Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 1.2e-239 832.8 413 100.0
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 1.1e-152 543.9 347 79.0
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 8.5e-150 534.3 337 78.9
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 1.9e-149 533.1 340 79.1
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 4.7e-148 528.5 341 76.2
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 1.0e-147 527.3 344 76.7
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 2.3e-147 526.2 338 76.9
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 1.7e-145 520.0 340 76.2
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.1e-144 517.3 338 75.7
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 3.1e-144 515.8 322 78.3
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 9.1e-144 514.2 338 75.1
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 9.1e-144 514.2 338 75.1
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 1.2e-143 513.8 425 65.4
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 5.9e-143 511.5 335 77.0
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 1.3e-142 510.4 342 76.0
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 2.9e-142 509.2 338 76.6
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 5.0e-142 508.4 310 80.3
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 6.5e-142 508.1 337 76.0
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 1.9e-141 506.5 344 74.4
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.9e-141 506.5 337 75.7
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 3.2e-141 505.8 333 76.3
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 5.5e-141 505.0 339 75.5
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.6e-140 503.4 334 75.4
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 1.2e-138 497.3 332 73.2
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 2.0e-138 496.5 346 73.1
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 3.4e-138 495.7 335 74.3
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 7.5e-138 494.6 341 71.6
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 1.7e-137 493.4 333 73.9
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 2.8e-137 492.7 336 72.6
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 1.8e-136 490.0 346 74.0
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 2.4e-136 489.6 342 71.6
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 5.4e-136 488.4 352 73.9
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 7.0e-136 488.0 286 79.7
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 7.0e-136 488.0 336 75.0
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 2.0e-135 486.5 339 73.2
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 3.5e-135 485.7 294 80.3
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 3.5e-135 485.7 342 71.3
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 1.3e-134 483.8 352 73.0
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 1.3e-134 483.8 288 79.9
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 1.7e-134 483.4 337 73.0
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 2.2e-134 483.0 335 72.2
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 5.0e-134 481.9 307 78.5
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 2.5e-133 479.6 342 71.9
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 4.2e-133 478.8 321 75.1
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 1.2e-132 477.2 312 77.2
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 2.7e-132 476.1 341 70.4
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 3.6e-132 475.7 341 70.1
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 3.6e-132 475.7 337 71.5
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 4.7e-132 475.3 302 79.1
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 2.3e-131 473.0 300 74.7
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 5.2e-131 471.9 284 78.9
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 1.5e-130 470.3 339 70.8
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 5.7e-130 468.4 337 70.3
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 9.8e-130 467.6 337 70.6
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 1.3e-129 467.2 315 72.7
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 1.7e-129 466.8 383 64.2
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 8.3e-129 464.5 343 68.5
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 3.1e-128 462.6 337 68.2
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 7.0e-128 461.5 340 68.2
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 9.2e-128 461.1 312 73.1
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 1.6e-127 460.3 335 68.1
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 3.5e-127 459.1 321 70.7
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 3.5e-127 459.1 344 67.4
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 4.5e-127 458.8 337 69.7
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 5.9e-127 458.4 307 73.0
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 1.5e-125 453.8 313 72.2
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 1.5e-125 453.8 338 66.0
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 1.9e-125 453.4 285 75.8
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 1.9e-125 453.4 403 61.8
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 2.5e-125 453.0 313 71.6
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 9.5e-125 451.1 343 67.9
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 1.2e-124 450.7 315 71.7
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 8.0e-124 448.0 311 71.4
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 1.0e-123 447.6 315 71.1
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 1.4e-123 447.2 311 71.4
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 2.3e-123 446.4 311 71.1
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 1.5e-122 443.7 372 63.4
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 2.6e-122 443.0 342 65.2
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 5.7e-122 441.8 394 60.7
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 1.3e-121 440.7 329 66.9
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 3.7e-121 439.1 306 71.6
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 1.1e-120 437.6 327 67.9
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 7.0e-120 434.9 314 67.5
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 7.8e-119 431.4 310 69.0
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 1.2e-116 424.1 325 66.8
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 2.8e-116 422.9 445 52.8
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 1.0e-115 421.0 332 67.2
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 8.9e-115 417.9 280 74.3
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 1.2e-114 417.5 264 75.4
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 5.0e-110 402.1 263 71.9
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 5.6e-109 398.7 336 62.8
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 3.7e-105 386.0 310 63.9
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 4.6e-103 379.0 314 65.6
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 8.4e-97 358.2 328 60.1
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 2.4e-96 356.7 302 57.0
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 3.5e-95 352.8 345 57.1
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 6.4e-89 332.0 259 58.7
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 1.1e-88 331.3 275 60.0
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 3.9e-86 322.8 321 50.2
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 4.0e-83 312.8 254 58.3
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 4.9e-81 305.8 279 58.1
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 9.9e-74 281.6 159 78.0
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 1.9e-72 277.3 221 64.3
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 1.7e-65 254.2 147 83.0
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 2.0e-58 230.7 163 73.6
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 3.8e-57 226.5 135 80.7
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 1.6e-55 221.1 134 76.9
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 3.6e-55 219.9 282 45.4
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 4.3e-53 213.0 267 42.3
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 9.4e-48 195.3 134 65.7
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 1.7e-41 174.5 112 76.8
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 2.9e-33 147.1 316 29.4
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 1.9e-32 144.4 307 32.9
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 9.7e-29 132.1 320 31.9
Actinidia38386 Actinidia chinensis HOM05D004993 ORTHO05D008532 6.3e-20 102.8 84 64.3
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 2.5e-16 90.9 77 54.5
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 6.1e-15 86.3 99 48.5
Migut.G01033 Erythranthe guttata HOM05D004993 ORTHO05D008532 3.4e-13 80.5 54 66.7


User provided reference genes

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