Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR370G0002 Trochodendron aralioides HOM05D006680 ORTHO05D008206 4.2e-57 224.6 120 100.0
Nn4g25792 Nelumbo nucifera HOM05D006680 ORTHO05D008206 8.5e-42 173.7 119 78.2
Nn3g21479 Nelumbo nucifera HOM05D006680 ORTHO05D008206 4.2e-41 171.4 106 84.0
MBI19_g25353_MAGBIO Magnolia biondii HOM05D006680 ORTHO05D008206 2.7e-40 168.7 118 72.9
ClCG00G005610 Citrullus lanatus HOM05D006680 ORTHO05D008206 3.0e-39 165.2 119 74.8
CiPaw.01G147500 Carya illinoinensis HOM05D006680 ORTHO05D008206 3.9e-39 164.9 119 75.6
Thecc.04G286300 Theobroma cacao HOM05D006680 ORTHO05D008206 5.1e-39 164.5 113 76.1
Dinv29759 Davidia involucrata HOM05D006680 ORTHO05D008206 6.7e-39 164.1 116 76.7
QL06p009590 Quercus lobata HOM05D006680 ORTHO05D008206 2.0e-38 162.5 119 73.9
Cc03_g01760 Coffea canephora HOM05D006680 ORTHO05D008206 2.6e-38 162.2 119 72.3
Gohir.A10G164900 Gossypium hirsutum HOM05D006680 ORTHO05D008206 2.6e-38 162.2 112 75.0
Gohir.D10G171100 Gossypium hirsutum HOM05D006680 ORTHO05D008206 2.6e-38 162.2 112 75.0
Gorai.011G191100 Gossypium raimondii HOM05D006680 ORTHO05D008206 2.6e-38 162.2 112 75.0
Cpa.g.sc16.184 Carica papaya HOM05D006680 ORTHO05D008206 5.7e-38 161.0 114 76.3
VMungo1215G2846 Vigna mungo HOM05D006680 ORTHO05D008206 5.7e-38 161.0 112 75.9
Atru.chr4.2870 Acer truncatum HOM05D006680 ORTHO05D008206 1.3e-37 159.8 121 73.6
Manes.15G011600 Manihot esculenta HOM05D006680 ORTHO05D008206 1.3e-37 159.8 112 75.0
Migut.G00148 Erythranthe guttata HOM05D006680 ORTHO05D008206 1.7e-37 159.5 119 72.3
Lsat_1_v5_gn_6_95660 Lactuca sativa HOM05D006680 ORTHO05D008206 1.7e-37 159.5 115 69.6
CAN.G129.31 Capsicum annuum HOM05D006680 ORTHO05D008206 2.2e-37 159.1 116 74.1
Gohir.D09G239200 Gossypium hirsutum HOM05D006680 ORTHO05D008206 2.8e-37 158.7 119 73.9
Gorai.006G261900 Gossypium raimondii HOM05D006680 ORTHO05D008206 2.8e-37 158.7 119 73.9
CiPaw.02G082300 Carya illinoinensis HOM05D006680 ORTHO05D008206 3.7e-37 158.3 119 72.3
Potri.008G221000 Populus trichocarpa HOM05D006680 ORTHO05D008206 3.7e-37 158.3 111 74.8
BraA05t22848Z Brassica rapa HOM05D006680 ORTHO05D008206 4.8e-37 157.9 113 73.5
Manes.03G196700 Manihot esculenta HOM05D006680 ORTHO05D008206 4.8e-37 157.9 114 73.7
Potri.010G013100 Populus trichocarpa HOM05D006680 ORTHO05D008206 4.8e-37 157.9 113 74.3
Sabra10G0008200 Salix brachista HOM05D006680 ORTHO05D008206 4.8e-37 157.9 112 75.9
Lalb_Chr13g0303561 Lupinus albus HOM05D006680 ORTHO05D008206 1.1e-36 156.8 116 72.4
