Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0105 Trochodendron aralioides HOM05D005478 ORTHO05D006426 1.1e-90 336.7 178 100.0
TAR629G3442 Trochodendron aralioides HOM05D005478 ORTHO05D006426 4.5e-55 218.4 179 72.6
GSVIVG01032384001 Vitis vinifera HOM05D005478 ORTHO05D006426 3.3e-50 202.2 178 57.9
Nn3g16686 Nelumbo nucifera HOM05D005478 ORTHO05D006426 2.2e-46 189.5 178 61.2
Ciclev10016916m.g Citrus clementina HOM05D005478 ORTHO05D006426 1.1e-42 177.2 178 62.9
Hma1.2p1_0818F.1_g223270 Hydrangea macrophylla HOM05D005478 ORTHO05D006426 2.5e-42 176.0 183 51.9
Atru.chr6.2431 Acer truncatum HOM05D005478 ORTHO05D006426 2.8e-41 172.6 172 61.6
QL02p074001 Quercus lobata HOM05D005478 ORTHO05D006426 4.8e-41 171.8 169 54.4
TWI36G1604 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 4.0e-40 168.7 176 55.1
CiPaw.03G045600 Carya illinoinensis HOM05D005478 ORTHO05D006426 3.8e-38 162.2 190 48.9
ClCG10G013780 Citrullus lanatus HOM05D005478 ORTHO05D006426 4.9e-38 161.8 179 47.5
Actinidia18441 Actinidia chinensis HOM05D005478 ORTHO05D006426 1.1e-37 160.6 183 49.7
TWI12G0237 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 1.6e-36 156.8 176 49.4
COL.COLO4_30424 Corchorus olitorius HOM05D005478 ORTHO05D006426 2.7e-36 156.0 187 48.1
TWI56G0849 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 4.6e-36 155.2 175 47.4
CANSAT64G0255 Cannabis sativa HOM05D005478 ORTHO05D006426 1.8e-35 153.3 181 51.4
unitig_88.g27693 Utricularia gibba HOM05D000631 ORTHO05D000524 1.8e-35 153.3 181 48.1
Cpa.g.sc108.77 Carica papaya HOM05D005478 ORTHO05D006426 2.3e-35 152.9 191 46.1
CsaV3_3G042880 Cucumis sativus L. HOM05D005478 ORTHO05D006426 3.0e-35 152.5 181 45.9
Cfa007338 Carpinus fangiana HOM05D005478 ORTHO05D006426 3.9e-35 152.1 185 53.0
Prupe.3G293900 Prunus persica HOM05D005478 ORTHO05D006426 3.9e-35 152.1 189 46.6
MELO3C026588.2 Cucumis melo HOM05D005478 ORTHO05D006426 8.7e-35 151.0 179 45.8
Actinidia36124 Actinidia chinensis HOM05D005478 ORTHO05D006426 1.9e-34 149.8 189 47.1
Haze_14759 Corylus avellana HOM05D005478 ORTHO05D006426 1.9e-34 149.8 187 51.9
Potri.001G343200 Populus trichocarpa HOM05D005478 ORTHO05D006426 4.3e-34 148.7 173 51.4
Rhsim10G0014600 Rhododendron simsii HOM05D005478 ORTHO05D006426 7.4e-34 147.9 182 53.3
Glyma.05G002400 Glycine max HOM05D005478 ORTHO05D006426 1.3e-33 147.1 168 48.8
Oeu033728.1 Olea europaea HOM05D005478 ORTHO05D006426 1.6e-33 146.7 188 53.2
Sed0022021 Sechium edule HOM05D005478 ORTHO05D006426 1.6e-33 146.7 180 44.4
MSTRG.3284 Avicennia marina HOM05D005478 ORTHO05D006426 2.8e-33 146.0 186 48.4
CiPaw.04G029700 Carya illinoinensis HOM05D005478 ORTHO05D006426 2.8e-33 146.0 188 47.3
Duzib160G0719 Durio zibethinus HOM05D005478 ORTHO05D006426 2.8e-33 146.0 183 44.3
Sabra16G0222600 Salix brachista HOM05D005478 ORTHO05D006426 1.1e-32 144.1 173 49.1
Duzib235G1061 Durio zibethinus HOM05D005478 ORTHO05D006426 1.4e-32 143.7 186 45.7
