Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G0932 Trochodendron aralioides HOM05D000731 ORTHO05D005852 8.2e-85 317.0 158 100.0
TAR369G1082 Trochodendron aralioides HOM05D000731 ORTHO05D005852 9.8e-38 160.6 117 76.9
MBI05_g36634_MAGBIO Magnolia biondii HOM05D000731 ORTHO05D005852 1.1e-33 147.1 116 71.6
Eucgr.I01531 Eucalyptus grandis HOM05D000731 ORTHO05D005852 4.3e-33 145.2 117 70.1
Rhsim13G0101000 Rhododendron simsii HOM05D000731 ORTHO05D005852 7.3e-33 144.4 117 70.1
Thecc.02G146200 Theobroma cacao HOM05D000731 ORTHO05D005852 9.5e-33 144.1 116 69.8
vmacro17305 Vaccinium macrocarpon HOM05D000731 ORTHO05D005852 1.2e-32 143.7 117 70.1
Dinv24336 Davidia involucrata HOM05D000219 ORTHO05D005852 1.6e-32 143.3 117 69.2
HanXRQChr12g0381751 Helianthus annuus HOM05D000731 ORTHO05D005852 1.6e-32 143.3 117 69.2
TAR633G1916 Trochodendron aralioides HOM05D000731 ORTHO05D005852 2.1e-32 142.9 117 70.9
ECA233G3039 Erigeron canadensis HOM05D000731 ORTHO05D005852 2.8e-32 142.5 116 69.0
Sed0024342 Sechium edule HOM05D000731 ORTHO05D005852 2.8e-32 142.5 116 69.8
PSO063G1122 Papaver somniferum HOM05D000731 ORTHO05D005852 3.6e-32 142.1 116 70.7
PSO782G0947 Papaver somniferum HOM05D000731 ORTHO05D005852 3.6e-32 142.1 116 70.7
ClCG10G009170 Citrullus lanatus HOM05D000731 ORTHO05D005852 4.7e-32 141.7 116 69.8
Ciclev10028471m.g Citrus clementina HOM05D000731 ORTHO05D005852 4.7e-32 141.7 116 68.1
Cfa005622 Carpinus fangiana HOM05D000731 ORTHO05D005852 6.1e-32 141.4 116 68.1
Haze_10644 Corylus avellana HOM05D000731 ORTHO05D005852 6.1e-32 141.4 116 68.1
MELO3C019026.2 Cucumis melo HOM05D000731 ORTHO05D005852 6.1e-32 141.4 116 69.0
CsaV3_4G009320 Cucumis sativus L. HOM05D000731 ORTHO05D005852 6.1e-32 141.4 116 69.0
Rhsim05G0047000 Rhododendron simsii HOM05D000731 ORTHO05D005852 6.1e-32 141.4 117 69.2
Sabra09G0130600 Salix brachista HOM05D004142 ORTHO05D005852 6.1e-32 141.4 116 69.0
Duzib248G0460 Durio zibethinus HOM05D000731 ORTHO05D005852 1.0e-31 140.6 116 68.1
Cpa.g.sc1323.2 Carica papaya HOM05D000731 ORTHO05D005852 1.8e-31 139.8 116 68.1
Lj3g0020438 Lotus japonicus HOM05D000731 ORTHO05D005852 1.8e-31 139.8 116 69.8
Medtr4g030900 Medicago truncatula HOM05D000731 ORTHO05D005852 1.8e-31 139.8 117 69.2
Nn7g37219 Nelumbo nucifera HOM05D000731 ORTHO05D005852 3.0e-31 139.0 116 69.0
Sed0014694 Sechium edule HOM05D000731 ORTHO05D005852 3.0e-31 139.0 116 68.1
CSS0017514 Camellia sinensis var. sinensis HOM05D000731 ORTHO05D005852 4.0e-31 138.7 117 66.7
CSS0027182 Camellia sinensis var. sinensis HOM05D000731 ORTHO05D005852 4.0e-31 138.7 117 66.7
Potri.009G168200 Populus trichocarpa HOM05D000731 ORTHO05D005852 5.2e-31 138.3 116 68.1
TPR.G34131 Trifolium pratense HOM05D000731 ORTHO05D005852 5.2e-31 138.3 117 68.4
Atru.chr5.3557 Acer truncatum HOM05D000731 ORTHO05D005852 6.8e-31 137.9 116 68.1
THA.LOC104806247 Tarenaya hassleriana HOM05D000731 ORTHO05D005852 6.8e-31 137.9 116 66.4
Duzib132G1140 Durio zibethinus HOM05D000731 ORTHO05D005852 8.9e-31 137.5 116 67.2
ECA234G0940 Erigeron canadensis HOM05D000731 ORTHO05D005852 8.9e-31 137.5 117 67.5
Glyma.07G274200 Glycine max HOM05D000731 ORTHO05D005852 8.9e-31 137.5 116 69.0
