Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G1081 Trochodendron aralioides HOM05D005215 ORTHO05D006382 1.9e-124 449.1 213 100.0
TAR623G0377 Trochodendron aralioides HOM05D005215 ORTHO05D006382 1.4e-111 406.4 213 89.7
MBI01_g04055_MAGBIO Magnolia biondii HOM05D005215 ORTHO05D006382 4.0e-111 404.8 213 89.2
Dinv11822 Davidia involucrata HOM05D005215 ORTHO05D006382 3.8e-109 398.3 213 87.8
CSS0033765 Camellia sinensis var. sinensis HOM05D005215 ORTHO05D006382 4.2e-108 394.8 213 85.4
Atru.chr12.1046 Acer truncatum HOM05D005215 ORTHO05D006382 3.9e-106 388.3 213 84.0
CDE06G1220 Ceratophyllum demersum HOM05D005215 ORTHO05D006382 8.7e-106 387.1 209 83.3
Hma1.2p1_0756F.1_g213190 Hydrangea macrophylla HOM05D005215 ORTHO05D006382 1.5e-105 386.3 213 85.0
GSVIVG01010684001 Vitis vinifera HOM05D005215 ORTHO05D006382 2.5e-105 385.6 204 86.8
CDE08G0922 Ceratophyllum demersum HOM05D005215 ORTHO05D006382 2.1e-104 382.5 209 81.8
TWI15G0816 Tripterygium wilfordii HOM05D005215 ORTHO05D006382 6.2e-104 380.9 213 83.6
PGR044G2198 Punica granatum HOM05D005215 ORTHO05D006382 8.1e-104 380.6 213 83.1
vmacro07260 Vaccinium macrocarpon HOM05D005215 ORTHO05D006382 1.4e-103 379.8 214 82.2
Ciclev10016681m.g Citrus clementina HOM05D005215 ORTHO05D006382 1.8e-103 379.4 213 80.8
Nn6g34863 Nelumbo nucifera HOM05D005215 ORTHO05D006382 2.4e-103 379.0 208 86.5
Cc02_g09580 Coffea canephora HOM05D005215 ORTHO05D006382 3.1e-103 378.6 208 82.7
Thecc.10G114600 Theobroma cacao HOM05D005215 ORTHO05D006382 4.0e-103 378.3 213 82.2
Actinidia34727 Actinidia chinensis HOM05D005215 ORTHO05D006382 1.2e-102 376.7 213 83.6
CSS0044679 Camellia sinensis var. sinensis HOM05D005215 ORTHO05D006382 2.6e-102 375.6 213 83.1
Nitab4.5_0009484g0020 Nicotiana tabacum HOM05D005215 ORTHO05D006382 3.4e-102 375.2 209 81.3
CiPaw.14G033600 Carya illinoinensis HOM05D005215 ORTHO05D006382 4.4e-102 374.8 213 82.6
AUR62042083 Chenopodium quinoa HOM05D005215 ORTHO05D006382 7.6e-102 374.0 213 81.2
ClCG08G008310 Citrullus lanatus HOM05D005215 ORTHO05D006382 7.6e-102 374.0 208 82.7
ATR0776G030 Amborella trichopoda HOM05D005215 ORTHO05D006382 9.9e-102 373.6 208 82.2
CAN.G1417.3 Capsicum annuum HOM05D005215 ORTHO05D006382 2.2e-101 372.5 209 81.8
Duzib114G0243 Durio zibethinus HOM05D005215 ORTHO05D006382 2.2e-101 372.5 213 81.7
CiPaw.13G040900 Carya illinoinensis HOM05D005215 ORTHO05D006382 2.9e-101 372.1 213 81.2
Nitab4.5_0002586g0020 Nicotiana tabacum HOM05D005215 ORTHO05D006382 2.9e-101 372.1 209 80.9
