund16253 Selenicereus undatus HOM05D006288 ORTHO05D007416 4.7e-24 114.8 97 60.8
SalBow7G0779 Salvia bowleyana HOM05D006288 ORTHO05D007416 6.1e-24 114.4 88 65.9
CAN.G93.47 Capsicum annuum HOM05D006288 ORTHO05D007416 1.0e-23 113.6 82 67.1
FAN10G3625 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.0e-23 113.6 92 64.1
Ah.16g100880 Amaranthus hybridus HOM05D006288 ORTHO05D007416 1.4e-23 113.2 89 61.8
Manes.02G062500 Manihot esculenta HOM05D006288 ORTHO05D007416 1.4e-23 113.2 92 60.9
RcHm_v2.0_Chr2g0164421 Rosa chinensis HOM05D006288 ORTHO05D007416 1.4e-23 113.2 84 64.3
Solyc02g065690.3 Solanum lycopersicum HOM05D006288 ORTHO05D007416 1.4e-23 113.2 85 64.7
Sopen02g015910 Solanum pennellii HOM05D006288 ORTHO05D007416 1.4e-23 113.2 85 64.7
Actinidia17612 Actinidia chinensis HOM05D006288 ORTHO05D007416 2.3e-23 112.5 95 62.1
AUR62023135 Chenopodium quinoa HOM05D006288 ORTHO05D007416 2.3e-23 112.5 90 63.3
CANSAT64G2264 Cannabis sativa HOM05D005170 ORTHO05D007416 4.0e-23 111.7 81 65.4
Phvul.004G044700 Phaseolus vulgaris HOM05D006288 ORTHO05D007416 4.0e-23 111.7 85 62.4
CiPaw.03G081300 Carya illinoinensis HOM05D006288 ORTHO05D007416 6.7e-23 110.9 89 66.3
QL09p029462 Quercus lobata HOM05D006288 ORTHO05D007416 6.7e-23 110.9 92 59.8
Sabra17G0089200 Salix brachista HOM05D006288 ORTHO05D007416 1.2e-22 110.2 86 61.6
Eucgr.F02878 Eucalyptus grandis HOM05D006288 ORTHO05D007416 1.5e-22 109.8 82 67.1
PSO541G1058 Papaver somniferum HOM05D006288 ORTHO05D007416 1.5e-22 109.8 81 65.4
Potri.017G106200 Populus trichocarpa HOM05D006288 ORTHO05D007416 1.5e-22 109.8 81 64.2
SEGI_23755 Sequoiadendron giganteum HOM05D006288 ORTHO05D007416 3.3e-22 108.6 89 56.2
FAN10G2886 Fragaria x ananassa HOM05D006288 ORTHO05D007416 7.5e-22 107.5 85 61.2
CsaV3_4G009920 Cucumis sativus L. HOM05D006288 ORTHO05D007416 9.7e-22 107.1 94 57.4
ECA232G4388 Erigeron canadensis HOM05D006288 ORTHO05D007416 3.7e-21 105.1 77 66.2
THA.LOC104805112 Tarenaya hassleriana HOM05D006288 ORTHO05D007416 3.7e-21 105.1 83 57.8
MELO3C018910.2 Cucumis melo HOM05D006288 ORTHO05D007416 6.3e-21 104.4 89 59.6
Sed0021882 Sechium edule HOM05D006288 ORTHO05D007416 6.3e-21 104.4 84 61.9
ClCG07G016140 Citrullus lanatus HOM05D006288 ORTHO05D007416 8.3e-21 104.0 89 59.6
Os02g0190900 Oryza sativa ssp. japonica HOM05D006288 ORTHO05D007416 1.1e-20 103.6 92 55.4
CDE10G0042 Ceratophyllum demersum HOM05D006288 ORTHO05D007416 1.4e-20 103.2 89 56.2
FAN05G5526 Fragaria x ananassa HOM05D006288 ORTHO05D007416 3.1e-20 102.1 79 69.6
unitig_32.g10759 Utricularia gibba HOM05D006288 ORTHO05D007416 4.1e-20 101.7 92 53.3
Carub.0008s0943 Capsella rubella HOM05D006288 ORTHO05D007416 1.2e-19 100.1 84 57.1
Atru.BG.156.p Acer truncatum HOM05D006288 ORTHO05D007416 3.5e-19 98.6 68 70.6
FAN02G0987 Fragaria x ananassa HOM05D006288 ORTHO05D007416 3.5e-19 98.6 78 67.9
HanXRQChr15g0464891 Helianthus annuus HOM05D006288 ORTHO05D007416 3.5e-19 98.6 63 77.8
