Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G1146 Trochodendron aralioides HOM05D006963 ORTHO05D008783 0.0e+00 2191.4 1188 100.0
QL01p015018 Quercus lobata HOM05D006963 ORTHO05D008783 0.0e+00 1294.6 1187 60.9
Cfa010289 Carpinus fangiana HOM05D006963 ORTHO05D008783 0.0e+00 1293.1 1264 59.0
Haze_23703 Corylus avellana HOM05D006963 ORTHO05D008783 0.0e+00 1281.9 1183 60.9
Atru.chr3.3517 Acer truncatum HOM05D006963 ORTHO05D008783 0.0e+00 1255.0 1181 60.0
Atru.chr3.3511 Acer truncatum HOM05D006963 ORTHO05D008783 0.0e+00 1251.5 1181 59.9
Aqoxy1G01103 Aquilegia oxysepala HOM05D006963 ORTHO05D008783 0.0e+00 1244.6 1267 58.1
CiPaw.13G122900 Carya illinoinensis HOM05D006963 ORTHO05D008783 0.0e+00 1243.8 1255 57.4
Thecc.09G298600 Theobroma cacao HOM05D006963 ORTHO05D008783 0.0e+00 1241.5 1263 55.5
Prupe.6G112700 Prunus persica HOM05D006963 ORTHO05D008783 0.0e+00 1238.0 1206 59.0
Manes.04G012900 Manihot esculenta HOM05D006963 ORTHO05D008783 0.0e+00 1236.5 1267 56.0
Ciclev10027698m.g Citrus clementina HOM05D006963 ORTHO05D008783 0.0e+00 1232.2 1183 59.3
Gohir.A13G223800 Gossypium hirsutum HOM05D006963 ORTHO05D008783 0.0e+00 1205.3 1197 56.4
RcHm_v2.0_Chr5g0056861 Rosa chinensis HOM05D006963 ORTHO05D008783 0.0e+00 1202.2 1179 58.2
Gorai.013G259300 Gossypium raimondii HOM05D006963 ORTHO05D008783 0.0e+00 1201.8 1197 56.3
MD03G1129000 Malus domestica HOM05D006963 ORTHO05D008783 0.0e+00 1198.0 1264 55.8
MBI13_g24960_MAGBIO Magnolia biondii HOM05D006963 ORTHO05D008783 0.0e+00 1192.6 1298 56.2
Potri.009G005300 Populus trichocarpa HOM05D006963 ORTHO05D008783 0.0e+00 1183.3 1191 57.6
Duzib168G1517 Durio zibethinus HOM05D006963 ORTHO05D008783 0.0e+00 1179.5 1263 53.4
FAN21G1782 Fragaria x ananassa HOM05D006963 ORTHO05D008783 0.0e+00 1177.5 1187 57.4
FvH4_3g30640 Fragaria vesca HOM05D006963 ORTHO05D008783 0.0e+00 1174.1 1192 57.0
Gohir.D13G228600 Gossypium hirsutum HOM05D006963 ORTHO05D008783 0.0e+00 1173.3 1197 55.6
Rhsim01G0210700 Rhododendron simsii HOM05D006963 ORTHO05D008783 0.0e+00 1166.4 1184 58.2
Glyma.13G322000 Glycine max HOM05D006963 ORTHO05D008783 0.0e+00 1162.5 1187 56.0
CSS0000606 Camellia sinensis var. sinensis HOM05D006963 ORTHO05D008783 0.0e+00 1160.6 1094 62.1
vmacro14391 Vaccinium macrocarpon HOM05D006963 ORTHO05D008783 0.0e+00 1154.4 1269 54.4
FAN16G1993 Fragaria x ananassa HOM05D006963 ORTHO05D008783 0.0e+00 1149.8 1181 56.6
Phvul.005G130400 Phaseolus vulgaris HOM05D006963 ORTHO05D008783 0.0e+00 1149.0 1188 55.7
FAN11G1352 Fragaria x ananassa HOM05D006963 ORTHO05D008783 0.0e+00 1147.9 1244 54.5