TWI09G0327 Tripterygium wilfordii HOM05D006680 ORTHO05D008206 1.1e-36 156.8 112 74.1
A03p34950 Brassica napus HOM05D006680 ORTHO05D008206 1.4e-36 156.4 113 72.6
C03p42530 Brassica napus HOM05D006680 ORTHO05D008206 1.4e-36 156.4 113 72.6
BolC3t16523H Brassica oleracea HOM05D006680 ORTHO05D008206 1.4e-36 156.4 113 72.6
BraA03t12675Z Brassica rapa HOM05D006680 ORTHO05D008206 1.4e-36 156.4 113 72.6
CSS0014864 Camellia sinensis var. sinensis HOM05D006680 ORTHO05D008206 1.4e-36 156.4 119 72.3
Duzib151G0306 Durio zibethinus HOM05D006680 ORTHO05D008206 1.4e-36 156.4 115 74.8
CSS0010580 Camellia sinensis var. sinensis HOM05D006680 ORTHO05D008206 1.8e-36 156.0 119 72.3
Duzib212G0294 Durio zibethinus HOM05D006680 ORTHO05D008206 1.8e-36 156.0 115 73.0
Ciclev10006049m.g Citrus clementina HOM05D006680 ORTHO05D008206 2.4e-36 155.6 112 74.1
Gohir.A09G238300 Gossypium hirsutum HOM05D006680 ORTHO05D008206 2.4e-36 155.6 119 73.1
Peaxi162Scf00646g00027 Petunia axillaris HOM05D006680 ORTHO05D008206 2.4e-36 155.6 119 73.1
Ca_21488_v3 Cicer arietinum L. HOM05D006680 ORTHO05D008206 3.1e-36 155.2 113 73.5
Nitab4.5_0002761g0070 Nicotiana tabacum HOM05D006680 ORTHO05D008206 4.1e-36 154.8 120 72.5
RcHm_v2.0_Chr4g0422811 Rosa chinensis HOM05D006680 ORTHO05D008206 4.1e-36 154.8 113 69.9
Aqoxy2G02951 Aquilegia oxysepala HOM05D006680 ORTHO05D008206 5.3e-36 154.5 118 72.0
Hma1.2p1_1185F.1_g265000 Hydrangea macrophylla HOM05D006680 ORTHO05D008206 7.0e-36 154.1 118 68.6
Nitab4.5_0003466g0010 Nicotiana tabacum HOM05D006680 ORTHO05D008206 7.0e-36 154.1 115 71.3
THA.LOC104818922 Tarenaya hassleriana HOM05D006680 ORTHO05D008206 7.0e-36 154.1 114 71.9
FvH4_4g18340 Fragaria vesca HOM05D006680 ORTHO05D008206 9.1e-36 153.7 113 69.0
Prupe.1G134500 Prunus persica HOM05D006680 ORTHO05D008206 9.1e-36 153.7 109 73.4
FAN07G2082 Fragaria x ananassa HOM05D006680 ORTHO05D008206 1.2e-35 153.3 113 69.0
FAN12G3601 Fragaria x ananassa HOM05D006680 ORTHO05D008206 1.2e-35 153.3 113 69.0
FAN17G1034 Fragaria x ananassa HOM05D006680 ORTHO05D008206 1.2e-35 153.3 113 69.0
Lalb_Chr07g0177791 Lupinus albus HOM05D006680 ORTHO05D008206 1.5e-35 152.9 116 69.8
MD13G1167200 Malus domestica HOM05D006680 ORTHO05D008206 1.5e-35 152.9 121 69.4
Oeu063359.1 Olea europaea HOM05D006680 ORTHO05D008206 1.5e-35 152.9 119 70.6
Peaxi162Scf00246g00103 Petunia axillaris HOM05D006680 ORTHO05D008206 1.5e-35 152.9 113 70.8
BcaC05g29822 Brassica carinata HOM05D006680 ORTHO05D008206 2.0e-35 152.5 114 71.9
BolC5t34701H Brassica oleracea HOM05D006680 ORTHO05D008206 2.0e-35 152.5 114 71.9
