Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0282 Trochodendron aralioides HOM05D037372 ORTHO05D021137 3.5e-217 758.1 397 100.0
Dinv35096 Davidia involucrata HOM05D000924 ORTHO05D007614 5.4e-69 265.8 373 48.3
GSVIVG01032433001 Vitis vinifera HOM05D000924 ORTHO05D007614 9.3e-69 265.0 429 42.4
QL02p075347 Quercus lobata HOM05D000924 ORTHO05D007614 2.3e-59 233.8 408 40.4
CiPaw.03G041700 Carya illinoinensis HOM05D000924 ORTHO05D007614 6.6e-59 232.3 408 40.2
Thecc.04G014600 Theobroma cacao HOM05D000924 ORTHO05D007614 3.4e-55 219.9 387 38.8
Aqoxy3G02855 Aquilegia oxysepala HOM05D000924 ORTHO05D007614 1.0e-51 208.4 402 38.8
Nn3g16792 Nelumbo nucifera HOM05D037372 ORTHO05D021137 3.3e-50 203.4 397 40.1
Manes.17G114600 Manihot esculenta HOM05D000924 ORTHO05D007614 7.4e-50 202.2 405 37.0
Gorai.012G063400 Gossypium raimondii HOM05D000924 ORTHO05D007614 1.1e-48 198.4 396 37.1
Duzib147G1237 Durio zibethinus HOM05D000924 ORTHO05D007614 1.4e-48 198.0 397 35.8
Gohir.D04G056500 Gossypium hirsutum HOM05D000924 ORTHO05D007614 5.3e-48 196.1 396 36.9
Potri.001G348200 Populus trichocarpa HOM05D000924 ORTHO05D007614 5.8e-47 192.6 398 35.9
Ciclev10017496m.g Citrus clementina HOM05D000924 ORTHO05D007614 7.6e-47 192.2 422 36.7
Cfa007396 Carpinus fangiana HOM05D000924 ORTHO05D007614 2.9e-46 190.3 409 36.4
Cpa.g.sc108.48 Carica papaya HOM05D000924 ORTHO05D007614 1.9e-45 187.6 380 38.7
Prupe.3G288900 Prunus persica HOM05D000924 ORTHO05D007614 1.2e-44 184.9 402 38.1
Gohir.A05G357600 Gossypium hirsutum HOM05D000924 ORTHO05D007614 1.8e-43 181.0 396 34.3
PSO063G1343 Papaver somniferum HOM05D000924 ORTHO05D007614 3.0e-43 180.3 433 36.7
MD09G1029100 Malus domestica HOM05D000924 ORTHO05D007614 6.7e-43 179.1 414 36.7
Rhsim08G0052100 Rhododendron simsii HOM05D000924 ORTHO05D007614 9.6e-42 175.3 394 37.6
PSO832G0354 Papaver somniferum HOM05D000924 ORTHO05D007614 1.6e-41 174.5 439 35.8
Haze_14707 Corylus avellana HOM05D000924 ORTHO05D007614 6.9e-40 169.1 398 34.2
Sabra16G0227800 Salix brachista HOM05D000924 ORTHO05D007614 1.2e-39 168.3 395 33.7
vmacro18268 Vaccinium macrocarpon HOM05D000924 ORTHO05D021137 4.2e-37 159.8 252 43.7
MBI16_g05479_MAGBIO Magnolia biondii HOM05D000924 ORTHO05D007614 7.9e-36 155.6 408 34.6
Actinidia35761 Actinidia chinensis HOM05D000924 ORTHO05D007614 1.3e-35 154.8 394 36.3
CANSAT64G1924 Cannabis sativa HOM05D000924 ORTHO05D007614 1.8e-35 154.5 395 33.7
Lj7C596T1 Lonicera japonica HOM05D000924 ORTHO05D007614 1.8e-35 154.5 395 33.9
