Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0297 Trochodendron aralioides HOM05D009698 ORTHO05D000385 1.3e-120 436.4 227 100.0
TAR625G0072 Trochodendron aralioides HOM05D009698 ORTHO05D000385 5.7e-47 191.8 99 93.9
TAR625G1047 Trochodendron aralioides HOM05D009698 ORTHO05D015199 1.3e-43 180.6 131 73.3
TAR626G1251 Trochodendron aralioides HOM05D009698 ORTHO05D000385 2.0e-23 113.6 67 82.1
TAR375G0735 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.2e-12 77.8 77 46.8
Lsat_1_v5_gn_9_120520 Lactuca sativa HOM05D001309 ORTHO05D005970 1.2e-09 67.8 98 37.8
HanXRQChr03g0064971 Helianthus annuus HOM05D001309 ORTHO05D005970 2.3e-08 63.5 105 36.2
TAR365G0123 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.1e-08 63.2 154 31.2
TAR622G0651 Trochodendron aralioides HOM05D000141 ORTHO05D000385 3.1e-08 63.2 154 31.2
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 4.0e-08 62.8 94 39.4
Lsat_1_v5_gn_9_120321 Lactuca sativa HOM05D005763 ORTHO05D005970 5.2e-08 62.4 98 36.7
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 8.9e-08 61.6 84 41.7
ECA240G1654 Erigeron canadensis HOM05D005763 ORTHO05D005970 1.5e-07 60.8 94 37.2
Lj5A265G37 Lonicera japonica HOM05D005763 ORTHO05D005970 1.5e-07 60.8 78 42.3
TAR369G0367 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.0e-07 60.5 82 39.0
TAR629G3448 Trochodendron aralioides HOM05D001163 ORTHO05D001769 2.0e-07 60.5 82 39.0
TAR365G0205 Trochodendron aralioides HOM05D000141 ORTHO05D000385 2.6e-07 60.1 150 31.3
TAR365G0008 Trochodendron aralioides HOM05D001163 ORTHO05D001769 3.4e-07 59.7 122 32.0
TAR627G0151 Trochodendron aralioides HOM05D000054 ORTHO05D000171 4.4e-07 59.3 80 41.2
TAR633G0853 Trochodendron aralioides HOM05D001163 ORTHO05D001769 4.4e-07 59.3 128 33.6
HanXRQChr03g0064951 Helianthus annuus HOM05D005763 ORTHO05D005970 7.5e-07 58.5 109 32.1
TAR383G0561 Trochodendron aralioides HOM05D001309 ORTHO05D000385 7.5e-07 58.5 148 31.1
TAR624G0746 Trochodendron aralioides HOM05D001309 ORTHO05D000385 7.5e-07 58.5 133 30.8
Os04g0610000 Oryza sativa ssp. japonica HOM05D001309 ORTHO05D000385 9.8e-07 58.2 62 43.5
Actinidia01605 Actinidia chinensis HOM05D001309 ORTHO05D005970 1.3e-06 57.8 78 37.2
Lj9A299T35 Lonicera japonica HOM05D001309 ORTHO05D000385 1.3e-06 57.8 94 36.2
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 1.7e-06 57.4 91 36.3
TAR375G0312 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.2e-06 57.0 72 41.7
TAR628G0437 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.2e-06 57.0 81 39.5
TAR629G1660 Trochodendron aralioides HOM05D000186 ORTHO05D001124 2.2e-06 57.0 81 38.3
CSS0018077 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.7e-06 56.2 102 30.4
CSS0030327 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.7e-06 56.2 97 30.9
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 4.9e-06 55.8 78 39.7
Nn3g20149 Nelumbo nucifera HOM05D001309 ORTHO05D000385 4.9e-06 55.8 95 37.9
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 4.9e-06 55.8 78 37.2
TAR622G0882 Trochodendron aralioides HOM05D030237 ORTHO05D000385 4.9e-06 55.8 76 39.5
vmacro01714 Vaccinium macrocarpon HOM05D005763 ORTHO05D005970 4.9e-06 55.8 84 39.3
TAR705G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 6.4e-06 55.5 130 30.8
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 8.3e-06 55.1 91 33.0
vmacro07151 Vaccinium macrocarpon HOM05D014212 ORTHO05D000385 8.3e-06 55.1 115 33.9


User provided reference genes

Program Settings