Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G1010 Trochodendron aralioides HOM05D005110 ORTHO05D006074 1.7e-61 239.2 125 100.0
Nn2g14215 Nelumbo nucifera HOM05D005110 ORTHO05D006074 2.7e-38 162.2 125 69.6
Dinv22825 Davidia involucrata HOM05D005110 ORTHO05D006074 2.8e-32 142.1 126 63.5
Duzib150G1383 Durio zibethinus HOM05D005110 ORTHO05D006074 1.1e-31 140.2 125 64.0
Gohir.D05G082600 Gossypium hirsutum HOM05D005110 ORTHO05D006074 2.4e-31 139.0 125 63.2
Gorai.009G084200 Gossypium raimondii HOM05D005110 ORTHO05D006074 2.4e-31 139.0 125 63.2
Duzib168G1438 Durio zibethinus HOM05D005110 ORTHO05D006074 3.1e-31 138.7 126 61.9
Glyma.12G091100 Glycine max HOM05D005110 ORTHO05D006074 5.4e-31 137.9 126 61.9
Gohir.A05G079700 Gossypium hirsutum HOM05D005110 ORTHO05D006074 5.4e-31 137.9 125 63.2
MBI17_g32417_MAGBIO Magnolia biondii HOM05D005110 ORTHO05D006074 5.4e-31 137.9 126 59.5
GSVIVG01036094001 Vitis vinifera HOM05D005110 ORTHO05D006074 2.0e-30 136.0 127 63.0
QL01p011992 Quercus lobata HOM05D005110 ORTHO05D006074 2.7e-30 135.6 126 62.7
TPR.G17227 Trifolium pratense HOM05D005110 ORTHO05D006074 3.5e-30 135.2 125 63.2
Aqoxy4G02728 Aquilegia oxysepala HOM05D005110 ORTHO05D006074 7.8e-30 134.0 123 65.0
Glyma.11G182100 Glycine max HOM05D005110 ORTHO05D006074 1.0e-29 133.7 127 60.6
Dinv42535 Davidia involucrata HOM05D005110 ORTHO05D006074 1.3e-29 133.3 126 59.5
Prupe.6G134300 Prunus persica HOM05D005110 ORTHO05D006074 1.3e-29 133.3 125 60.0
Lalb_Chr01g0004911 Lupinus albus HOM05D005110 ORTHO05D006074 3.8e-29 131.7 125 60.0
Duzib170G1118 Durio zibethinus HOM05D005110 ORTHO05D006074 5.0e-29 131.3 126 59.5
Lalb_Chr03g0028181 Lupinus albus HOM05D005110 ORTHO05D006074 8.6e-29 130.6 125 58.4
Phvul.011G095400 Phaseolus vulgaris HOM05D005110 ORTHO05D006074 1.1e-28 130.2 125 61.6
arahy.Tifrunner.gnm1.ann1.EYNG7S Arachis hypogaea HOM05D005110 ORTHO05D006074 1.5e-28 129.8 125 62.4
arahy.Tifrunner.gnm1.ann1.XFIF97 Arachis hypogaea HOM05D005110 ORTHO05D006074 2.5e-28 129.0 125 61.6
QL01p011978 Quercus lobata HOM05D005110 ORTHO05D006074 2.5e-28 129.0 128 60.9
MD03G1148100 Malus domestica HOM05D005110 ORTHO05D006074 3.3e-28 128.6 127 55.9
Hma1.2p1_0587F.1_g184070 Hydrangea macrophylla HOM05D005110 ORTHO05D006074 5.6e-28 127.9 127 59.1
Psat7g142160 Pisum sativum HOM05D005110 ORTHO05D006074 5.6e-28 127.9 125 60.0
Potri.009G019300 Populus trichocarpa HOM05D005110 ORTHO05D006074 5.6e-28 127.9 124 60.5
VMungo1127G0906 Vigna mungo HOM05D005110 ORTHO05D006074 5.6e-28 127.9 125 58.4
Thecc.09G280200 Theobroma cacao HOM05D005110 ORTHO05D006074 7.3e-28 127.5 125 59.2
QL01p011973 Quercus lobata HOM05D005110 ORTHO05D006074 9.5e-28 127.1 123 59.3
Lj3g0002892 Lotus japonicus HOM05D005110 ORTHO05D006074 1.6e-27 126.3 126 57.9
MD11G1167600 Malus domestica HOM05D005110 ORTHO05D006074 2.1e-27 125.9 127 56.7
