Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0090 Trochodendron aralioides HOM05D008333 ORTHO05D010371 2.6e-74 282.0 143 100.0
TAR481G0008 Trochodendron aralioides HOM05D008333 ORTHO05D010371 6.8e-38 161.0 121 67.8
TAR481G0013 Trochodendron aralioides HOM05D008333 ORTHO05D010371 8.9e-38 160.6 121 67.8
Nn4g23042 Nelumbo nucifera HOM05D008333 ORTHO05D010371 2.8e-23 112.5 110 56.4
Nn3g17126 Nelumbo nucifera HOM05D008333 ORTHO05D010371 6.4e-20 101.3 125 44.8
Gohir.A09G021000 Gossypium hirsutum HOM05D008333 ORTHO05D010371 1.6e-15 86.7 123 36.6
COL.COLO4_25183 Corchorus olitorius HOM05D008333 ORTHO05D010371 3.6e-15 85.5 118 37.3
Potri.017G077100 Populus trichocarpa HOM05D008333 ORTHO05D010371 6.2e-15 84.7 111 41.4
Gorai.006G024100 Gossypium raimondii HOM05D008333 ORTHO05D010371 1.1e-14 84.0 123 36.6
Thecc.04G074300 Theobroma cacao HOM05D008333 ORTHO05D010371 4.0e-14 82.0 96 40.6
Duzib147G0630 Durio zibethinus HOM05D008333 ORTHO05D010371 2.0e-13 79.7 113 36.3
Gohir.D09G020400 Gossypium hirsutum HOM05D008333 ORTHO05D010371 3.4e-13 79.0 123 35.8
Gorai.006G023800 Gossypium raimondii HOM05D008333 ORTHO05D010371 5.8e-13 78.2 106 39.6
Gorai.007G297900 Gossypium raimondii HOM05D008333 ORTHO05D010371 1.7e-12 76.6 134 30.6
CSS0029447 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 3.7e-12 75.5 126 35.7
CSS0048142 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 3.7e-12 75.5 126 35.7
Haze_14585 Corylus avellana HOM05D008333 ORTHO05D010371 3.7e-12 75.5 136 35.3
Gohir.D11G275775 Gossypium hirsutum HOM05D008333 ORTHO05D010371 4.9e-12 75.1 120 32.5
Cfa021167 Carpinus fangiana HOM05D008333 ORTHO05D010371 4.1e-11 72.0 105 38.1
Cfa007508 Carpinus fangiana HOM05D008333 ORTHO05D010371 9.2e-11 70.9 114 39.5
Prupe.3G272200 Prunus persica HOM05D008333 ORTHO05D010371 1.2e-10 70.5 110 35.5
FvH4_6g49300 Fragaria vesca HOM05D008333 ORTHO05D010371 2.1e-10 69.7 104 33.7
FAN14G1695 Fragaria x ananassa HOM05D008333 ORTHO05D010371 2.1e-10 69.7 104 33.7
FAN14G3781 Fragaria x ananassa HOM05D000349 ORTHO05D001782 2.1e-10 69.7 104 33.7
Actinidia38746 Actinidia chinensis HOM05D008333 ORTHO05D010371 4.6e-10 68.6 98 38.8
CiPaw.03G030300 Carya illinoinensis HOM05D008333 ORTHO05D010371 4.6e-10 68.6 104 33.7
QL02p080535 Quercus lobata HOM05D008333 ORTHO05D010371 4.6e-10 68.6 105 37.1
FvH4_6g49320 Fragaria vesca HOM05D008333 ORTHO05D010371 7.8e-10 67.8 104 33.7
FAN14G5614 Fragaria x ananassa HOM05D008333 ORTHO05D010371 7.8e-10 67.8 104 33.7
Manes.17G020900 Manihot esculenta HOM05D008333 ORTHO05D010371 7.8e-10 67.8 120 35.8
Gohir.D09G020550 Gossypium hirsutum HOM05D008333 ORTHO05D010371 1.7e-09 66.6 89 38.2
MBI03_g33921_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 5.1e-09 65.1 105 39.0
Eucgr.I01914 Eucalyptus grandis HOM05D008333 ORTHO05D010371 1.5e-08 63.5 114 32.5
Eucgr.I01916 Eucalyptus grandis HOM05D008333 ORTHO05D010371 1.9e-08 63.2 114 31.6
Eucgr.L02760 Eucalyptus grandis HOM05D008333 ORTHO05D010371 3.3e-08 62.4 114 31.6
Gohir.A11G265601 Gossypium hirsutum HOM05D008333 ORTHO05D010371 7.3e-08 61.2 95 33.7
MBI18_g41917_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 9.5e-08 60.8 124 35.5
RcHm_v2.0_Chr2g0169181 Rosa chinensis HOM05D008333 ORTHO05D010371 1.6e-07 60.1 105 31.4
Lj7P401T71 Lonicera japonica HOM05D008333 ORTHO05D010371 3.6e-07 58.9 117 33.3
MBI05_g05683_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 4.7e-07 58.5 116 37.9
MBI18_g01155_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 1.1e-06 57.4 118 36.4
MBI03_g32214_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 2.4e-06 56.2 106 38.7
Os06g0580100 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 2.4e-06 56.2 114 32.5
Glyma.18G255500 Glycine max HOM05D008333 ORTHO05D010371 3.1e-06 55.8 119 28.6
MBI05_g28284_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D010887 3.1e-06 55.8 109 38.5
Phvul.004G025900 Phaseolus vulgaris HOM05D008333 ORTHO05D010371 8.9e-06 54.3 119 27.7


User provided reference genes

Program Settings