Cc09_g04770 Coffea canephora HOM05D000731 ORTHO05D005852 1.2e-30 137.1 117 66.7
Gorai.012G139100 Gossypium raimondii HOM05D000731 ORTHO05D005852 1.2e-30 137.1 116 67.2
Lj2P954T10 Lonicera japonica HOM05D000731 ORTHO05D005852 1.5e-30 136.7 117 66.7
Oeu057293.1 Olea europaea HOM05D000731 ORTHO05D005852 1.5e-30 136.7 117 68.4
CiPaw.01G113000 Carya illinoinensis HOM05D000731 ORTHO05D005852 2.0e-30 136.3 116 64.7
CDE03G0303 Ceratophyllum demersum HOM05D000731 ORTHO05D005852 2.0e-30 136.3 117 63.2
MBI14_g32929_MAGBIO Magnolia biondii HOM05D000731 ORTHO05D005852 2.0e-30 136.3 116 67.2
Peaxi162Scf00839g00012 Petunia axillaris HOM05D000731 ORTHO05D005852 2.6e-30 136.0 116 67.2
Psat7g227960 Pisum sativum HOM05D000731 ORTHO05D005852 2.6e-30 136.0 117 65.8
VMungo0647G1129 Vigna mungo HOM05D000731 ORTHO05D005852 2.6e-30 136.0 116 68.1
Aa31LG9G8760 Aethionema arabicum HOM05D000731 ORTHO05D005852 3.4e-30 135.6 116 65.5
Gohir.D04G152300 Gossypium hirsutum HOM05D000731 ORTHO05D005852 3.4e-30 135.6 116 66.4
Nitab4.5_0002278g0020 Nicotiana tabacum HOM05D000731 ORTHO05D005852 3.4e-30 135.6 116 67.2
Solyc12g100130.1 Solanum lycopersicum HOM05D000731 ORTHO05D005852 3.4e-30 135.6 116 69.0
Sopen12g034760 Solanum pennellii HOM05D000731 ORTHO05D005852 3.4e-30 135.6 116 69.0
PGSC0003DMG400023853 Solanum tuberosum HOM05D000731 ORTHO05D005852 3.4e-30 135.6 116 69.0
CANSAT78G1548 Cannabis sativa HOM05D000731 ORTHO05D005852 4.4e-30 135.2 116 66.4
Lalb_Chr03g0033771 Lupinus albus HOM05D000731 ORTHO05D005852 4.4e-30 135.2 116 67.2
Nitab4.5_0000175g0010 Nicotiana tabacum HOM05D000731 ORTHO05D005852 4.4e-30 135.2 116 67.2
Glyma.17G000300 Glycine max HOM05D000731 ORTHO05D005852 5.7e-30 134.8 116 68.1
HanXRQChr17g0564061 Helianthus annuus HOM05D000731 ORTHO05D005852 5.7e-30 134.8 117 66.7
Peaxi162Scf00062g00107 Petunia axillaris HOM05D000731 ORTHO05D005852 5.7e-30 134.8 116 68.1
AUR62015047 Chenopodium quinoa HOM05D000731 ORTHO05D005852 7.5e-30 134.4 116 68.1
AUR62017506 Chenopodium quinoa HOM05D000731 ORTHO05D005852 7.5e-30 134.4 116 68.1
MD02G1271000 Malus domestica HOM05D000731 ORTHO05D005852 7.5e-30 134.4 116 67.2
Prupe.1G563500 Prunus persica HOM05D000731 ORTHO05D005852 7.5e-30 134.4 116 67.2
RcHm_v2.0_Chr5g0051801 Rosa chinensis HOM05D000731 ORTHO05D005852 7.5e-30 134.4 116 67.2
Gohir.D02G194000 Gossypium hirsutum HOM05D000731 ORTHO05D005852 9.8e-30 134.0 116 65.5
Gorai.005G216800 Gossypium raimondii HOM05D000731 ORTHO05D005852 9.8e-30 134.0 116 65.5
Manes.17G005900 Manihot esculenta HOM05D000731 ORTHO05D005852 9.8e-30 134.0 116 67.2
TWI79G0407 Tripterygium wilfordii HOM05D000731 ORTHO05D005852 9.8e-30 134.0 116 65.5
MSTRG.11602 Avicennia marina HOM05D000731 ORTHO05D005852 1.3e-29 133.7 117 67.5
Lsat_1_v5_gn_5_71761 Lactuca sativa HOM05D000731 ORTHO05D005852 1.3e-29 133.7 116 67.2
QL05p058753 Quercus lobata HOM05D000731 ORTHO05D005852 1.3e-29 133.7 115 67.0
BcaC06g31622 Brassica carinata HOM05D000731 ORTHO05D005852 1.7e-29 133.3 116 65.5
BcaC06g34560 Brassica carinata HOM05D000731 ORTHO05D005852 1.7e-29 133.3 116 65.5
A06p47220 Brassica napus HOM05D000731 ORTHO05D005852 1.7e-29 133.3 116 65.5
C07p27170 Brassica napus HOM05D000731 ORTHO05D005852 1.7e-29 133.3 116 65.5