FAN09G1057 Fragaria x ananassa HOM05D010582 ORTHO05D007416 5.9e-19 97.8 74 66.2
Zm00001eb234970 Zea mays HOM05D006288 ORTHO05D007416 1.0e-18 97.1 84 53.6
Aa31LG7G12050 Aethionema arabicum HOM05D006288 ORTHO05D007416 2.2e-18 95.9 87 54.0
C07p39960 Brassica napus HOM05D006288 ORTHO05D007416 8.5e-18 94.0 94 50.0
BraA06t26742Z Brassica rapa HOM05D006288 ORTHO05D007416 8.5e-18 94.0 92 51.1
FvH4_6g46100 Fragaria vesca HOM05D006288 ORTHO05D007416 8.5e-18 94.0 73 69.9
HPP92_018391 Vanilla planifolia HOM05D006288 ORTHO05D007416 1.9e-17 92.8 92 53.3
BolC7t44529H Brassica oleracea HOM05D006288 ORTHO05D007416 2.5e-17 92.4 83 51.8
FvH4_6g24710 Fragaria vesca HOM05D006288 ORTHO05D007416 1.6e-16 89.7 59 74.6
FAN14G4004 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.6e-16 89.7 59 74.6
Thhalv10005135m.g Eutrema salsugineum HOM05D006288 ORTHO05D007416 4.7e-16 88.2 74 56.8
CARHR287980 Cardamine hirsuta HOM05D006288 ORTHO05D007416 6.1e-16 87.8 74 56.8
AT5G49550 Arabidopsis thaliana HOM05D006288 ORTHO05D007416 1.8e-15 86.3 72 56.9
BraA09t36127Z Brassica rapa HOM05D006288 ORTHO05D007416 1.8e-15 86.3 84 52.4
Sp2g19860 Schrenkiella parvula HOM05D006288 ORTHO05D007416 4.0e-15 85.1 71 56.3
AL8G23340 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 5.2e-15 84.7 74 54.1
A09p04890 Brassica napus HOM05D006288 ORTHO05D007416 5.2e-15 84.7 73 56.2
C09p05280 Brassica napus HOM05D006288 ORTHO05D007416 5.2e-15 84.7 82 52.4
AL954U10010 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 8.8e-15 84.0 72 55.6
BcaC04g23731 Brassica carinata HOM05D006288 ORTHO05D007416 8.8e-15 84.0 71 56.3
BcaB04g19620 Brassica carinata HOM05D006288 ORTHO05D007416 2.6e-14 82.4 73 53.4
Nitab4.5_0002249g0090 Nicotiana tabacum HOM05D006288 ORTHO05D007416 2.2e-13 79.3 49 75.5
Eucgr.K01979 Eucalyptus grandis HOM05D006288 ORTHO05D007416 2.8e-13 79.0 84 53.6
SHI46878 Sapria himalayana HOM05D006288 ORTHO05D007416 3.7e-13 78.6 76 44.7
Pp3c21_3840 Physcomitrium patens HOM05D006288 ORTHO05D007416 1.8e-12 76.3 76 51.3
Hma1.2p1_2186F.1_g316383 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 2.4e-12 75.9 49 71.4
Hma1.2p1_3488F.1_g336360 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 2.4e-12 75.9 49 71.4
DCAR_011002 Daucus carota HOM05D006288 ORTHO05D007416 5.4e-12 74.7 49 73.5
COL.COLO4_00228 Corchorus olitorius HOM05D006288 ORTHO05D007416 1.2e-11 73.6 49 73.5
Psat6g174640 Pisum sativum HOM05D006288 ORTHO05D007416 1.6e-11 73.2 46 73.9
Mapoly0015s0174 Marchantia polymorpha HOM05D006288 ORTHO05D007416 2.9e-10 68.9 92 34.8
AagrBONN_evm.TU.Sc2ySwM_344.2644 Anthoceros agrestis HOM05D006288 ORTHO05D007416 6.6e-10 67.8 74 41.9
Haze_03283 Corylus avellana HOM05D002280 ORTHO05D002322 3.6e-08 62.0 42 73.8
SMO358G0122 Selaginella moellendorffii HOM05D006288 ORTHO05D007416 5.7e-06 54.7 67 41.8


User provided reference genes

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