FAN25G3586 Fragaria x ananassa HOM05D006963 ORTHO05D008783 0.0e+00 1147.5 1257 54.0
CANSAT64G0534 Cannabis sativa HOM05D006963 ORTHO05D008783 0.0e+00 1139.0 1275 54.0
arahy.Tifrunner.gnm1.ann1.10EEU4 Arachis hypogaea HOM05D006963 ORTHO05D008783 0.0e+00 1137.1 1181 55.0
Lalb_Chr24g0394941 Lupinus albus HOM05D006963 ORTHO05D008783 0.0e+00 1135.6 1176 55.4
Lj3g0023334 Lotus japonicus HOM05D006963 ORTHO05D008783 0.0e+00 1132.1 1187 55.7
PSO339G1013 Papaver somniferum HOM05D006963 ORTHO05D008783 0.0e+00 1130.2 1262 54.8
PSO063G0444 Papaver somniferum HOM05D006963 ORTHO05D008783 0.0e+00 1129.0 1268 54.9
Ca_01706_v3 Cicer arietinum L. HOM05D006963 ORTHO05D008783 0.0e+00 1128.2 1173 55.3
arahy.Tifrunner.gnm1.ann1.5C5N68 Arachis hypogaea HOM05D006963 ORTHO05D008783 0.0e+00 1126.3 1181 54.8
Medtr2g084285 Medicago truncatula HOM05D006963 ORTHO05D008783 0.0e+00 1125.2 1179 54.6
Sabra09G0002400 Salix brachista HOM05D006963 ORTHO05D008783 0.0e+00 1123.6 1191 55.2
Psat5g253040 Pisum sativum HOM05D006963 ORTHO05D008783 0.0e+00 1123.2 1179 54.7
MELO3C026954.2 Cucumis melo HOM05D006963 ORTHO05D008783 0.0e+00 1119.4 1267 54.0
CsaV3_6G014380 Cucumis sativus L. HOM05D006963 ORTHO05D008783 0.0e+00 1114.4 1263 52.8
Sed0000311 Sechium edule HOM05D006963 ORTHO05D008783 0.0e+00 1114.4 1190 54.5
VMungo1080G0719 Vigna mungo HOM05D006963 ORTHO05D008783 0.0e+00 1113.6 1186 54.2
COL.COLO4_19194 Corchorus olitorius HOM05D006963 ORTHO05D008783 0.0e+00 1111.7 1184 54.3
TWI79G0599 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 0.0e+00 1099.0 1186 53.8
Sabra04G0147300 Salix brachista HOM05D006963 ORTHO05D008783 0.0e+00 1095.5 1191 54.7
Solyc06g074810.3 Solanum lycopersicum HOM05D006963 ORTHO05D008783 0.0e+00 1083.2 1266 51.7
Sopen06g031250 Solanum pennellii HOM05D006963 ORTHO05D008783 0.0e+00 1077.4 1266 51.5
ClCG02G021610 Citrullus lanatus HOM05D006963 ORTHO05D008783 8.1e-312 1074.7 1325 50.9
Cc01_g10290 Coffea canephora HOM05D006963 ORTHO05D008783 1.6e-310 1069.7 1202 52.4
Cpa.g.sc1.5 Carica papaya HOM05D006963 ORTHO05D008783 4.0e-309 1065.1 1225 53.5
PGSC0003DMG400007133 Solanum tuberosum HOM05D006963 ORTHO05D008783 2.6e-308 1062.4 1275 51.6
TPR.G21046 Trifolium pratense HOM05D006963 ORTHO05D008783 1.1e-306 1057.0 1203 52.0
DCAR_018766 Daucus carota HOM05D006963 ORTHO05D008783 1.7e-304 1049.7 1187 53.1
Nitab4.5_0003155g0020 Nicotiana tabacum HOM05D006963 ORTHO05D008783 6.4e-299 1031.2 1247 49.6
Eucgr.J00389 Eucalyptus grandis HOM05D006963 ORTHO05D008783 2.3e-293 1012.7 1178 50.4
