Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G0988 Trochodendron aralioides HOM05D006193 ORTHO05D007808 3.2e-187 658.3 337 100.0
TAR623G1160 Trochodendron aralioides HOM05D006193 ORTHO05D007808 4.3e-59 232.6 131 87.0
Nn2g10831 Nelumbo nucifera HOM05D006193 ORTHO05D007808 7.6e-56 221.9 130 83.8
Duzib114G0385 Durio zibethinus HOM05D006193 ORTHO05D007808 3.5e-53 213.0 123 81.3
Gohir.D06G175300 Gossypium hirsutum HOM05D006193 ORTHO05D007808 8.7e-52 208.4 123 80.5
Gorai.010G205700 Gossypium raimondii HOM05D006193 ORTHO05D007808 8.7e-52 208.4 123 80.5
Manes.10G047101 Manihot esculenta HOM05D006193 ORTHO05D007808 1.3e-50 204.5 129 76.0
Gohir.A06G167900 Gossypium hirsutum HOM05D006193 ORTHO05D007808 1.6e-50 204.1 123 78.9
Thecc.10G076000 Theobroma cacao HOM05D006193 ORTHO05D007808 1.6e-50 204.1 123 78.0
COL.COLO4_28414 Corchorus olitorius HOM05D006193 ORTHO05D007808 4.8e-50 202.6 122 77.9
MBI07_g44648_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 4.8e-50 202.6 127 77.2
Actinidia38857 Actinidia chinensis HOM05D006193 ORTHO05D007808 1.8e-49 200.7 129 76.0
Haze_16878 Corylus avellana HOM05D006193 ORTHO05D007808 1.8e-49 200.7 144 67.4
Cfa001656 Carpinus fangiana HOM05D006193 ORTHO05D007808 2.0e-48 197.2 124 72.6
Duzib128G0799 Durio zibethinus HOM05D006193 ORTHO05D007808 2.0e-48 197.2 133 72.2
Cfa001990 Carpinus fangiana HOM05D006193 ORTHO05D007808 3.4e-48 196.4 121 73.6
Atru.chr12.797 Acer truncatum HOM05D006193 ORTHO05D007808 5.9e-48 195.7 121 77.7
PSO832G3015 Papaver somniferum HOM05D006193 ORTHO05D007808 1.7e-47 194.1 131 72.5
Aqoxy1G03645 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 2.9e-47 193.4 132 75.0
Ciclev10033053m.g Citrus clementina HOM05D006193 ORTHO05D007808 6.5e-47 192.2 128 71.9
ECA248G2014 Erigeron canadensis HOM05D006193 ORTHO05D007808 8.4e-47 191.8 123 74.0
Migut.F01979 Erythranthe guttata HOM05D006193 ORTHO05D007808 8.4e-47 191.8 125 74.4
HanXRQChr08g0229761 Helianthus annuus HOM05D006193 ORTHO05D007808 8.4e-47 191.8 112 79.5
HanXRQChr01g0023971 Helianthus annuus HOM05D006193 ORTHO05D007808 1.1e-46 191.4 111 79.3
Migut.D01650 Erythranthe guttata HOM05D006193 ORTHO05D007808 2.5e-46 190.3 125 73.6
PSO210G4078 Papaver somniferum HOM05D006193 ORTHO05D007808 2.5e-46 190.3 112 80.4
QL08p055470 Quercus lobata HOM05D006193 ORTHO05D007808 2.5e-46 190.3 119 76.5
MSTRG.27474 Avicennia marina HOM05D006193 ORTHO05D007808 5.5e-46 189.1 123 74.0
Lsat_1_v5_gn_1_77620 Lactuca sativa HOM05D006193 ORTHO05D007808 7.2e-46 188.7 120 74.2
TWI63G1140 Tripterygium wilfordii HOM05D006193 ORTHO05D007808 2.7e-45 186.8 170 58.2
CiPaw.02G173400 Carya illinoinensis HOM05D006193 ORTHO05D007808 4.6e-45 186.0 104 80.8
PGR044G2737 Punica granatum HOM05D006193 ORTHO05D007808 4.6e-45 186.0 123 73.2