Solyc11g006770.3 Solanum lycopersicum HOM05D005215 ORTHO05D006382 4.9e-101 371.3 209 80.4
PGSC0003DMG400023967 Solanum tuberosum HOM05D005215 ORTHO05D006382 4.9e-101 371.3 209 80.4
Actinidia18624 Actinidia chinensis HOM05D005215 ORTHO05D006382 6.4e-101 370.9 198 87.4
EL10Ac4g07754 Beta vulgaris HOM05D005215 ORTHO05D006382 1.1e-100 370.2 211 80.6
SalBow3G3150 Salvia bowleyana HOM05D005215 ORTHO05D006382 1.1e-100 370.2 209 81.3
QL04p046761 Quercus lobata HOM05D005215 ORTHO05D006382 1.4e-100 369.8 212 79.7
Hund06789 Selenicereus undatus HOM05D005215 ORTHO05D006382 3.2e-100 368.6 213 80.8
Sopen11g002700 Solanum pennellii HOM05D005215 ORTHO05D006382 3.2e-100 368.6 208 80.3
Migut.F00868 Erythranthe guttata HOM05D005215 ORTHO05D006382 4.2e-100 368.2 213 79.3
Prupe.2G069900 Prunus persica HOM05D005215 ORTHO05D006382 1.2e-99 366.7 213 78.4
Aqoxy4G02757 Aquilegia oxysepala HOM05D005215 ORTHO05D006382 2.1e-99 365.9 211 79.1
Migut.C00229 Erythranthe guttata HOM05D005215 ORTHO05D006382 2.1e-99 365.9 213 78.9
MSTRG.27562 Avicennia marina HOM05D005215 ORTHO05D006382 3.5e-99 365.2 213 77.9
Sed0008445 Sechium edule HOM05D005215 ORTHO05D006382 3.5e-99 365.2 208 80.3
Gorai.009G303500 Gossypium raimondii HOM05D005215 ORTHO05D006382 4.6e-99 364.8 213 80.3
Manes.18G138580 Manihot esculenta HOM05D005215 ORTHO05D006382 7.9e-99 364.0 213 80.8
PSO339G4522 Papaver somniferum HOM05D005215 ORTHO05D006382 7.9e-99 364.0 213 77.9
arahy.Tifrunner.gnm1.ann1.E5H8ET Arachis hypogaea HOM05D005215 ORTHO05D006382 1.0e-98 363.6 211 79.6
Lsat_1_v5_gn_2_104201 Lactuca sativa HOM05D005215 ORTHO05D006382 1.0e-98 363.6 208 79.8
Gohir.D05G288400 Gossypium hirsutum HOM05D005215 ORTHO05D006382 1.7e-98 362.8 213 79.8
TWI63G0161 Tripterygium wilfordii HOM05D005215 ORTHO05D006382 1.7e-98 362.8 213 79.8
Eucgr.J00268 Eucalyptus grandis HOM05D005215 ORTHO05D006382 2.3e-98 362.5 213 78.9
Lj5g0024589 Lotus japonicus HOM05D005215 ORTHO05D006382 2.3e-98 362.5 211 79.1
Peaxi162Scf00125g00233 Petunia axillaris HOM05D005215 ORTHO05D006382 2.3e-98 362.5 209 78.5
Sc06g0002380 Simmondsia chinensis HOM05D005215 ORTHO05D006382 2.3e-98 362.5 209 79.9
SGA_v2.0_scaffold329G48861 Striga asiatica HOM05D005215 ORTHO05D006382 2.3e-98 362.5 213 77.9
DCAR_006336 Daucus carota HOM05D005215 ORTHO05D006382 5.1e-98 361.3 204 80.9
Migut.B01734 Erythranthe guttata HOM05D005215 ORTHO05D006382 5.1e-98 361.3 213 77.5
Potri.010G240000 Populus trichocarpa HOM05D005215 ORTHO05D006382 5.1e-98 361.3 213 79.3
Gohir.A05G287300 Gossypium hirsutum HOM05D005215 ORTHO05D006382 6.6e-98 360.9 213 79.8