FAN12G3976 Fragaria x ananassa HOM05D006680 ORTHO05D008206 2.0e-35 152.5 114 69.3
A05p41250 Brassica napus HOM05D006680 ORTHO05D008206 2.6e-35 152.1 109 74.3
Glyma.07G246700 Glycine max HOM05D006680 ORTHO05D008206 2.6e-35 152.1 115 69.6
Sopen01g028370 Solanum pennellii HOM05D006680 ORTHO05D008206 2.6e-35 152.1 119 69.7
Oeu001107.1 Olea europaea HOM05D006680 ORTHO05D008206 3.5e-35 151.8 119 68.9
PGSC0003DMG400004705 Solanum tuberosum HOM05D006680 ORTHO05D008206 4.5e-35 151.4 114 70.2
PGSC0003DMG400011317 Solanum tuberosum HOM05D006680 ORTHO05D008206 1.0e-34 150.2 119 68.1
DCAR_027070 Daucus carota HOM05D006680 ORTHO05D008206 1.3e-34 149.8 116 66.4
Sed0015603 Sechium edule HOM05D006680 ORTHO05D008206 2.2e-34 149.1 119 67.2
Solyc12g099500.2 Solanum lycopersicum HOM05D006680 ORTHO05D008206 3.8e-34 148.3 114 67.5
Sopen12g034170 Solanum pennellii HOM05D006680 ORTHO05D008206 3.8e-34 148.3 114 67.5
MBI18_g06870_MAGBIO Magnolia biondii HOM05D006680 ORTHO05D008206 6.5e-34 147.5 118 65.3
Sc19g0005290 Simmondsia chinensis HOM05D006680 ORTHO05D008206 6.5e-34 147.5 117 69.2
Sc19g0005370 Simmondsia chinensis HOM05D006680 ORTHO05D008206 6.5e-34 147.5 117 69.2
PSO210G6323 Papaver somniferum HOM05D006680 ORTHO05D008206 2.5e-33 145.6 119 66.4
Medtr4g120020 Medicago truncatula HOM05D006680 ORTHO05D008206 3.2e-33 145.2 112 67.9
SGA_v2.0_scaffold67G22622 Striga asiatica HOM05D006680 ORTHO05D008206 9.4e-33 143.7 119 66.4
Lj4g0016566 Lotus japonicus HOM05D006680 ORTHO05D008206 1.2e-32 143.3 93 78.5
ECA240G4018 Erigeron canadensis HOM05D006680 ORTHO05D008206 1.6e-32 142.9 108 66.7
PSO832G1781 Papaver somniferum HOM05D006680 ORTHO05D008206 1.6e-32 142.9 119 64.7
MSTRG.3906 Avicennia marina HOM05D006680 ORTHO05D008206 2.1e-32 142.5 116 64.7
Carub.0003s0642 Capsella rubella HOM05D006680 ORTHO05D008206 8.0e-32 140.6 92 77.2
HanXRQChr13g0419971 Helianthus annuus HOM05D006680 ORTHO05D008206 1.0e-31 140.2 113 62.8
CARHR081510 Cardamine hirsuta HOM05D006680 ORTHO05D008206 3.9e-31 138.3 93 77.4
Thhalv10021931m.g Eutrema salsugineum HOM05D006680 ORTHO05D008206 3.9e-31 138.3 99 73.7
Ah.08g214570 Amaranthus hybridus HOM05D006680 ORTHO05D008206 6.7e-31 137.5 117 67.5
AT3G06890 Arabidopsis thaliana HOM05D006680 ORTHO05D008206 6.7e-31 137.5 95 74.7
CAN.G484.39 Capsicum annuum HOM05D006680 ORTHO05D008206 8.8e-31 137.1 111 64.9
AL3G18020 Arabidopsis lyrata HOM05D006680 ORTHO05D008206 1.5e-30 136.3 94 75.5
AUR62040379 Chenopodium quinoa HOM05D006680 ORTHO05D008206 2.6e-30 135.6 117 65.0