CSS0007064 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 1.8e-44 184.1 137 68.6
CiPaw.16G031600 Carya illinoinensis HOM05D006193 ORTHO05D007808 2.3e-44 183.7 117 76.9
SalBow4G2149 Salvia bowleyana HOM05D006193 ORTHO05D007808 2.3e-44 183.7 165 57.0
ATR0329G030 Amborella trichopoda HOM05D006193 ORTHO05D007808 3.0e-44 183.3 112 76.8
AL7G42250 Arabidopsis lyrata HOM05D006193 ORTHO05D007808 8.7e-44 181.8 116 73.3
Prupe.2G212200 Prunus persica HOM05D006193 ORTHO05D007808 1.1e-43 181.4 105 79.0
DCAR_016552 Daucus carota HOM05D006193 ORTHO05D007808 2.5e-43 180.3 109 77.1
FvH4_7g19210 Fragaria vesca HOM05D006193 ORTHO05D007808 3.3e-43 179.9 105 79.0
Eucgr.J01081 Eucalyptus grandis HOM05D006193 ORTHO05D007808 5.7e-43 179.1 105 78.1
Thhalv10026557m.g Eutrema salsugineum HOM05D006193 ORTHO05D007808 7.4e-43 178.7 123 69.9
BcaB04g18121 Brassica carinata HOM05D006193 ORTHO05D007808 9.7e-43 178.3 127 67.7
RcHm_v2.0_Chr1g0363061 Rosa chinensis HOM05D006193 ORTHO05D007808 9.7e-43 178.3 110 73.6
Sed0026653 Sechium edule HOM05D006193 ORTHO05D007808 9.7e-43 178.3 115 71.3
THA.LOC104808680 Tarenaya hassleriana HOM05D006193 ORTHO05D007808 9.7e-43 178.3 120 72.5
Os03g0288400 Oryza sativa ssp. japonica HOM05D006193 ORTHO05D007808 1.3e-42 177.9 121 70.2
AT4G14145 Arabidopsis thaliana HOM05D006193 ORTHO05D007808 1.6e-42 177.6 113 72.6
Sp7g11980 Schrenkiella parvula HOM05D006193 ORTHO05D007808 2.2e-42 177.2 122 68.0
CANSAT54G0886 Cannabis sativa HOM05D006193 ORTHO05D007808 3.7e-42 176.4 115 76.5
CDE03G0070 Ceratophyllum demersum HOM05D006193 ORTHO05D007808 3.7e-42 176.4 115 67.8
Lalb_Chr01g0009491 Lupinus albus HOM05D006193 ORTHO05D007808 3.7e-42 176.4 108 74.1
SGA_v2.0_scaffold355G49780 Striga asiatica HOM05D006193 ORTHO05D007808 4.8e-42 176.0 127 67.7
TPR.G1973 Trifolium pratense HOM05D006193 ORTHO05D007808 4.8e-42 176.0 104 78.8
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 6.3e-42 175.6 105 77.1
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 6.3e-42 175.6 105 77.1
Sed0026413 Sechium edule HOM05D006193 ORTHO05D007808 8.2e-42 175.3 103 77.7
Carub.0007s2828 Capsella rubella HOM05D006193 ORTHO05D007808 1.4e-41 174.5 116 69.8
Potri.010G223700 Populus trichocarpa HOM05D006193 ORTHO05D007808 1.4e-41 174.5 130 69.2
arahy.Tifrunner.gnm1.ann1.4G5N71 Arachis hypogaea HOM05D006193 ORTHO05D007808 3.1e-41 173.3 112 73.2
MD01G1107500 Malus domestica HOM05D006193 ORTHO05D007808 3.1e-41 173.3 103 76.7
Lj5g0007819 Lotus japonicus HOM05D006193 ORTHO05D007808 4.1e-41 172.9 112 70.5
Glyma.10G210100 Glycine max HOM05D006193 ORTHO05D007808 5.3e-41 172.6 99 80.8
Sopen03g003450 Solanum pennellii HOM05D006193 ORTHO05D007808 5.3e-41 172.6 127 65.4