Phvul.005G122600 Phaseolus vulgaris HOM05D005110 ORTHO05D006074 2.1e-27 125.9 127 55.9
Ciclev10029378m.g Citrus clementina HOM05D005110 ORTHO05D006074 2.8e-27 125.6 128 58.6
Glyma.13G315400 Glycine max HOM05D005110 ORTHO05D006074 3.6e-27 125.2 126 57.1
Lalb_Chr19g0136401 Lupinus albus HOM05D005110 ORTHO05D006074 3.6e-27 125.2 125 58.4
Cfa009996 Carpinus fangiana HOM05D005110 ORTHO05D006074 8.0e-27 124.0 129 57.4
FvH4_3g25370 Fragaria vesca HOM05D005110 ORTHO05D006074 1.0e-26 123.6 125 57.6
FAN21G3897 Fragaria x ananassa HOM05D005110 ORTHO05D006074 1.0e-26 123.6 125 57.6
Medtr2g086680 Medicago truncatula HOM05D005110 ORTHO05D006074 1.0e-26 123.6 125 54.4
VMungo1080G1295 Vigna mungo HOM05D005110 ORTHO05D006074 1.0e-26 123.6 124 55.6
TWI79G0870 Tripterygium wilfordii HOM05D005110 ORTHO05D006074 1.8e-26 122.9 127 56.7
Actinidia25117 Actinidia chinensis HOM05D005110 ORTHO05D006074 3.0e-26 122.1 127 56.7
FAN25G3715 Fragaria x ananassa HOM05D005110 ORTHO05D006074 3.0e-26 122.1 125 57.6
Lj2P968T16 Lonicera japonica HOM05D005110 ORTHO05D006074 4.0e-26 121.7 128 55.5
Actinidia37076 Actinidia chinensis HOM05D005110 ORTHO05D006074 5.2e-26 121.3 125 54.4
FAN11G1413 Fragaria x ananassa HOM05D005110 ORTHO05D006074 5.2e-26 121.3 125 56.8
CSS0022586 Camellia sinensis var. sinensis HOM05D005110 ORTHO05D006074 6.8e-26 120.9 125 54.4
COL.COLO4_34021 Corchorus olitorius HOM05D005110 ORTHO05D006074 8.9e-26 120.6 125 57.6
Sabra09G0012800 Salix brachista HOM05D005110 ORTHO05D006074 8.9e-26 120.6 126 55.6
DCAR_010338 Daucus carota HOM05D005110 ORTHO05D006074 9.8e-25 117.1 125 56.0
CiPaw.13G134200 Carya illinoinensis HOM05D005110 ORTHO05D006074 1.7e-24 116.3 132 53.8
TWI31G0848 Tripterygium wilfordii HOM05D005110 ORTHO05D006074 1.7e-24 116.3 128 54.7
HanXRQChr01g0024471 Helianthus annuus HOM05D005110 ORTHO05D006074 2.9e-24 115.5 126 54.8
Cpa.g.sc195.13 Carica papaya HOM05D005110 ORTHO05D006074 3.7e-24 115.2 123 53.7
Lj3g0016581 Lotus japonicus HOM05D005110 ORTHO05D006074 3.7e-24 115.2 125 54.4
Manes.11G163300 Manihot esculenta HOM05D005110 ORTHO05D006074 8.3e-24 114.0 127 52.0
vmacro03324 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 1.1e-23 113.6 129 53.5
MSTRG.18766 Avicennia marina HOM05D005110 ORTHO05D006074 1.9e-23 112.8 127 51.2
MSTRG.21034 Avicennia marina HOM05D005110 ORTHO05D006074 1.9e-23 112.8 124 53.2
PGR102G3267 Punica granatum HOM05D005110 ORTHO05D006074 1.9e-23 112.8 127 53.5
CAN.G919.35 Capsicum annuum HOM05D005110 ORTHO05D006074 2.4e-23 112.5 127 52.8
Lsat_1_v5_gn_1_59041 Lactuca sativa HOM05D005110 ORTHO05D006074 2.4e-23 112.5 125 53.6
PGSC0003DMG400005884 Solanum tuberosum HOM05D005110 ORTHO05D006074 2.4e-23 112.5 126 53.2
CiPaw.14G098700 Carya illinoinensis HOM05D005110 ORTHO05D006074 3.2e-23 112.1 128 56.2
ECA248G3565 Erigeron canadensis HOM05D005110 ORTHO05D006074 3.2e-23 112.1 126 54.0
CANSAT54G0919 Cannabis sativa HOM05D005110 ORTHO05D006074 5.4e-23 111.3 127 53.5