Psat4g026840 Pisum sativum HOM05D006680 ORTHO05D008206 3.3e-30 135.2 94 73.4
TPR.G3164 Trifolium pratense HOM05D006680 ORTHO05D008206 4.4e-30 134.8 93 74.2
Sp3g05850 Schrenkiella parvula HOM05D006680 ORTHO05D008206 5.7e-30 134.4 92 72.8
CANSAT78G1139 Cannabis sativa HOM05D006680 ORTHO05D008206 7.4e-30 134.0 95 71.6
DCAR_002469 Daucus carota HOM05D006680 ORTHO05D008206 7.4e-30 134.0 117 59.8
Sabra10G0008300 Salix brachista HOM05D006680 ORTHO05D008206 1.1e-28 130.2 109 67.0
PSO170G5007 Papaver somniferum HOM05D006680 ORTHO05D008206 1.2e-27 126.7 100 70.0
Phvul.003G097003 Phaseolus vulgaris HOM05D006680 ORTHO05D008206 1.2e-27 126.7 93 72.0
PSO017G4993 Papaver somniferum HOM05D006680 ORTHO05D008206 2.6e-27 125.6 100 69.0
PGR031G3343 Punica granatum HOM05D006680 ORTHO05D008206 3.5e-27 125.2 119 56.3
DCAR_030521 Daucus carota HOM05D006680 ORTHO05D008206 5.9e-27 124.4 117 56.4
PGR004G0310 Punica granatum HOM05D006680 ORTHO05D008206 1.7e-26 122.9 118 58.5
Os03g0343800 Oryza sativa ssp. japonica HOM05D006680 ORTHO05D008206 2.2e-26 122.5 111 59.5
TAR633G0386 Trochodendron aralioides HOM05D006680 ORTHO05D008206 3.2e-25 118.6 123 57.7
Thecc.09G272700 Theobroma cacao HOM05D006680 ORTHO05D008206 4.7e-24 114.8 82 73.2
Zm00001eb016470 Zea mays HOM05D006680 ORTHO05D008206 1.8e-23 112.8 113 54.9
Zm00001eb124100 Zea mays HOM05D006680 ORTHO05D008206 2.3e-23 112.5 112 54.5
HanXRQChr03g0089341 Helianthus annuus HOM05D006680 ORTHO05D008206 3.0e-23 112.1 116 54.3
MD16G1168200 Malus domestica HOM05D006680 ORTHO05D008206 3.0e-23 112.1 114 59.6
HPP92_000110 Vanilla planifolia HOM05D006680 ORTHO05D008206 5.2e-23 111.3 110 53.6
Rhsim04G0223700 Rhododendron simsii HOM05D006680 ORTHO05D008206 5.7e-22 107.8 90 62.2
Rhsim09G0007300 Rhododendron simsii HOM05D006680 ORTHO05D008206 5.7e-22 107.8 90 62.2
Thecc.05G268700 Theobroma cacao HOM05D006680 ORTHO05D008206 3.7e-21 105.1 94 61.7
Zm00001eb394930 Zea mays HOM05D006680 ORTHO05D008206 6.3e-21 104.4 93 61.3
ATR0796G044 Amborella trichopoda HOM05D006680 ORTHO05D008206 4.1e-20 101.7 111 50.5
unitig_32.g11869 Utricularia gibba HOM05D006680 ORTHO05D008206 2.7e-19 99.0 116 50.0
Eucgr.H03932 Eucalyptus grandis HOM05D006680 ORTHO05D008206 1.2e-16 90.1 119 48.7
Os07g0673801 Oryza sativa ssp. japonica HOM05D006680 ORTHO05D008206 5.2e-15 84.7 108 47.2
MELO3C006671.2 Cucumis melo HOM05D006680 ORTHO05D008206 5.0e-10 68.2 52 73.1
SalBow5G0837 Salvia bowleyana HOM05D006680 ORTHO05D008206 1.1e-09 67.0 80 47.5


User provided reference genes

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