Zm00001eb062340 Zea mays HOM05D006193 ORTHO05D007808 6.9e-41 172.2 122 68.9
arahy.Tifrunner.gnm1.ann1.889ECD Arachis hypogaea HOM05D006193 ORTHO05D007808 9.0e-41 171.8 112 73.2
Solyc03g007490.3 Solanum lycopersicum HOM05D006193 ORTHO05D007808 9.0e-41 171.8 121 68.6
Oeu014384.2 Olea europaea HOM05D006193 ORTHO05D007808 1.5e-40 171.0 154 59.1
PGSC0003DMG400009070 Solanum tuberosum HOM05D006193 ORTHO05D007808 1.5e-40 171.0 124 66.1
BolC8t48104H Brassica oleracea HOM05D006193 ORTHO05D007808 2.0e-40 170.6 103 77.7
CAN.G108.21 Capsicum annuum HOM05D006193 ORTHO05D007808 3.4e-40 169.9 125 64.0
A08p10360 Brassica napus HOM05D006193 ORTHO05D007808 4.5e-40 169.5 103 76.7
BraA08t33036Z Brassica rapa HOM05D006193 ORTHO05D007808 4.5e-40 169.5 103 76.7
unitig_37.g12308 Utricularia gibba HOM05D006193 ORTHO05D007808 5.9e-40 169.1 108 73.1
HPP92_011207 Vanilla planifolia HOM05D006193 ORTHO05D007808 5.9e-40 169.1 128 62.5
BcaC07g37722 Brassica carinata HOM05D006193 ORTHO05D007808 7.7e-40 168.7 101 77.2
GSVIVG01016260001 Vitis vinifera HOM05D006193 ORTHO05D007808 7.7e-40 168.7 117 70.1
Oeu042739.1 Olea europaea HOM05D006193 ORTHO05D007808 1.3e-39 167.9 126 66.7
Peaxi162Scf00011g01839 Petunia axillaris HOM05D006193 ORTHO05D007808 1.3e-39 167.9 127 63.8
Aa31LG9G3240 Aethionema arabicum HOM05D006193 ORTHO05D007808 1.7e-39 167.5 123 65.9
CARHR220160 Cardamine hirsuta HOM05D006193 ORTHO05D007808 1.7e-39 167.5 111 70.3
Cc02_g11260 Coffea canephora HOM05D006193 ORTHO05D007808 2.2e-39 167.2 127 64.6
Glyma.20G180500 Glycine max HOM05D006193 ORTHO05D007808 2.2e-39 167.2 99 77.8
VMungo0720G0734 Vigna mungo HOM05D006193 ORTHO05D007808 3.8e-39 166.4 103 74.8
Peaxi162Scf00370g00117 Petunia axillaris HOM05D006193 ORTHO05D007808 6.5e-39 165.6 127 62.2
Nitab4.5_0006507g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 8.5e-39 165.2 111 68.5
Phvul.007G095900 Phaseolus vulgaris HOM05D006193 ORTHO05D007808 8.5e-39 165.2 99 75.8
Nitab4.5_0000071g0090 Nicotiana tabacum HOM05D006193 ORTHO05D007808 1.4e-38 164.5 117 67.5
SGA_v2.0_scaffold250G44987 Striga asiatica HOM05D006193 ORTHO05D007808 3.2e-38 163.3 106 69.8
Hund05693 Selenicereus undatus HOM05D006193 ORTHO05D007808 4.2e-38 162.9 105 75.2
FAN03G1544 Fragaria x ananassa HOM05D006193 ORTHO05D007808 5.5e-38 162.5 97 77.3
SGA_v2.0_scaffold24G10658 Striga asiatica HOM05D006193 ORTHO05D007808 5.5e-38 162.5 122 66.4
Rhsim03G0119300 Rhododendron simsii HOM05D006193 ORTHO05D007808 7.2e-38 162.2 199 47.2
A08p24240 Brassica napus HOM05D006193 ORTHO05D007808 1.6e-37 161.0 115 65.2
ClCG05G021080 Citrullus lanatus HOM05D006193 ORTHO05D007808 2.1e-37 160.6 144 58.3
BcaC01g00219 Brassica carinata HOM05D006193 ORTHO05D007808 6.1e-37 159.1 129 60.5