PGR119G1224 Punica granatum HOM05D006963 ORTHO05D008783 7.5e-292 1007.7 1183 50.7
Lj2A1007T38 Lonicera japonica HOM05D006963 ORTHO05D008783 1.1e-287 993.8 1028 58.0
MSTRG.18703 Avicennia marina HOM05D006963 ORTHO05D008783 3.1e-285 985.7 1193 50.2
Sc06g0010790 Simmondsia chinensis HOM05D006963 ORTHO05D008783 1.0e-280 970.7 1198 50.1
GSVIVG01031463001 Vitis vinifera HOM05D006963 ORTHO05D008783 4.3e-279 965.3 1113 52.3
Aa31LG5G7960 Aethionema arabicum HOM05D006963 ORTHO05D008783 3.8e-275 952.2 1197 49.7
EL10Ac9g22623 Beta vulgaris HOM05D006963 ORTHO05D008783 5.6e-271 938.3 1205 49.6
Hund08356 Selenicereus undatus HOM05D006963 ORTHO05D008783 4.9e-267 925.2 1200 47.1
Nitab4.5_0001163g0050 Nicotiana tabacum HOM05D006963 ORTHO05D008783 6.4e-267 924.9 1253 45.5
ECA248G2820 Erigeron canadensis HOM05D006963 ORTHO05D008783 1.9e-266 923.3 1175 49.0
HanXRQChr11g0346501 Helianthus annuus HOM05D006963 ORTHO05D008783 6.7e-264 914.8 1186 48.8
Peaxi162Scf00114g00812 Petunia axillaris HOM05D006963 ORTHO05D008783 2.6e-260 902.9 1200 46.2
Lsat_1_v5_gn_1_64681 Lactuca sativa HOM05D006963 ORTHO05D008783 1.1e-258 897.5 1191 47.8
AL4G21950 Arabidopsis lyrata HOM05D006963 ORTHO05D008783 6.0e-257 891.7 1189 47.4
Migut.D02292 Erythranthe guttata HOM05D006963 ORTHO05D008783 1.8e-256 890.2 1185 47.4
Ah.01g003350 Amaranthus hybridus HOM05D006963 ORTHO05D008783 1.1e-253 880.9 1203 47.6
SGA_v2.0_scaffold27G11571 Striga asiatica HOM05D006963 ORTHO05D008783 1.1e-250 870.9 1206 44.5
CAN.G1432.10 Capsicum annuum HOM05D006963 ORTHO05D008783 1.2e-249 867.5 1129 46.3
ATR0329G003 Amborella trichopoda HOM05D006963 ORTHO05D008783 5.7e-247 858.6 1324 44.5
AUR62014974 Chenopodium quinoa HOM05D006963 ORTHO05D008783 3.2e-242 842.8 1085 49.2
Dinv16225 Davidia involucrata HOM05D006963 ORTHO05D008783 5.5e-242 842.0 778 63.4
AUR62029159 Chenopodium quinoa HOM05D006963 ORTHO05D008783 2.2e-235 820.1 1040 50.1
CARHR121070 Cardamine hirsuta HOM05D006963 ORTHO05D008783 1.1e-229 801.2 1080 47.9
Os02g0823800 Oryza sativa ssp. japonica HOM05D006963 ORTHO05D008783 7.7e-228 795.0 1184 43.8
Zm00001eb190880 Zea mays HOM05D006963 ORTHO05D008783 5.3e-221 772.3 1181 43.0
Glyma.12G178700 Glycine max HOM05D006963 ORTHO05D008783 1.2e-212 744.6 748 57.5
Oeu008360.1 Olea europaea HOM05D006963 ORTHO05D008783 2.9e-195 686.8 1061 41.8
HPP92_025769 Vanilla planifolia HOM05D006963 ORTHO05D008783 8.9e-192 675.2 989 44.2
TWI79G0699 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 1.0e-187 661.8 763 52.9