Hund15527 Selenicereus undatus HOM05D005478 ORTHO05D006426 1.8e-32 143.3 178 45.5
Duzib192G0894 Durio zibethinus HOM05D005478 ORTHO05D006426 5.3e-32 141.7 182 47.8
AUR62028419 Chenopodium quinoa HOM05D005478 ORTHO05D006426 1.5e-31 140.2 185 43.2
Thecc.06G091700 Theobroma cacao HOM05D005478 ORTHO05D006426 2.0e-31 139.8 188 44.7
Medtr6g004420 Medicago truncatula HOM05D005478 ORTHO05D006426 2.6e-31 139.4 168 47.0
MSTRG.15534 Avicennia marina HOM05D005478 ORTHO05D006426 1.0e-30 137.5 186 45.7
MBI14_g36718_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 1.7e-30 136.7 172 53.5
PGR142G0633 Punica granatum HOM05D005478 ORTHO05D006426 1.7e-30 136.7 187 42.8
AUR62041940 Chenopodium quinoa HOM05D005478 ORTHO05D006426 3.8e-30 135.6 185 43.2
ATR0824G160 Amborella trichopoda HOM05D005478 ORTHO05D006426 5.0e-30 135.2 170 42.4
Actinidia05981 Actinidia chinensis HOM05D005478 ORTHO05D006426 8.5e-30 134.4 172 48.3
arahy.Tifrunner.gnm1.ann1.47572L Arachis hypogaea HOM05D005478 ORTHO05D006426 1.9e-29 133.3 184 46.7
MD09G1022900 Malus domestica HOM05D005478 ORTHO05D006426 1.9e-29 133.3 192 40.6
SGA_v2.0_scaffold47G17517 Striga asiatica HOM05D005478 ORTHO05D006426 1.9e-29 133.3 183 43.7
PSO478G1356 Papaver somniferum HOM05D005478 ORTHO05D006426 2.5e-29 132.9 181 43.6
TPR.G31952 Trifolium pratense HOM05D005478 ORTHO05D006426 3.2e-29 132.5 169 47.9
Ca_04142_v3 Cicer arietinum L. HOM05D005478 ORTHO05D006426 7.2e-29 131.3 171 47.4
Lalb_Chr22g0360721 Lupinus albus HOM05D005478 ORTHO05D006426 7.2e-29 131.3 183 41.0
VMungo0464G1533 Vigna mungo HOM05D005478 ORTHO05D006426 7.2e-29 131.3 169 42.0
Thhalv10004961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 9.3e-29 131.0 182 40.7
Migut.K01412 Erythranthe guttata HOM05D005478 ORTHO05D006426 1.6e-28 130.2 188 42.0
CSS0007505 Camellia sinensis var. sinensis HOM05D005478 ORTHO05D006426 2.1e-28 129.8 184 47.3
vmacro05877 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 2.1e-28 129.8 215 44.7
Thhalv10027961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 2.7e-28 129.4 177 42.4
Solyc02g093450.3 Solanum lycopersicum HOM05D005478 ORTHO05D006426 2.7e-28 129.4 182 44.0
Sp2g16690 Schrenkiella parvula HOM05D005478 ORTHO05D006426 3.6e-28 129.0 183 41.5
PSO017G4510 Papaver somniferum HOM05D005478 ORTHO05D006426 4.6e-28 128.6 180 43.3
Sopen02g038220 Solanum pennellii HOM05D005478 ORTHO05D006426 6.1e-28 128.3 182 43.4
Aa31LG2G5140 Aethionema arabicum HOM05D005478 ORTHO05D006426 1.0e-27 127.5 189 40.2
CARHR148890 Cardamine hirsuta HOM05D005478 ORTHO05D006426 1.0e-27 127.5 181 42.0
Lj2g0025845 Lotus japonicus HOM05D005478 ORTHO05D006426 1.3e-27 127.1 171 49.7
Manes.17G111100 Manihot esculenta HOM05D005478 ORTHO05D006426 1.3e-27 127.1 175 45.7
Sc07g0003180 Simmondsia chinensis HOM05D005478 ORTHO05D006426 1.8e-27 126.7 171 42.1
MD17G1022200 Malus domestica HOM05D005478 ORTHO05D006426 3.0e-27 125.9 194 39.2
Gohir.A09G082300 Gossypium hirsutum HOM05D005478 ORTHO05D006426 3.9e-27 125.6 182 42.3