FAN09G2855 Fragaria x ananassa HOM05D000924 ORTHO05D007614 5.1e-35 152.9 394 34.0
FvH4_6g51100 Fragaria vesca HOM05D000924 ORTHO05D007614 6.7e-35 152.5 382 34.6
TWI36G1299 Tripterygium wilfordii HOM05D000924 ORTHO05D007614 6.7e-35 152.5 377 32.9
RcHm_v2.0_Chr2g0172661 Rosa chinensis HOM05D000924 ORTHO05D007614 8.7e-35 152.1 406 33.5
Atru.chr6.2351 Acer truncatum HOM05D000924 ORTHO05D007614 1.5e-34 151.4 391 34.3
Lalb_Chr10g0093731 Lupinus albus HOM05D000924 ORTHO05D007614 4.1e-32 143.3 408 30.6
Peaxi162Scf00129g00137 Petunia axillaris HOM05D000924 ORTHO05D007614 7.7e-31 139.0 400 32.5
Nn4g24978 Nelumbo nucifera HOM05D037372 ORTHO05D021137 1.7e-30 137.9 327 36.4
CAN.G1799.14 Capsicum annuum HOM05D000924 ORTHO05D007614 5.0e-30 136.3 394 31.5
Medtr7g075463 Medicago truncatula HOM05D000924 ORTHO05D007614 5.0e-30 136.3 418 29.9
Lj1g0013932 Lotus japonicus HOM05D000924 ORTHO05D007614 5.5e-29 132.9 395 32.2
Peaxi162Scf00304g00136 Petunia axillaris HOM05D000924 ORTHO05D007614 7.2e-29 132.5 399 31.8
COL.COLO4_29060 Corchorus olitorius HOM05D000924 ORTHO05D007614 1.2e-28 131.7 404 30.4
CSS0007254 Camellia sinensis var. sinensis HOM05D000924 ORTHO05D007614 4.6e-28 129.8 260 40.4
Cc07_g01890 Coffea canephora HOM05D000924 ORTHO05D007614 1.5e-26 124.8 376 31.9
Glyma.16G072300 Glycine max HOM05D000924 ORTHO05D007614 1.5e-26 124.8 408 31.9
ClCG00G002130 Citrullus lanatus HOM05D000924 ORTHO05D007614 2.0e-26 124.4 382 32.2
ClCG09G019150 Citrullus lanatus HOM05D000924 ORTHO05D007614 2.0e-26 124.4 382 32.2
Sed0024864 Sechium edule HOM05D000924 ORTHO05D007614 2.0e-26 124.4 236 38.6
Sc16g0003280 Simmondsia chinensis HOM05D000924 ORTHO05D021137 2.0e-26 124.4 394 29.7
Oeu057052.1 Olea europaea HOM05D000924 ORTHO05D007614 2.2e-25 120.9 269 32.0
Solyc02g086580.4 Solanum lycopersicum HOM05D000924 ORTHO05D007614 2.2e-25 120.9 394 31.7
Sopen02g031330 Solanum pennellii HOM05D000924 ORTHO05D007614 1.8e-24 117.9 394 31.5
Nitab4.5_0002682g0030 Nicotiana tabacum HOM05D000924 ORTHO05D007614 4.1e-24 116.7 370 30.5
TPR.G26947 Trifolium pratense HOM05D000924 ORTHO05D007614 5.3e-24 116.3 421 30.2
MELO3C021565.2 Cucumis melo HOM05D000924 ORTHO05D007614 9.1e-24 115.5 383 31.9
Nitab4.5_0009078g0030 Nicotiana tabacum HOM05D000924 ORTHO05D007614 1.2e-23 115.2 396 30.1
Sc16g0003250 Simmondsia chinensis HOM05D000924 ORTHO05D007614 2.0e-23 114.4 392 28.3
PGSC0003DMG402000479 Solanum tuberosum HOM05D000924 ORTHO05D007614 5.9e-23 112.8 395 29.9
Eucgr.J02227 Eucalyptus grandis HOM05D000924 ORTHO05D007614 6.5e-22 109.4 389 28.5