MD02G1262000 Malus domestica HOM05D005215 ORTHO05D006382 8.7e-98 360.5 213 77.5
PSO384G1677 Papaver somniferum HOM05D005215 ORTHO05D006382 4.3e-97 358.2 213 76.5
TPR.G2443 Trifolium pratense HOM05D005215 ORTHO05D006382 4.3e-97 358.2 208 77.9
HanXRQChr07g0194041 Helianthus annuus HOM05D005215 ORTHO05D006382 5.6e-97 357.8 208 77.4
Potri.008G019200 Populus trichocarpa HOM05D005215 ORTHO05D006382 5.6e-97 357.8 213 78.4
Medtr1g111860 Medicago truncatula HOM05D005215 ORTHO05D006382 9.6e-97 357.1 208 78.8
HPP92_020962 Vanilla planifolia HOM05D005215 ORTHO05D006382 9.6e-97 357.1 210 77.6
CANSAT56G3442 Cannabis sativa HOM05D005215 ORTHO05D006382 1.6e-96 356.3 213 77.5
Cpa.g.sc704.2 Carica papaya HOM05D005215 ORTHO05D006382 1.6e-96 356.3 193 84.5
THA.LOC104801304 Tarenaya hassleriana HOM05D005215 ORTHO05D006382 2.1e-96 355.9 210 80.0
Os10g0573100 Oryza sativa ssp. japonica HOM05D005215 ORTHO05D006382 2.8e-96 355.5 207 76.3
Glyma.20G074500 Glycine max HOM05D005215 ORTHO05D006382 4.8e-96 354.8 213 78.9
Sabra08G0012600 Salix brachista HOM05D005215 ORTHO05D006382 8.1e-96 354.0 213 78.4
Sed0014754 Sechium edule HOM05D005215 ORTHO05D006382 8.1e-96 354.0 208 76.4
THA.LOC104811337 Tarenaya hassleriana HOM05D005215 ORTHO05D006382 8.1e-96 354.0 210 78.1
Psat0s1904g0160 Pisum sativum HOM05D005215 ORTHO05D006382 1.4e-95 353.2 208 78.4
VMungo0720G2906 Vigna mungo HOM05D005215 ORTHO05D006382 1.4e-95 353.2 213 76.5
MD07G1058400 Malus domestica HOM05D005215 ORTHO05D006382 1.8e-95 352.8 207 78.3
SEGI_01358 Sequoiadendron giganteum HOM05D005215 ORTHO05D006382 2.4e-95 352.4 208 78.4
Phvul.007G235600 Phaseolus vulgaris HOM05D005215 ORTHO05D006382 4.0e-95 351.7 211 77.3
arahy.Tifrunner.gnm1.ann1.KL5LPC Arachis hypogaea HOM05D005215 ORTHO05D006382 6.9e-95 350.9 234 71.8
ECA232G3141 Erigeron canadensis HOM05D005215 ORTHO05D006382 6.9e-95 350.9 208 76.9
Glyma.10G123100 Glycine max HOM05D005215 ORTHO05D006382 2.0e-94 349.4 213 77.0
HanXRQChr11g0321671 Helianthus annuus HOM05D005215 ORTHO05D006382 2.0e-94 349.4 208 76.9
Aa31LG5G21000 Aethionema arabicum HOM05D005215 ORTHO05D006382 4.5e-94 348.2 211 76.8
CARHR133400 Cardamine hirsuta HOM05D005215 ORTHO05D006382 4.5e-94 348.2 212 77.4
AUR62041518 Chenopodium quinoa HOM05D005215 ORTHO05D006382 4.5e-94 348.2 233 71.7
Lsat_1_v5_gn_0_8140 Lactuca sativa HOM05D005215 ORTHO05D006382 4.5e-94 348.2 208 76.9
BcaC02g07452 Brassica carinata HOM05D005215 ORTHO05D006382 9.9e-94 347.1 210 76.7
RcHm_v2.0_Chr7g0197741 Rosa chinensis HOM05D005215 ORTHO05D006382 9.9e-94 347.1 213 76.1
