Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G1000 Trochodendron aralioides HOM05D000184 ORTHO05D000032 1.2e-61 239.6 116 100.0
TAR623G0814 Trochodendron aralioides HOM05D000184 ORTHO05D000032 1.9e-22 109.4 77 68.8
TAR633G2361 Trochodendron aralioides HOM05D000184 ORTHO05D000032 1.8e-17 92.8 74 64.9
Duzib128G0138 Durio zibethinus HOM05D000184 ORTHO05D000032 2.1e-13 79.3 71 63.4
Ca_12088_v3 Cicer arietinum L. HOM05D000184 ORTHO05D000032 1.4e-12 76.6 75 50.7
Haze_19972 Corylus avellana HOM05D000184 ORTHO05D000032 1.8e-12 76.3 71 59.2
MD14G1059400 Malus domestica HOM05D000184 ORTHO05D000032 2.3e-12 75.9 81 51.9
Thecc.05G169800 Theobroma cacao HOM05D000184 ORTHO05D000032 5.2e-12 74.7 71 60.6
Nn2g15622 Nelumbo nucifera HOM05D000184 ORTHO05D000032 8.8e-12 73.9 67 62.7
Duzib093G1944 Durio zibethinus HOM05D000184 ORTHO05D000032 2.0e-11 72.8 71 57.7
Medtr1g053835 Medicago truncatula HOM05D000184 ORTHO05D000032 2.0e-11 72.8 75 50.7
COL.COLO4_36147 Corchorus olitorius HOM05D000184 ORTHO05D000032 5.7e-11 71.2 71 56.3
Prupe.7G075300 Prunus persica HOM05D000184 ORTHO05D000032 5.7e-11 71.2 72 56.9
QL07p023341 Quercus lobata HOM05D000184 ORTHO05D000032 5.7e-11 71.2 71 56.3
Aqoxy1G00166 Aquilegia oxysepala HOM05D000184 ORTHO05D000032 1.7e-10 69.7 74 55.4
arahy.Tifrunner.gnm1.ann1.019HRU Arachis hypogaea HOM05D000184 ORTHO05D000032 2.2e-10 69.3 73 58.9
Nn7g36033 Nelumbo nucifera HOM05D000184 ORTHO05D000032 2.2e-10 69.3 73 58.9
TPR.G24148 Trifolium pratense HOM05D000184 ORTHO05D000032 3.7e-10 68.6 75 52.0
Manes.08G045400 Manihot esculenta HOM05D000184 ORTHO05D000032 8.3e-10 67.4 75 52.0
Ah.04g152380 Amaranthus hybridus HOM05D000184 ORTHO05D000032 1.1e-09 67.0 70 54.3
Haze_03261 Corylus avellana HOM05D000184 ORTHO05D029151 2.4e-09 65.9 68 55.9
Glyma.02G178100 Glycine max HOM05D000184 ORTHO05D000032 2.4e-09 65.9 74 51.4
Medtr7g093030 Medicago truncatula HOM05D000184 ORTHO05D000032 2.4e-09 65.9 75 52.0
Nn1g02006 Nelumbo nucifera HOM05D001165 ORTHO05D001347 3.1e-09 65.5 67 56.7
Phvul.007G258700 Phaseolus vulgaris HOM05D000184 ORTHO05D000032 3.1e-09 65.5 72 50.0
Sabra16G0136500 Salix brachista HOM05D000184 ORTHO05D000032 3.1e-09 65.5 94 42.6
Atru.chr8.1073 Acer truncatum HOM05D000184 ORTHO05D000032 4.1e-09 65.1 67 56.7
RcHm_v2.0_Chr3g0480031 Rosa chinensis HOM05D000184 ORTHO05D000032 4.1e-09 65.1 69 50.7
VMungo1383G2112 Vigna mungo HOM05D000184 ORTHO05D000032 4.1e-09 65.1 73 54.8
Potri.006G191000 Populus trichocarpa HOM05D000184 ORTHO05D000032 5.4e-09 64.7 74 51.4