arahy.Tifrunner.gnm1.ann1.MJ9BA4 Arachis hypogaea HOM05D000924 ORTHO05D007614 3.2e-21 107.1 387 29.7
CsaV3_5G027240 Cucumis sativus L. HOM05D000924 ORTHO05D007614 1.0e-19 102.1 201 40.3
Ca_03851_v3 Cicer arietinum L. HOM05D000924 ORTHO05D007614 1.8e-19 101.3 411 28.5
Hund13858 Selenicereus undatus HOM05D000924 ORTHO05D007614 6.7e-19 99.4 403 27.5
Phvul.008G156500 Phaseolus vulgaris HOM05D000924 ORTHO05D007614 1.5e-18 98.2 410 29.5
AUR62012245 Chenopodium quinoa HOM05D000924 ORTHO05D007614 3.1e-16 90.5 401 28.9
Migut.L01012 Erythranthe guttata HOM05D000924 ORTHO05D007614 7.0e-16 89.4 262 32.4
Aa31LG2G4950 Aethionema arabicum HOM05D000924 ORTHO05D007614 1.2e-15 88.6 235 31.5
AUR62022876 Chenopodium quinoa HOM05D000924 ORTHO05D007614 2.2e-14 84.3 398 29.1
VMungo1383G1882 Vigna mungo HOM05D000924 ORTHO05D007614 2.2e-14 84.3 213 36.2
Psat3g114520 Pisum sativum HOM05D000924 ORTHO05D007614 2.9e-14 84.0 342 26.3
DCAR_021712 Daucus carota HOM05D000924 ORTHO05D007614 3.8e-14 83.6 267 30.7
ECA232G4622 Erigeron canadensis HOM05D000924 ORTHO05D007614 5.0e-14 83.2 376 26.9
SalBow8G2728 Salvia bowleyana HOM05D000924 ORTHO05D007614 1.5e-13 81.6 224 33.5
arahy.Tifrunner.gnm1.ann1.X9WBFE Arachis hypogaea HOM05D000924 ORTHO05D007614 1.9e-13 81.3 376 26.6
Lsat_1_v5_gn_4_183620 Lactuca sativa HOM05D000924 ORTHO05D007614 7.5e-10 69.3 240 29.6
SGA_v2.0_scaffold38G15026 Striga asiatica HOM05D000924 ORTHO05D007614 7.5e-10 69.3 150 36.7
FAN05G3590 Fragaria x ananassa HOM05D000924 ORTHO05D007614 1.7e-09 68.2 148 36.5
THA.LOC104805379 Tarenaya hassleriana HOM05D000924 ORTHO05D007614 2.2e-09 67.8 187 33.2
CDE06G2383 Ceratophyllum demersum HOM05D000924 ORTHO05D007614 2.8e-09 67.4 106 41.5
AL5G17170 Arabidopsis lyrata HOM05D000924 ORTHO05D007614 1.6e-07 61.6 233 28.8
Thhalv10003551m.g Eutrema salsugineum HOM05D000924 ORTHO05D007614 1.6e-07 61.6 233 27.5
HanXRQChr09g0255061 Helianthus annuus HOM05D000924 ORTHO05D007614 1.6e-07 61.6 234 27.8
CARHR149190 Cardamine hirsuta HOM05D000924 ORTHO05D007614 3.5e-07 60.5 252 27.4
EL10Ac2g04824 Beta vulgaris HOM05D000924 ORTHO05D007614 1.3e-06 58.5 356 24.7
Carub.0005s0628 Capsella rubella HOM05D000924 ORTHO05D007614 1.3e-06 58.5 252 27.4
C02p54450 Brassica napus HOM05D000924 ORTHO05D007614 3.8e-06 57.0 246 25.6
BraA02t08564Z Brassica rapa HOM05D000924 ORTHO05D007614 6.5e-06 56.2 246 25.2
BolC2t11507H Brassica oleracea HOM05D000924 ORTHO05D007614 8.5e-06 55.8 246 25.2


User provided reference genes

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