SEGI_09379 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 3.9e-187 659.8 1252 38.9
Mapoly0011s0199 Marchantia polymorpha HOM05D006963 ORTHO05D008783 8.7e-139 499.2 1230 33.2
CDE04G1589 Ceratophyllum demersum HOM05D006963 ORTHO05D008783 1.8e-136 491.5 604 50.2
unitig_899.g15359 Utricularia gibba HOM05D006963 ORTHO05D008783 4.6e-132 476.9 1176 33.5
Cc00_g22940 Coffea canephora HOM05D006963 ORTHO05D008783 3.0e-131 474.2 624 45.8
Dinv16223 Davidia involucrata HOM05D006963 ORTHO05D008783 1.1e-130 472.2 391 62.7
Pp3c19_6480 Physcomitrium patens HOM05D006963 ORTHO05D008783 3.9e-115 420.6 1264 30.9
AagrBONN_evm.TU.Sc2ySwM_344.4789 Anthoceros agrestis HOM05D006963 ORTHO05D008783 7.7e-111 406.4 1133 33.9
Glyma.12G178600 Glycine max HOM05D006963 ORTHO05D008783 2.5e-109 401.4 394 55.8
Actinidia20425 Actinidia chinensis HOM05D006963 ORTHO05D008783 4.7e-92 344.0 444 49.5
TAR623G1253 Trochodendron aralioides HOM05D006963 ORTHO05D008783 2.0e-87 328.6 214 77.6
SEGI_31087 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 1.3e-78 299.3 525 38.1
CDE04G0208 Ceratophyllum demersum HOM05D006963 ORTHO05D008783 1.1e-64 253.1 391 40.2
CBR_g8254 Chara braunii HOM05D006963 ORTHO05D008783 1.4e-43 183.0 1284 25.2
Nn2g13854 Nelumbo nucifera HOM05D006963 ORTHO05D008783 6.9e-43 180.6 197 53.8
Dinv29380 Davidia involucrata HOM05D006963 ORTHO05D008783 2.5e-37 162.2 193 63.2
arahy.Tifrunner.gnm1.ann1.YZCM4H Arachis hypogaea HOM05D006963 ORTHO05D008783 4.8e-36 157.9 288 35.8
TAR623G0981 Trochodendron aralioides HOM05D006963 ORTHO05D008783 4.8e-36 157.9 87 85.1
CSS0014134 Camellia sinensis var. sinensis HOM05D006963 ORTHO05D008783 4.2e-32 144.8 118 63.6
arahy.Tifrunner.gnm1.ann1.WJC7CQ Arachis hypogaea HOM05D006963 ORTHO05D008783 5.5e-32 144.4 261 37.2
TAR623G0866 Trochodendron aralioides HOM05D006963 ORTHO05D008783 5.5e-32 144.4 83 84.3
SEGI_19036 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 1.3e-28 133.3 116 56.0
Oeu008361.1 Olea europaea HOM05D006963 ORTHO05D008783 9.0e-27 127.1 112 55.4
CAN.G1432.11 Capsicum annuum HOM05D006963 ORTHO05D008783 1.0e-25 123.6 78 71.8
MD11G1148100 Malus domestica HOM05D006963 ORTHO05D008783 1.4e-24 119.8 110 59.1
TAR629G2211 Trochodendron aralioides HOM05D002089 ORTHO05D022294 2.1e-23 115.9 82 72.0
Psat0s1214g0160 Pisum sativum HOM05D006963 ORTHO05D008783 1.3e-22 113.2 91 58.2
Pp3c7_26050 Physcomitrium patens HOM05D006963 ORTHO05D008783 3.6e-07 62.0 74 41.9


User provided reference genes

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