AUR62012048 Chenopodium quinoa HOM05D000184 ORTHO05D000032 7.0e-09 64.3 75 50.7
AUR62024316 Chenopodium quinoa HOM05D000184 ORTHO05D000032 7.0e-09 64.3 75 50.7
Aqoxy1G04112 Aquilegia oxysepala HOM05D000184 ORTHO05D000032 9.1e-09 63.9 75 52.0
CiPaw.09G031600 Carya illinoinensis HOM05D000184 ORTHO05D000032 9.1e-09 63.9 69 55.1
Potri.001G228500 Populus trichocarpa HOM05D000184 ORTHO05D000032 9.1e-09 63.9 76 47.4
Aqoxy1G03786 Aquilegia oxysepala HOM05D000184 ORTHO05D000032 1.2e-08 63.5 75 53.3
Phvul.001G141600 Phaseolus vulgaris HOM05D000184 ORTHO05D000032 1.6e-08 63.2 75 49.3
Actinidia21572 Actinidia chinensis HOM05D000184 ORTHO05D000032 2.0e-08 62.8 77 45.5
Actinidia22023 Actinidia chinensis HOM05D000184 ORTHO05D000032 2.0e-08 62.8 74 51.4
Actinidia40439 Actinidia chinensis HOM05D000184 ORTHO05D000032 2.0e-08 62.8 58 60.3
MD12G1058400 Malus domestica HOM05D000184 ORTHO05D000032 2.0e-08 62.8 72 51.4
Actinidia17266 Actinidia chinensis HOM05D000184 ORTHO05D000032 2.7e-08 62.4 66 53.0
Rhsim03G0008500 Rhododendron simsii HOM05D000184 ORTHO05D000032 2.7e-08 62.4 46 65.2
Sabra06G0146300 Salix brachista HOM05D000184 ORTHO05D000032 3.5e-08 62.0 74 48.6
Manes.09G033500 Manihot esculenta HOM05D000184 ORTHO05D000032 5.9e-08 61.2 75 48.0
vmacro07931 Vaccinium macrocarpon HOM05D000184 ORTHO05D000032 5.9e-08 61.2 46 63.0
Sc13g0002190 Simmondsia chinensis HOM05D000184 ORTHO05D000032 7.7e-08 60.8 75 46.7
TPR.G13233 Trifolium pratense HOM05D000184 ORTHO05D000032 7.7e-08 60.8 75 49.3
FvH4_6g22540 Fragaria vesca HOM05D000184 ORTHO05D000032 1.0e-07 60.5 69 49.3
FAN14G3489 Fragaria x ananassa HOM05D000184 ORTHO05D000032 1.0e-07 60.5 69 49.3
Glyma.03G143600 Glycine max HOM05D000184 ORTHO05D000032 1.0e-07 60.5 59 57.6
Lj5g0027124 Lotus japonicus HOM05D000184 ORTHO05D000032 1.0e-07 60.5 69 50.7
Psat0s238g0080 Pisum sativum HOM05D000184 ORTHO05D000032 1.0e-07 60.5 75 49.3
Gohir.A01G192250 Gossypium hirsutum HOM05D000184 ORTHO05D000032 1.3e-07 60.1 71 52.1
arahy.Tifrunner.gnm1.ann1.69RPC9 Arachis hypogaea HOM05D000184 ORTHO05D000032 1.7e-07 59.7 54 63.0
Dinv14282 Davidia involucrata HOM05D000184 ORTHO05D000032 1.7e-07 59.7 53 60.4
PGR004G2577 Punica granatum HOM05D000184 ORTHO05D000032 1.7e-07 59.7 78 50.0
VMungo0720G1481 Vigna mungo HOM05D000184 ORTHO05D000032 1.7e-07 59.7 60 55.0
FAN02G2304 Fragaria x ananassa HOM05D000184 ORTHO05D000032 2.3e-07 59.3 69 47.8
TWI74G1379 Tripterygium wilfordii HOM05D000184 ORTHO05D000032 2.3e-07 59.3 108 39.8