Oeu048609.1 Olea europaea HOM05D005478 ORTHO05D006426 3.9e-27 125.6 186 49.5
Gohir.D09G082100 Gossypium hirsutum HOM05D005478 ORTHO05D006426 5.1e-27 125.2 182 42.9
Gorai.006G097900 Gossypium raimondii HOM05D005478 ORTHO05D006426 6.7e-27 124.8 181 42.5
Lsat_1_v5_gn_0_18280 Lactuca sativa HOM05D005478 ORTHO05D006426 6.7e-27 124.8 175 44.6
Psat1g053440 Pisum sativum HOM05D005478 ORTHO05D006426 6.7e-27 124.8 173 45.1
Eucgr.I01730 Eucalyptus grandis HOM05D005478 ORTHO05D006426 8.8e-27 124.4 180 45.6
arahy.Tifrunner.gnm1.ann1.WAXE9D Arachis hypogaea HOM05D005478 ORTHO05D006426 1.1e-26 124.0 202 44.1
Glyma.19G002600 Glycine max HOM05D005478 ORTHO05D006426 1.5e-26 123.6 170 40.6
PGSC0003DMG400012636 Solanum tuberosum HOM05D005478 ORTHO05D006426 1.9e-26 123.2 184 42.4
FAN05G2721 Fragaria x ananassa HOM05D005478 ORTHO05D006426 2.5e-26 122.9 186 40.9
AL5G16940 Arabidopsis lyrata HOM05D005478 ORTHO05D006426 5.7e-26 121.7 182 37.9
Lsat_1_v5_gn_2_91160 Lactuca sativa HOM05D005478 ORTHO05D006426 5.7e-26 121.7 175 50.3
Phvul.004G004600 Phaseolus vulgaris HOM05D005478 ORTHO05D006426 7.4e-26 121.3 171 48.5
SGA_v2.0_scaffold30G12408 Striga asiatica HOM05D005478 ORTHO05D006426 7.4e-26 121.3 183 48.6
THA.LOC104825319 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 7.4e-26 121.3 180 38.9
DCAR_011260 Daucus carota HOM05D005478 ORTHO05D006426 1.3e-25 120.6 176 43.8
FAN02G1690 Fragaria x ananassa HOM05D005478 ORTHO05D006426 1.3e-25 120.6 186 40.3
FAN14G4849 Fragaria x ananassa HOM05D005478 ORTHO05D006426 1.3e-25 120.6 188 39.9
HanXRQChr07g0199031 Helianthus annuus HOM05D005478 ORTHO05D006426 1.3e-25 120.6 173 50.3
FvH4_6g51790 Fragaria vesca HOM05D005478 ORTHO05D006426 1.7e-25 120.2 188 39.9
FAN09G1593 Fragaria x ananassa HOM05D005478 ORTHO05D006426 1.7e-25 120.2 188 39.9
Carub.0005s0595 Capsella rubella HOM05D005478 ORTHO05D006426 4.8e-25 118.6 188 39.9
A09p03440 Brassica napus HOM05D005478 ORTHO05D006426 8.2e-25 117.9 175 39.4
PSO754G0087 Papaver somniferum HOM05D005478 ORTHO05D006426 8.2e-25 117.9 170 40.0
BraA09t35982Z Brassica rapa HOM05D005478 ORTHO05D006426 1.4e-24 117.1 175 38.9
Lalb_Chr24g0403571 Lupinus albus HOM05D005478 ORTHO05D006426 1.8e-24 116.7 182 43.4
Peaxi162Scf00700g00430 Petunia axillaris HOM05D005478 ORTHO05D006426 1.8e-24 116.7 179 38.0
BcaB04g19441 Brassica carinata HOM05D005478 ORTHO05D006426 2.4e-24 116.3 177 39.0
BcaC04g23900 Brassica carinata HOM05D005478 ORTHO05D006426 2.4e-24 116.3 175 40.0
C09p03650 Brassica napus HOM05D005478 ORTHO05D006426 2.4e-24 116.3 175 40.0
CDE09G0806 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 2.4e-24 116.3 183 37.2
PSO063G0871 Papaver somniferum HOM05D005478 ORTHO05D006426 2.4e-24 116.3 170 38.8
Ah.02g128220 Amaranthus hybridus HOM05D005478 ORTHO05D006426 9.1e-24 114.4 178 42.1
BolC9t53284H Brassica oleracea HOM05D005478 ORTHO05D006426 9.1e-24 114.4 174 39.1
HPP92_006182 Vanilla planifolia HOM05D005478 ORTHO05D006426 9.1e-24 114.4 168 36.9
