Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0193 Trochodendron aralioides HOM05D007106 ORTHO05D007770 5.6e-43 177.2 88 100.0
TAR374G1315 Trochodendron aralioides HOM05D007106 ORTHO05D007770 1.2e-24 116.3 89 70.8
Dinv16657 Davidia involucrata HOM05D007106 ORTHO05D007770 3.8e-23 111.3 89 67.4
TAR622G1352 Trochodendron aralioides HOM05D007106 ORTHO05D007770 4.6e-21 104.4 80 68.8
Nn3g17263 Nelumbo nucifera HOM05D007106 ORTHO05D007770 7.9e-21 103.6 90 66.7
Haze_12000 Corylus avellana HOM05D007106 ORTHO05D007770 6.9e-17 90.5 86 57.0
Aqoxy3G03422 Aquilegia oxysepala HOM05D007106 ORTHO05D007770 1.0e-15 86.7 93 55.9
CSS0012235 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 2.5e-14 82.0 83 55.4
CSS0040002 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 3.2e-14 81.6 83 55.4
QL10p017125 Quercus lobata HOM05D007106 ORTHO05D007770 4.2e-14 81.3 84 53.6
Hma1.2p1_1936F.1_g308220 Hydrangea macrophylla HOM05D007106 ORTHO05D007770 7.9e-13 77.0 88 52.3
Hma1.2p1_2516F.1_g323695 Hydrangea macrophylla HOM05D007106 ORTHO05D007770 7.9e-13 77.0 88 52.3
Cfa018934 Carpinus fangiana HOM05D007106 ORTHO05D007770 3.0e-12 75.1 88 51.1
Manes.06G091700 Manihot esculenta HOM05D007106 ORTHO05D007770 5.1e-12 74.3 90 52.2
QL03p068707 Quercus lobata HOM05D007106 ORTHO05D007770 1.1e-11 73.2 87 50.6
Dinv38719 Davidia involucrata HOM05D007106 ORTHO05D007770 2.0e-11 72.4 91 52.7
GSVIVG01007993001 Vitis vinifera HOM05D007106 ORTHO05D007770 1.7e-10 69.3 82 50.0
Nn4g23194 Nelumbo nucifera HOM05D007106 ORTHO05D007770 2.2e-10 68.9 84 54.8
Actinidia19038 Actinidia chinensis HOM05D007106 ORTHO05D007770 4.8e-10 67.8 84 45.2
COL.COLO4_08636 Corchorus olitorius HOM05D007106 ORTHO05D007770 6.3e-10 67.4 80 45.0
CiPaw.11G045300 Carya illinoinensis HOM05D007106 ORTHO05D007770 8.2e-10 67.0 85 48.2
Gohir.D03G093700 Gossypium hirsutum HOM05D007106 ORTHO05D007770 8.2e-10 67.0 76 44.7
Gorai.003G097700 Gossypium raimondii HOM05D007106 ORTHO05D007770 8.2e-10 67.0 76 44.7
CiPaw.12G013000 Carya illinoinensis HOM05D007106 ORTHO05D007770 1.1e-09 66.6 78 50.0
Gohir.A03G067200 Gossypium hirsutum HOM05D007106 ORTHO05D007770 1.1e-09 66.6 76 44.7
Thecc.03G089800 Theobroma cacao HOM05D007106 ORTHO05D007770 1.1e-09 66.6 87 43.7
Oeu022764.1 Olea europaea HOM05D007106 ORTHO05D007770 1.4e-09 66.2 91 52.7
Actinidia35002 Actinidia chinensis HOM05D007106 ORTHO05D007770 6.9e-09 63.9 84 45.2
MD14G1201500 Malus domestica HOM05D007106 ORTHO05D007770 6.9e-09 63.9 82 42.7
Actinidia37624 Actinidia chinensis HOM05D007106 ORTHO05D007770 9.1e-09 63.5 79 50.6
