Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G0046 Trochodendron aralioides HOM05D007913 ORTHO05D009599 1.0e-57 226.5 114 100.0
TAR629G2111 Trochodendron aralioides HOM05D007913 ORTHO05D009599 3.5e-37 158.3 109 75.2
TAR374G0796 Trochodendron aralioides HOM05D007913 ORTHO05D009599 2.3e-28 129.0 112 61.6
TAR362G0928 Trochodendron aralioides HOM05D007913 ORTHO05D009599 2.4e-22 109.0 59 93.2
MBI10_g16032_MAGBIO Magnolia biondii HOM05D007913 ORTHO05D009599 7.8e-21 104.0 128 51.6
MBI16_g11028_MAGBIO Magnolia biondii HOM05D007913 ORTHO05D009599 1.7e-20 102.8 129 50.4
Nn4g23816 Nelumbo nucifera HOM05D007913 ORTHO05D009599 1.6e-18 96.3 125 53.6
Ciclev10033073m.g Citrus clementina HOM05D007913 ORTHO05D009599 1.4e-17 93.2 120 52.5
Nn3g17821 Nelumbo nucifera HOM05D007913 ORTHO05D009599 2.4e-17 92.4 115 52.2
Rhsim09G0108800 Rhododendron simsii HOM05D007913 ORTHO05D009599 6.9e-17 90.9 117 50.4
Dinv04476 Davidia involucrata HOM05D007913 ORTHO05D009599 2.0e-16 89.4 110 50.0
Dinv21098 Davidia involucrata HOM05D007913 ORTHO05D009599 9.9e-16 87.0 89 56.2
Oeu039264.1 Olea europaea HOM05D007913 ORTHO05D009599 1.7e-15 86.3 116 50.9
Atru.chr11.1276 Acer truncatum HOM05D007913 ORTHO05D009599 4.9e-15 84.7 118 46.6
Prupe.1G309800 Prunus persica HOM05D007913 ORTHO05D009599 8.4e-15 84.0 112 49.1
Rhsim09G0108600 Rhododendron simsii HOM05D007913 ORTHO05D009599 1.4e-14 83.2 117 50.4
Aqoxy3G00317 Aquilegia oxysepala HOM05D007913 ORTHO05D009599 1.9e-14 82.8 113 46.9
Thecc.02G356200 Theobroma cacao HOM05D007913 ORTHO05D009599 1.9e-14 82.8 106 50.9
Cc00_g12370 Coffea canephora HOM05D007913 ORTHO05D009599 4.2e-14 81.6 125 42.4
Hma1.2p1_0061F.1_g034050 Hydrangea macrophylla HOM05D007913 ORTHO05D009599 4.2e-14 81.6 116 50.9
Oeu009783.1 Olea europaea HOM05D007913 ORTHO05D009599 9.3e-14 80.5 115 48.7
Haze_06128 Corylus avellana HOM05D003281 ORTHO05D004128 1.2e-13 80.1 113 50.4
QL01p043366 Quercus lobata HOM05D007913 ORTHO05D009599 2.1e-13 79.3 111 49.5
Actinidia14885 Actinidia chinensis HOM05D007913 ORTHO05D009599 2.7e-13 79.0 123 48.8
Nitab4.5_0000874g0150 Nicotiana tabacum HOM05D007913 ORTHO05D009599 2.7e-13 79.0 117 42.7
Nitab4.5_0003330g0030 Nicotiana tabacum HOM05D007913 ORTHO05D009599 3.5e-13 78.6 113 44.2
Nitab4.5_0003330g0020 Nicotiana tabacum HOM05D007913 ORTHO05D009599 6.0e-13 77.8 122 40.2
COL.COLO4_07914 Corchorus olitorius HOM05D007913 ORTHO05D009599 3.0e-12 75.5 113 49.6
PGSC0003DMG400014558 Solanum tuberosum HOM05D007913 ORTHO05D009599 6.7e-12 74.3 122 41.8
Oeu027679.1 Olea europaea HOM05D007913 ORTHO05D009599 1.1e-11 73.6 113 45.1
Oeu027681.1 Olea europaea HOM05D007913 ORTHO05D009599 1.1e-11 73.6 113 45.1
Duzib251G0161 Durio zibethinus HOM05D013794 ORTHO05D009599 1.5e-11 73.2 115 47.8