Aqoxy5G03740 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 5.9e-23 111.7 185 37.3
RcHm_v2.0_Chr2g0173291 Rosa chinensis HOM05D005478 ORTHO05D006426 5.9e-23 111.7 186 37.1
BcaC06g30982 Brassica carinata HOM05D005478 ORTHO05D006426 1.0e-22 110.9 181 38.7
C07p36630 Brassica napus HOM05D005478 ORTHO05D006426 1.0e-22 110.9 179 37.4
vmacro18294 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 1.7e-22 110.2 223 40.4
A06p41110 Brassica napus HOM05D005478 ORTHO05D006426 2.9e-22 109.4 175 37.1
BraA06t27034Z Brassica rapa HOM05D005478 ORTHO05D006426 2.9e-22 109.4 175 37.1
CDE02G4674 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 5.0e-22 108.6 181 34.3
AT3G27520 Arabidopsis thaliana HOM05D005478 ORTHO05D006426 1.1e-21 107.5 183 36.1
ECA238G3024 Erigeron canadensis HOM05D005478 ORTHO05D006426 1.9e-21 106.7 173 39.3
BolC7t44179H Brassica oleracea HOM05D005478 ORTHO05D006426 3.2e-21 105.9 179 36.9
HanXRQChr14g0451171 Helianthus annuus HOM05D005478 ORTHO05D006426 3.2e-21 105.9 173 43.9
BcaC06g33809 Brassica carinata HOM05D005478 ORTHO05D006426 4.2e-21 105.5 179 36.9
SEGI_00200 Sequoiadendron giganteum HOM05D005478 ORTHO05D006426 1.6e-20 103.6 161 37.3
Aqoxy1G02464 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 6.1e-20 101.7 165 39.4
Nn3g16214 Nelumbo nucifera HOM05D005478 ORTHO05D006426 5.7e-18 95.1 89 55.1
Dinv25725 Davidia involucrata HOM05D005478 ORTHO05D006426 1.7e-17 93.6 132 52.3
THA.LOC104825211 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 1.4e-16 90.5 127 40.2
EL10Ac6g14100 Beta vulgaris HOM05D005478 ORTHO05D006426 6.5e-14 81.6 129 51.2
Cc07_g01510 Coffea canephora HOM05D005478 ORTHO05D006426 4.2e-13 79.0 93 45.2
Os02g0595300 Oryza sativa ssp. japonica HOM05D005478 ORTHO05D006426 4.7e-12 75.5 180 36.1
Lju41C43G9 Lonicera japonica HOM05D005478 ORTHO05D006426 3.0e-11 72.8 126 49.2
MBI10_g11211_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 5.2e-11 72.0 170 33.5
Gohir.D05G130900 Gossypium hirsutum HOM05D005478 ORTHO05D006426 1.5e-10 70.5 110 39.1
MBI07_g39476_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 2.6e-10 69.7 53 60.4
Zm00001eb183740 Zea mays HOM05D044595 ORTHO05D006426 3.7e-09 65.9 160 27.5
Nitab4.5_0005593g0050 Nicotiana tabacum HOM05D005478 ORTHO05D006426 1.1e-08 64.3 155 30.3
Dinv33426 Davidia involucrata HOM05D005478 ORTHO05D006426 1.4e-08 63.9 49 59.2
Oeu018990.1 Olea europaea HOM05D005478 ORTHO05D006426 1.4e-08 63.9 103 50.5
Nn8g38687 Nelumbo nucifera HOM05D046178 ORTHO05D006426 7.0e-08 61.6 66 47.0
SHI03806 Sapria himalayana HOM05D005478 ORTHO05D006426 1.6e-07 60.5 120 33.3
Actinidia35779 Actinidia chinensis HOM05D005478 ORTHO05D006426 5.9e-07 58.5 144 36.1
Nitab4.5_0000326g0190 Nicotiana tabacum HOM05D006502 ORTHO05D007704 7.7e-07 58.2 50 52.0
Gorai.009G134600 Gossypium raimondii HOM05D005478 ORTHO05D006426 8.5e-06 54.7 35 68.6


User provided reference genes

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