CSS0005408 Camellia sinensis var. sinensis HOM05D000184 ORTHO05D000032 2.9e-07 58.9 53 58.5
CSS0017966 Camellia sinensis var. sinensis HOM05D000184 ORTHO05D000032 2.9e-07 58.9 53 58.5
Glyma.19G146600 Glycine max HOM05D000184 ORTHO05D000032 2.9e-07 58.9 75 50.7
Gohir.D01G177700 Gossypium hirsutum HOM05D000184 ORTHO05D000032 2.9e-07 58.9 71 50.7
Potri.016G047900 Populus trichocarpa HOM05D000184 ORTHO05D000032 2.9e-07 58.9 75 46.7
FAN05G3548 Fragaria x ananassa HOM05D000184 ORTHO05D000032 3.8e-07 58.5 69 47.8
Gorai.002G225400 Gossypium raimondii HOM05D000184 ORTHO05D000032 3.8e-07 58.5 71 50.7
EL10Ac3g06934 Beta vulgaris HOM05D000184 ORTHO05D000032 6.6e-07 57.8 75 45.3
CiPaw.10G027300 Carya illinoinensis HOM05D000184 ORTHO05D000032 6.6e-07 57.8 71 49.3
MBI04_g32788_MAGBIO Magnolia biondii HOM05D000184 ORTHO05D000032 6.6e-07 57.8 61 55.7
Psat6g121280 Pisum sativum HOM05D000184 ORTHO05D000032 6.6e-07 57.8 59 54.2
CAN.G128.36 Capsicum annuum HOM05D000184 ORTHO05D000032 8.6e-07 57.4 42 57.1
arahy.Tifrunner.gnm1.ann1.MI35X1 Arachis hypogaea HOM05D000184 ORTHO05D000032 1.1e-06 57.0 74 52.7
arahy.Tifrunner.gnm1.ann1.T25X4W Arachis hypogaea HOM05D000184 ORTHO05D000032 1.1e-06 57.0 54 61.1
FAN14G2321 Fragaria x ananassa HOM05D000184 ORTHO05D000032 1.1e-06 57.0 65 47.7
Cpa.g.sc85.82 Carica papaya HOM05D000184 ORTHO05D000032 1.5e-06 56.6 76 43.4
Dinv43925 Davidia involucrata HOM05D000184 ORTHO05D000032 1.5e-06 56.6 94 40.4
Hma1.2p1_0183F.1_g080780 Hydrangea macrophylla HOM05D000184 ORTHO05D000032 1.9e-06 56.2 53 56.6
GSVIVG01033515001 Vitis vinifera HOM05D000184 ORTHO05D000032 2.5e-06 55.8 47 66.0
GSVIVG01001374001 Vitis vinifera HOM05D000184 ORTHO05D000032 3.3e-06 55.5 61 54.1
Lj1g0007211 Lotus japonicus HOM05D000184 ORTHO05D000032 5.5e-06 54.7 47 59.6
Nitab4.5_0000016g0360 Nicotiana tabacum HOM05D000184 ORTHO05D000032 7.2e-06 54.3 70 42.9
Oeu061764.1 Olea europaea HOM05D000184 ORTHO05D000032 7.2e-06 54.3 45 55.6
SalBow6G5076 Salvia bowleyana HOM05D000184 ORTHO05D000032 7.2e-06 54.3 34 70.6
SalBow6G5514 Salvia bowleyana HOM05D000184 ORTHO05D000032 7.2e-06 54.3 34 70.6
ClCG04G002100 Citrullus lanatus HOM05D000184 ORTHO05D000032 9.5e-06 53.9 63 49.2
Nitab4.5_0001538g0090 Nicotiana tabacum HOM05D000184 ORTHO05D000032 9.5e-06 53.9 61 49.2
Peaxi162Scf00258g00225 Petunia axillaris HOM05D000184 ORTHO05D000032 9.5e-06 53.9 53 52.8
Sed0007910 Sechium edule HOM05D000184 ORTHO05D000032 9.5e-06 53.9 61 49.2


User provided reference genes

Program Settings