Potri.010G125900 Populus trichocarpa HOM05D007913 ORTHO05D009599 1.5e-11 73.2 109 45.0
CiPaw.16G064300 Carya illinoinensis HOM05D007913 ORTHO05D009599 1.9e-11 72.8 124 43.5
Actinidia18937 Actinidia chinensis HOM05D010627 ORTHO05D009599 2.5e-11 72.4 115 46.1
MSTRG.2241 Avicennia marina HOM05D007913 ORTHO05D009599 2.5e-11 72.4 116 44.0
Potri.008G119900 Populus trichocarpa HOM05D013794 ORTHO05D009599 2.5e-11 72.4 116 46.6
Nitab4.5_0000057g0320 Nicotiana tabacum HOM05D007913 ORTHO05D009599 3.3e-11 72.0 121 41.3
Duzib268G1152 Durio zibethinus HOM05D013794 ORTHO05D009599 4.3e-11 71.6 116 45.7
Nitab4.5_0000874g0170 Nicotiana tabacum HOM05D007913 ORTHO05D009599 4.3e-11 71.6 116 43.1
Duzib248G0949 Durio zibethinus HOM05D013794 ORTHO05D009599 5.6e-11 71.2 112 46.4
CSS0025071 Camellia sinensis var. sinensis HOM05D007913 ORTHO05D009599 7.4e-11 70.9 84 56.0
Migut.E00331 Erythranthe guttata HOM05D007913 ORTHO05D009599 7.4e-11 70.9 115 41.7
vmacro16450 Vaccinium macrocarpon HOM05D010627 ORTHO05D009599 7.4e-11 70.9 118 42.4
CSS0042752 Camellia sinensis var. sinensis HOM05D052657 ORTHO05D016853 9.6e-11 70.5 119 46.2
Migut.E00332 Erythranthe guttata HOM05D007913 ORTHO05D009599 9.6e-11 70.5 119 47.9
Sopen05g005290 Solanum pennellii HOM05D007913 ORTHO05D009599 1.3e-10 70.1 124 39.5
Actinidia35085 Actinidia chinensis HOM05D010627 ORTHO05D013125 2.1e-10 69.3 111 45.9
CSS0038924 Camellia sinensis var. sinensis HOM05D052657 ORTHO05D016853 2.1e-10 69.3 119 46.2
Aqoxy3G00316 Aquilegia oxysepala HOM05D007913 ORTHO05D009599 2.8e-10 68.9 129 38.8
DCAR_030070 Daucus carota HOM05D007913 ORTHO05D009599 2.8e-10 68.9 110 45.5
Cfa000683 Carpinus fangiana HOM05D007913 ORTHO05D009599 3.6e-10 68.6 110 48.2
Manes.14G101600 Manihot esculenta HOM05D007913 ORTHO05D009599 3.6e-10 68.6 94 45.7
Sabra08G0090900 Salix brachista HOM05D013794 ORTHO05D009599 3.6e-10 68.6 115 46.1
Hma1.2p1_1001F.1_g246480 Hydrangea macrophylla HOM05D007913 ORTHO05D009599 8.1e-10 67.4 80 52.5
MSTRG.13524 Avicennia marina HOM05D007913 ORTHO05D009599 1.1e-09 67.0 109 43.1
Manes.05G137750 Manihot esculenta HOM05D021252 ORTHO05D012395 1.1e-09 67.0 113 39.8
RcHm_v2.0_Chr4g0435331 Rosa chinensis HOM05D007913 ORTHO05D009599 2.4e-09 65.9 109 42.2
Thecc.02G356100 Theobroma cacao HOM05D013794 ORTHO05D009599 3.1e-09 65.5 119 43.7
CANSAT01G0283 Cannabis sativa HOM05D007913 ORTHO05D009599 4.0e-09 65.1 114 43.0
QL01p043322 Quercus lobata HOM05D013794 ORTHO05D009599 4.0e-09 65.1 113 41.6
Manes.01G012300 Manihot esculenta HOM05D021252 ORTHO05D012395 6.9e-09 64.3 119 41.2
Rhsim12G0143600 Rhododendron simsii HOM05D007913 ORTHO05D009599 9.0e-09 63.9 86 48.8