MELO3C012421.2 Cucumis melo HOM05D006193 ORTHO05D007808 7.9e-37 158.7 147 56.5
BraA08t34379Z Brassica rapa HOM05D006193 ORTHO05D007808 2.3e-36 157.1 114 64.0
Sc20g0001780 Simmondsia chinensis HOM05D006193 ORTHO05D007808 2.3e-36 157.1 154 54.5
Aqoxy1G03181 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 6.7e-36 155.6 120 66.7
Sabra10G0173000 Salix brachista HOM05D006193 ORTHO05D007808 2.0e-35 154.1 169 52.1
Psat6g182760 Pisum sativum HOM05D006193 ORTHO05D007808 2.4e-33 147.1 87 80.5
arahy.Tifrunner.gnm1.ann1.N5AHK9 Arachis hypogaea HOM05D006193 ORTHO05D007808 1.3e-31 141.4 89 76.4
arahy.Tifrunner.gnm1.ann1.D81QGL Arachis hypogaea HOM05D006193 ORTHO05D007808 2.2e-31 140.6 95 71.6
TAR383G0772 Trochodendron aralioides HOM05D006193 ORTHO05D414726 2.9e-31 140.2 109 71.6
MBI07_g30981_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 5.5e-30 136.0 120 60.0
Ca_10561_v3 Cicer arietinum L. HOM05D006193 ORTHO05D007808 1.2e-29 134.8 87 73.6
EL10Ac7g18239 Beta vulgaris HOM05D006193 ORTHO05D007808 1.6e-29 134.4 104 64.4
FAN19G2294 Fragaria x ananassa HOM05D006193 ORTHO05D007808 2.1e-29 134.0 85 78.8
Ah.08g217480 Amaranthus hybridus HOM05D006193 ORTHO05D007808 5.1e-28 129.4 116 57.8
AUR62001381 Chenopodium quinoa HOM05D006193 ORTHO05D007808 2.2e-26 124.0 92 67.4
Mapoly0038s0090 Marchantia polymorpha HOM05D006193 ORTHO05D007808 2.8e-26 123.6 106 56.6
vmacro07063 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 2.4e-25 120.6 68 83.8
Medtr1g094840 Medicago truncatula HOM05D006193 ORTHO05D007808 1.2e-21 108.2 71 69.0
CsaV3_5G036210 Cucumis sativus L. HOM05D006193 ORTHO05D007808 6.1e-21 105.9 62 77.4
FAN06G3393 Fragaria x ananassa HOM05D006193 ORTHO05D007808 8.0e-21 105.5 66 74.2
Lsat_1_v5_gn_2_8120 Lactuca sativa HOM05D006193 ORTHO05D007808 1.8e-20 104.4 96 57.3
BolC3t19959H Brassica oleracea HOM05D006193 ORTHO05D007808 9.7e-19 98.6 79 60.8
AagrBONN_evm.TU.Sc2ySwM_228.264 Anthoceros agrestis HOM05D006193 ORTHO05D007808 1.4e-17 94.7 104 45.2
EL10Ac7g17093 Beta vulgaris HOM05D006193 ORTHO05D007808 1.6e-16 91.3 67 65.7
SMO232G0066 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 1.3e-15 88.2 90 43.3
Pp3c5_20880 Physcomitrium patens HOM05D006193 ORTHO05D007808 6.5e-15 85.9 100 44.0
Potri.008G038500 Populus trichocarpa HOM05D006193 ORTHO05D007808 5.5e-14 82.8 57 70.2
Nitab4.5_0005501g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 1.6e-13 81.3 90 47.8
SMO241G0021 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 2.1e-13 80.9 90 38.9
vmacro07064 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 4.0e-12 76.6 60 60.0
CSS0043670 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 4.2e-06 56.6 68 48.5


User provided reference genes

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