AL4G36010 Arabidopsis lyrata HOM05D005215 ORTHO05D006382 2.9e-93 345.5 211 77.3
Thhalv10017213m.g Eutrema salsugineum HOM05D005215 ORTHO05D006382 2.9e-93 345.5 210 76.2
Oeu030225.2 Olea europaea HOM05D005215 ORTHO05D006382 2.9e-93 345.5 217 76.5
Sp4g21070 Schrenkiella parvula HOM05D005215 ORTHO05D006382 2.9e-93 345.5 211 76.3
BraA04t18418Z Brassica rapa HOM05D005215 ORTHO05D006382 3.8e-93 345.1 210 76.7
AT2G38710 Arabidopsis thaliana HOM05D005215 ORTHO05D006382 6.4e-93 344.4 205 78.0
Carub.0004s2071 Capsella rubella HOM05D005215 ORTHO05D006382 8.4e-93 344.0 211 75.8
C04p66830 Brassica napus HOM05D005215 ORTHO05D006382 1.1e-92 343.6 210 76.2
BolC4t28184H Brassica oleracea HOM05D005215 ORTHO05D006382 1.4e-92 343.2 210 76.2
FAN13G0513 Fragaria x ananassa HOM05D005215 ORTHO05D006382 2.4e-92 342.4 213 75.1
FvH4_5g02370 Fragaria vesca HOM05D005215 ORTHO05D006382 9.3e-92 340.5 213 74.6
FAN04G2904 Fragaria x ananassa HOM05D005215 ORTHO05D006382 9.3e-92 340.5 201 77.6
SMO331G0011 Selaginella moellendorffii HOM05D005215 ORTHO05D006382 9.3e-92 340.5 202 75.7
Pp3c3_21710 Physcomitrium patens HOM05D005215 ORTHO05D006382 1.2e-91 340.1 202 75.7
C03p25540 Brassica napus HOM05D005215 ORTHO05D006382 2.1e-91 339.3 209 76.1
BolC3t14941H Brassica oleracea HOM05D005215 ORTHO05D006382 2.1e-91 339.3 209 76.1
BraA03t11391Z Brassica rapa HOM05D005215 ORTHO05D006382 2.1e-91 339.3 209 76.1
A03p21550 Brassica napus HOM05D005215 ORTHO05D006382 2.7e-91 339.0 209 76.1
FAN18G1091 Fragaria x ananassa HOM05D005215 ORTHO05D006382 2.7e-91 339.0 213 74.2
Haze_03299 Corylus avellana HOM05D005215 ORTHO05D006382 3.0e-90 335.5 253 67.2
Mapoly0059s0056 Marchantia polymorpha HOM05D005215 ORTHO05D006382 3.3e-89 332.0 204 74.0
Zm00001eb390460 Zea mays HOM05D005215 ORTHO05D006382 1.3e-88 330.1 209 70.8
Dinv10934 Davidia involucrata HOM05D005215 ORTHO05D006382 2.8e-88 328.9 166 91.0
AagrBONN_evm.TU.Sc2ySwM_117.3510 Anthoceros agrestis HOM05D005215 ORTHO05D006382 3.7e-88 328.6 201 73.6
PSO339G6572 Papaver somniferum HOM05D005215 ORTHO05D006382 6.2e-88 327.8 209 73.2
Oeu026607.3 Olea europaea HOM05D005215 ORTHO05D006382 8.1e-88 327.4 295 56.9
PSO801G0072 Papaver somniferum HOM05D005215 ORTHO05D006382 5.3e-87 324.7 209 72.7
Ah.11g047220 Amaranthus hybridus HOM05D005215 ORTHO05D006382 2.6e-86 322.4 212 74.1
Lj3A925G70 Lonicera japonica HOM05D005215 ORTHO05D006382 4.2e-84 315.1 178 82.0
MELO3C019899.2 Cucumis melo HOM05D005215 ORTHO05D006382 2.3e-82 309.3 173 82.7