Haze_06126 Corylus avellana HOM05D007913 ORTHO05D009599 1.5e-08 63.2 113 44.2
RcHm_v2.0_Chr4g0435341 Rosa chinensis HOM05D007913 ORTHO05D009599 2.0e-08 62.8 112 40.2
MSTRG.13522 Avicennia marina HOM05D007913 ORTHO05D009599 2.6e-08 62.4 109 38.5
Peaxi162Scf00382g00026 Petunia axillaris HOM05D007913 ORTHO05D009599 2.6e-08 62.4 113 38.9
Ciclev10033117m.g Citrus clementina HOM05D013794 ORTHO05D009599 3.4e-08 62.0 109 43.1
CsaV3_5G034250 Cucumis sativus L. HOM05D022913 ORTHO05D025094 5.8e-08 61.2 106 39.6
Dinv21097 Davidia involucrata HOM05D007913 ORTHO05D009599 5.8e-08 61.2 73 50.7
Thecc.03G034200 Theobroma cacao HOM05D021252 ORTHO05D012395 5.8e-08 61.2 114 40.4
MSTRG.2240 Avicennia marina HOM05D007913 ORTHO05D009599 7.6e-08 60.8 114 40.4
MD13G1042800 Malus domestica HOM05D007913 ORTHO05D009599 7.6e-08 60.8 115 40.0
Peaxi162Scf00382g00033 Petunia axillaris HOM05D007913 ORTHO05D009599 7.6e-08 60.8 109 42.2
Atru.chr11.1275 Acer truncatum HOM05D007913 ORTHO05D009599 1.3e-07 60.1 111 42.3
MSTRG.832 Avicennia marina HOM05D007913 ORTHO05D009599 1.3e-07 60.1 115 40.9
Oeu006381.1 Olea europaea HOM05D010627 ORTHO05D013125 1.3e-07 60.1 90 44.4
vmacro23289 Vaccinium macrocarpon HOM05D007913 ORTHO05D009599 1.3e-07 60.1 119 40.3
Dinv09801 Davidia involucrata HOM05D007913 ORTHO05D009599 2.9e-07 58.9 75 48.0
SGA_v2.0_scaffold14G06855 Striga asiatica HOM05D007913 ORTHO05D009599 3.8e-07 58.5 71 52.1
MSTRG.13525 Avicennia marina HOM05D007913 ORTHO05D009599 6.4e-07 57.8 72 50.0
Gorai.008G183600 Gossypium raimondii HOM05D013794 ORTHO05D009599 6.4e-07 57.8 108 43.5
SalBow8G2445 Salvia bowleyana HOM05D007913 ORTHO05D009599 6.4e-07 57.8 96 41.7
CiPaw.16G064400 Carya illinoinensis HOM05D007913 ORTHO05D009599 8.4e-07 57.4 127 37.0
FAN22G1199 Fragaria x ananassa HOM05D007913 ORTHO05D009599 8.4e-07 57.4 106 39.6
FvH4_4g27520 Fragaria vesca HOM05D007913 ORTHO05D009599 1.1e-06 57.0 110 36.4
FAN12G2484 Fragaria x ananassa HOM05D007913 ORTHO05D009599 1.1e-06 57.0 110 36.4
FAN12G3451 Fragaria x ananassa HOM05D007913 ORTHO05D009599 1.1e-06 57.0 110 36.4
Nitab4.5_0006400g0040 Nicotiana tabacum HOM05D007913 ORTHO05D009599 1.1e-06 57.0 90 42.2
MSTRG.13523 Avicennia marina HOM05D007913 ORTHO05D009599 1.4e-06 56.6 112 37.5
MELO3C012240.2 Cucumis melo HOM05D022913 ORTHO05D025094 1.4e-06 56.6 103 36.9
DCAR_030149 Daucus carota HOM05D007913 ORTHO05D009599 1.9e-06 56.2 110 41.8
FAN07G1066 Fragaria x ananassa HOM05D007913 ORTHO05D009599 1.9e-06 56.2 106 38.7
MSTRG.13526 Avicennia marina HOM05D007913 ORTHO05D009599 2.4e-06 55.8 109 40.4
Gohir.D12G171000 Gossypium hirsutum HOM05D013794 ORTHO05D009599 2.4e-06 55.8 108 42.6


User provided reference genes

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