SalBow6G3038 Salvia bowleyana HOM05D005110 ORTHO05D006074 5.4e-23 111.3 130 53.1
Rhsim01G0204600 Rhododendron simsii HOM05D005110 ORTHO05D006074 9.2e-23 110.5 129 52.7
Sopen06g030680 Solanum pennellii HOM05D005110 ORTHO05D006074 1.6e-22 109.8 126 53.2
Nitab4.5_0000937g0070 Nicotiana tabacum HOM05D005110 ORTHO05D006074 3.5e-22 108.6 128 52.3
Oeu035569.1 Olea europaea HOM05D005110 ORTHO05D006074 3.5e-22 108.6 126 52.4
Rhsim13G0112900 Rhododendron simsii HOM05D005110 ORTHO05D006074 3.5e-22 108.6 130 52.3
Psat5g259000 Pisum sativum HOM05D005110 ORTHO05D006074 7.8e-22 107.5 125 48.8
Atru.chr3.3190 Acer truncatum HOM05D005110 ORTHO05D006074 1.3e-21 106.7 130 54.6
Solyc06g074260.4 Solanum lycopersicum HOM05D005110 ORTHO05D006074 1.3e-21 106.7 126 52.4
TAR623G0362 Trochodendron aralioides HOM05D005110 ORTHO05D006074 1.3e-21 106.7 85 78.8
Nitab4.5_0005472g0010 Nicotiana tabacum HOM05D005110 ORTHO05D006074 2.3e-21 105.9 128 50.8
Oeu002365.1 Olea europaea HOM05D005110 ORTHO05D006074 3.9e-21 105.1 124 50.8
vmacro14345 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 3.9e-21 105.1 137 49.6
HanXRQChr13g0426031 Helianthus annuus HOM05D005110 ORTHO05D006074 5.0e-21 104.8 125 50.4
Eucgr.B03836 Eucalyptus grandis HOM05D005110 ORTHO05D006074 8.6e-21 104.0 141 46.8
Cc01_g08910 Coffea canephora HOM05D005110 ORTHO05D006074 1.1e-20 103.6 128 51.6
Peaxi162Scf00091g00622 Petunia axillaris HOM05D005110 ORTHO05D006074 1.1e-20 103.6 127 52.8
CsaV3_6G038400 Cucumis sativus L. HOM05D005110 ORTHO05D006074 1.9e-20 102.8 126 50.8
Hund18768 Selenicereus undatus HOM05D005110 ORTHO05D006074 4.3e-20 101.7 130 46.2
ClCG02G022270 Citrullus lanatus HOM05D005110 ORTHO05D006074 9.5e-20 100.5 126 50.8
MELO3C014504.2 Cucumis melo HOM05D005110 ORTHO05D006074 9.5e-20 100.5 126 50.0
Oeu027156.1 Olea europaea HOM05D005110 ORTHO05D006074 9.5e-20 100.5 124 51.6
CSS0002660 Camellia sinensis var. sinensis HOM05D005110 ORTHO05D006074 4.7e-19 98.2 126 50.0
Sc06g0008710 Simmondsia chinensis HOM05D005110 ORTHO05D006074 6.2e-19 97.8 131 45.8
SGA_v2.0_scaffold22G09852 Striga asiatica HOM05D005110 ORTHO05D006074 6.2e-19 97.8 126 49.2
Migut.D02434 Erythranthe guttata HOM05D005110 ORTHO05D006074 8.0e-19 97.4 127 48.0
ClCG01G012070 Citrullus lanatus HOM05D005110 ORTHO05D006074 1.1e-18 97.1 131 44.3
Sed0010097 Sechium edule HOM05D005110 ORTHO05D006074 1.8e-18 96.3 130 50.0
Hund20930 Selenicereus undatus HOM05D005110 ORTHO05D006074 3.1e-18 95.5 129 45.0
THA.LOC104800521 Tarenaya hassleriana HOM05D005110 ORTHO05D006074 4.0e-18 95.1 127 48.0
CARHR119990 Cardamine hirsuta HOM05D005110 ORTHO05D006074 8.9e-18 94.0 123 48.8
HPP92_011908 Vanilla planifolia HOM05D005110 ORTHO05D006074 8.9e-18 94.0 123 48.0
BraA07t29533Z Brassica rapa HOM05D005110 ORTHO05D006074 3.4e-17 92.0 123 48.8
CsaV3_1G014930 Cucumis sativus L. HOM05D005110 ORTHO05D006074 4.4e-17 91.7 128 44.5