FAN08G2650 Fragaria x ananassa HOM05D005215 ORTHO05D006382 7.4e-81 304.3 214 68.7
COL.COLO4_05151 Corchorus olitorius HOM05D005215 ORTHO05D006382 6.7e-74 281.2 429 41.7
Nn2g14190 Nelumbo nucifera HOM05D005215 ORTHO05D006382 1.4e-68 263.5 204 65.2
Pp3c4_19060 Physcomitrium patens HOM05D005215 ORTHO05D006382 9.4e-68 260.8 172 71.5
Lalb_Chr02g0146211 Lupinus albus HOM05D005215 ORTHO05D006382 1.8e-66 256.5 145 80.7
Lalb_Chr06g0166341 Lupinus albus HOM05D005215 ORTHO05D006382 2.3e-66 256.1 145 80.7
A04p29510 Brassica napus HOM05D005215 ORTHO05D006382 7.4e-65 251.1 145 78.6
CBR_g39962 Chara braunii HOM05D005215 ORTHO05D006382 3.1e-55 219.2 141 70.2
CsaV3_6G004280 Cucumis sativus L. HOM05D005215 ORTHO05D006382 4.5e-54 215.3 113 85.0
Cre03.g146687 Chlamydomonas reinhardtii HOM05D005215 ORTHO05D006382 4.1e-47 192.2 189 49.7
Haze_26289 Corylus avellana HOM05D005215 ORTHO05D006382 1.2e-46 190.7 195 50.3
Ca_25655_v3 Cicer arietinum L. HOM05D000113 ORTHO05D001798 2.2e-45 186.4 125 71.2
Potri.008G019325 Populus trichocarpa HOM05D005215 ORTHO05D006382 5.0e-45 185.3 109 80.7
MCO01G395 Micromonas commoda HOM05D005215 ORTHO05D006382 1.3e-40 170.6 195 45.6
unitig_88.g27810 Utricularia gibba HOM05D005215 ORTHO05D006382 1.1e-39 167.5 88 85.2
Sc06g0000010 Simmondsia chinensis HOM05D005215 ORTHO05D006382 1.2e-35 154.1 97 74.2
PRCOL_00005793 Prasinoderma coloniale HOM05D005215 ORTHO05D006382 2.7e-35 152.9 167 49.7
Dinv02216 Davidia involucrata HOM05D005215 ORTHO05D006382 8.8e-34 147.9 74 89.2
Cfa010328 Carpinus fangiana HOM05D005215 ORTHO05D006382 4.9e-32 142.1 79 83.5
BcaNung04832 Brassica carinata HOM05D005215 ORTHO05D006382 1.8e-31 140.2 100 68.0
Lalb_Chr06g0166351 Lupinus albus HOM05D005215 ORTHO05D006382 9.5e-20 101.3 74 60.8
unitig_88.g27811 Utricularia gibba HOM05D005215 ORTHO05D006382 3.6e-19 99.4 69 63.8
Sabra16G0322800 Salix brachista HOM05D005215 ORTHO05D006382 2.3e-18 96.7 59 74.6
Lalb_Chr02g0146221 Lupinus albus HOM05D005215 ORTHO05D006382 1.5e-17 94.0 66 63.6
Actinidia27053 Actinidia chinensis HOM05D005215 ORTHO05D006382 2.9e-16 89.7 60 71.7
GSVIVG01037606001 Vitis vinifera HOM05D005215 ORTHO05D014194 1.8e-10 70.5 35 85.7
Peaxi162Scf00959g00416 Petunia axillaris HOM05D005215 ORTHO05D006382 5.2e-10 68.9 40 82.5
Migut.F00867 Erythranthe guttata HOM05D012249 ORTHO05D014194 1.7e-08 63.9 35 80.0
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 4.1e-07 59.3 32 81.2
Peaxi162Scf00959g00417 Petunia axillaris HOM05D005215 ORTHO05D306904 9.2e-07 58.2 59 54.2


User provided reference genes

Program Settings