Glyma.05G026000 Glycine max HOM05D007106 ORTHO05D007770 1.5e-08 62.8 86 47.7
Glyma.17G100900 Glycine max HOM05D007106 ORTHO05D007770 2.6e-08 62.0 86 45.3
Gohir.D07G070600 Gossypium hirsutum HOM05D007106 ORTHO05D007770 5.9e-08 60.8 81 42.0
Gorai.001G074500 Gossypium raimondii HOM05D007106 ORTHO05D007770 5.9e-08 60.8 81 42.0
Sed0016719 Sechium edule HOM05D007106 ORTHO05D007770 5.9e-08 60.8 79 44.3
Duzib205G0867 Durio zibethinus HOM05D007106 ORTHO05D007770 1.0e-07 60.1 83 42.2
Phvul.009G186700 Phaseolus vulgaris HOM05D007106 ORTHO05D007770 1.3e-07 59.7 88 44.3
Actinidia04893 Actinidia chinensis HOM05D007106 ORTHO05D007770 1.7e-07 59.3 84 48.8
Psat4g050160 Pisum sativum HOM05D007106 ORTHO05D007770 2.9e-07 58.5 80 46.2
Prupe.5G194500 Prunus persica HOM05D007106 ORTHO05D007770 2.9e-07 58.5 92 45.7
Cc11_g12880 Coffea canephora HOM05D007106 ORTHO05D007770 3.8e-07 58.2 77 39.0
ClCG04G012220 Citrullus lanatus HOM05D007106 ORTHO05D007770 5.0e-07 57.8 84 44.0
Gohir.A07G066100 Gossypium hirsutum HOM05D007106 ORTHO05D007770 5.0e-07 57.8 81 40.7
HanXRQChr17g0570821 Helianthus annuus HOM05D021717 ORTHO05D022533 5.0e-07 57.8 85 42.4
Manes.14G078900 Manihot esculenta HOM05D007106 ORTHO05D007770 5.0e-07 57.8 89 40.4
Aqoxy3G00484 Aquilegia oxysepala HOM05D007106 ORTHO05D007770 8.5e-07 57.0 67 46.3
Lj4g0015417 Lotus japonicus HOM05D007106 ORTHO05D007770 1.1e-06 56.6 86 40.7
RcHm_v2.0_Chr7g0181551 Rosa chinensis HOM05D007106 ORTHO05D007770 1.1e-06 56.6 84 44.0
CSS0008414 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 1.4e-06 56.2 78 44.9
CDE04G1322 Ceratophyllum demersum HOM05D007106 ORTHO05D007770 1.4e-06 56.2 82 42.7
ATR0564G057 Amborella trichopoda HOM05D007106 ORTHO05D007770 1.9e-06 55.8 80 41.2
HanXRQChr12g0380811 Helianthus annuus HOM05D021717 ORTHO05D022533 2.5e-06 55.5 91 39.6
Rhsim12G0155900 Rhododendron simsii HOM05D007106 ORTHO05D007770 2.5e-06 55.5 87 41.4
vmacro17537 Vaccinium macrocarpon HOM05D007106 ORTHO05D007770 2.5e-06 55.5 85 45.9
ECA234G3064 Erigeron canadensis HOM05D021717 ORTHO05D022533 4.2e-06 54.7 90 40.0
MD06G1194400 Malus domestica HOM05D007106 ORTHO05D007770 4.2e-06 54.7 78 42.3
MELO3C001986.2 Cucumis melo HOM05D007106 ORTHO05D007770 7.2e-06 53.9 83 43.4
Cpa.g.sc423.1 Carica papaya HOM05D007106 ORTHO05D007770 9.4e-06 53.5 85 42.4
Glyma.04G168400 Glycine max HOM05D007106 ORTHO05D007770 9.4e-06 53.5 90 43.3
Psat5g199960 Pisum sativum HOM05D007106 ORTHO05D007770 9.4e-06 53.5 90 41.1


User provided reference genes

Program Settings