CsaV3_1G015850 Cucumis sativus L. HOM05D005110 ORTHO05D006074 4.4e-17 91.7 128 44.5
A07p18150 Brassica napus HOM05D005110 ORTHO05D006074 5.8e-17 91.3 123 48.8
BcaB02g10088 Brassica carinata HOM05D005110 ORTHO05D006074 1.7e-16 89.7 123 48.0
DCAR_012208 Daucus carota HOM05D005110 ORTHO05D006074 2.9e-16 89.0 125 47.2
Thhalv10002110m.g Eutrema salsugineum HOM05D005110 ORTHO05D006074 6.4e-16 87.8 123 47.2
C04p24220 Brassica napus HOM05D005110 ORTHO05D006074 8.3e-16 87.4 123 47.2
BolC4t23920H Brassica oleracea HOM05D005110 ORTHO05D006074 8.3e-16 87.4 123 47.2
Carub.0004s0802 Capsella rubella HOM05D005110 ORTHO05D006074 1.4e-15 86.7 123 49.6
Sp4g10180 Schrenkiella parvula HOM05D005110 ORTHO05D006074 1.4e-15 86.7 123 47.2
BcaC02g10869 Brassica carinata HOM05D005110 ORTHO05D006074 1.9e-15 86.3 123 46.3
MELO3C004693.2 Cucumis melo HOM05D005110 ORTHO05D006074 2.4e-15 85.9 132 44.7
AT2G27385 Arabidopsis thaliana HOM05D005110 ORTHO05D006074 4.1e-15 85.1 123 47.2
arahy.Tifrunner.gnm1.ann1.GADS7N Arachis hypogaea HOM05D005110 ORTHO05D006074 4.1e-15 85.1 128 43.8
arahy.Tifrunner.gnm1.ann1.NUG06Z Arachis hypogaea HOM05D005110 ORTHO05D006074 5.4e-15 84.7 130 43.8
AL4G21340 Arabidopsis lyrata HOM05D005110 ORTHO05D006074 7.0e-15 84.3 123 46.3
AL6G33450 Arabidopsis lyrata HOM05D005110 ORTHO05D006074 9.2e-15 84.0 125 45.6
BcaB08g36432 Brassica carinata HOM05D000477 ORTHO05D006074 1.7e-13 79.7 125 45.6
C02p10870 Brassica napus HOM05D005110 ORTHO05D006074 5.1e-13 78.2 126 46.0
AT5G22430 Arabidopsis thaliana HOM05D005110 ORTHO05D006074 8.6e-13 77.4 125 43.2
Thhalv10014830m.g Eutrema salsugineum HOM05D005110 ORTHO05D006074 8.6e-13 77.4 123 43.9
Carub.0006s2017 Capsella rubella HOM05D005110 ORTHO05D006074 1.1e-12 77.0 125 45.6
BcaB05g22726 Brassica carinata HOM05D005110 ORTHO05D006074 2.5e-12 75.9 126 45.2
ATR0580G107 Amborella trichopoda HOM05D005110 ORTHO05D006074 3.3e-12 75.5 137 43.8
Sp6g22820 Schrenkiella parvula HOM05D005110 ORTHO05D006074 3.3e-12 75.5 125 45.6
BraA02t05659Z Brassica rapa HOM05D005110 ORTHO05D006074 5.6e-12 74.7 126 45.2
BolC2t07157H Brassica oleracea HOM05D005110 ORTHO05D006074 1.6e-11 73.2 126 44.4
CARHR191100 Cardamine hirsuta HOM05D005110 ORTHO05D006074 1.6e-11 73.2 125 45.6
Aa31LG1G13130 Aethionema arabicum HOM05D005110 ORTHO05D006074 2.1e-11 72.8 120 48.3
HPP92_005471 Vanilla planifolia HOM05D005110 ORTHO05D006074 2.3e-10 69.3 142 37.3
BNapus_Darmor_BZH_scaffold_38p00660 Brassica napus HOM05D005110 ORTHO05D006074 3.1e-10 68.9 120 41.7
MSTRG.17701 Avicennia marina HOM05D005110 ORTHO05D006074 6.8e-10 67.8 126 42.1
THA.LOC104810920 Tarenaya hassleriana HOM05D005110 ORTHO05D006074 4.4e-09 65.1 124 39.5
BcaC03g13883 Brassica carinata HOM05D005110 ORTHO05D006074 3.5e-06 55.5 94 43.6


User provided reference genes

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