BolC7t43244H Brassica oleracea HOM05D000731 ORTHO05D005852 1.7e-29 133.3 116 65.5
BraA06t27593Z Brassica rapa HOM05D000731 ORTHO05D005852 1.7e-29 133.3 116 65.5
Carub.0008s0410 Capsella rubella HOM05D000731 ORTHO05D005852 1.7e-29 133.3 116 65.5
Ca_22758_v3 Cicer arietinum L. HOM05D000731 ORTHO05D005852 1.7e-29 133.3 117 66.7
Thhalv10003416m.g Eutrema salsugineum HOM05D000731 ORTHO05D005852 1.7e-29 133.3 116 65.5
Os11g0186800 Oryza sativa ssp. japonica HOM05D000731 ORTHO05D005852 1.7e-29 133.3 116 63.8
Sc08g0002180 Simmondsia chinensis HOM05D000731 ORTHO05D005852 1.7e-29 133.3 116 68.1
THA.LOC104812934 Tarenaya hassleriana HOM05D000731 ORTHO05D005852 1.7e-29 133.3 116 64.7
AL8G15520 Arabidopsis lyrata HOM05D000731 ORTHO05D005852 2.2e-29 132.9 116 65.5
AT5G44370 Arabidopsis thaliana HOM05D000731 ORTHO05D005852 2.2e-29 132.9 116 65.5
FvH4_3g28940 Fragaria vesca HOM05D000731 ORTHO05D005852 2.2e-29 132.9 116 66.4
FAN21G2016 Fragaria x ananassa HOM05D000731 ORTHO05D005852 2.2e-29 132.9 116 66.4
Hma1.2p1_0572F.1_g181050 Hydrangea macrophylla HOM05D000731 ORTHO05D005852 2.2e-29 132.9 117 65.0
Oeu000756.1 Olea europaea HOM05D000731 ORTHO05D005852 2.2e-29 132.9 117 65.8
FAN16G0394 Fragaria x ananassa HOM05D000731 ORTHO05D005852 2.9e-29 132.5 116 66.4
Lsat_1_v5_gn_4_30520 Lactuca sativa HOM05D000731 ORTHO05D005852 2.9e-29 132.5 116 64.7
Nitab4.5_0010082g0030 Nicotiana tabacum HOM05D000731 ORTHO05D005852 2.9e-29 132.5 116 68.1
CARHR178760 Cardamine hirsuta HOM05D000731 ORTHO05D005852 4.9e-29 131.7 116 64.7
Actinidia07189 Actinidia chinensis HOM05D000731 ORTHO05D005852 6.4e-29 131.3 95 75.8
Gohir.A03G170900 Gossypium hirsutum HOM05D000731 ORTHO05D005852 6.4e-29 131.3 116 64.7
Nitab4.5_0001925g0030 Nicotiana tabacum HOM05D000731 ORTHO05D005852 6.4e-29 131.3 116 67.2
COL.COLO4_34311 Corchorus olitorius HOM05D000731 ORTHO05D005852 1.4e-28 130.2 116 64.7
Migut.A00017 Erythranthe guttata HOM05D000731 ORTHO05D005852 1.4e-28 130.2 116 63.8
Sp2g09210 Schrenkiella parvula HOM05D000731 ORTHO05D005852 1.4e-28 130.2 116 64.7
BcaC03g16661 Brassica carinata HOM05D000731 ORTHO05D005852 2.4e-28 129.4 116 64.7
PGR142G3313 Punica granatum HOM05D000731 ORTHO05D005852 2.4e-28 129.4 116 65.5
Prupe.8G180300 Prunus persica HOM05D000731 ORTHO05D005852 3.2e-28 129.0 114 65.8
CAN.G575.54 Capsicum annuum HOM05D000731 ORTHO05D005852 4.1e-28 128.6 116 66.4
Nitab4.5_0001925g0010 Nicotiana tabacum HOM05D000731 ORTHO05D005852 4.1e-28 128.6 116 65.5
Nitab4.5_0013627g0010 Nicotiana tabacum HOM05D000731 ORTHO05D005852 4.1e-28 128.6 116 64.7
Migut.E01815 Erythranthe guttata HOM05D000731 ORTHO05D005852 1.2e-27 127.1 117 64.1
Os12g0180100 Oryza sativa ssp. japonica HOM05D000731 ORTHO05D005852 1.2e-27 127.1 116 60.3
QL11p020039 Quercus lobata HOM05D000731 ORTHO05D005852 1.2e-27 127.1 115 63.5
ATR0626G249 Amborella trichopoda HOM05D000731 ORTHO05D005852 2.7e-27 125.9 117 60.7
RcHm_v2.0_Chr6g0280921 Rosa chinensis HOM05D000731 ORTHO05D005852 2.7e-27 125.9 117 65.0
HPP92_000326 Vanilla planifolia HOM05D000731 ORTHO05D005852 3.5e-27 125.6 116 63.8
FvH4_2g16800 Fragaria vesca HOM05D000731 ORTHO05D005852 4.6e-27 125.2 117 65.0
BraA02t07876Z Brassica rapa HOM05D000731 ORTHO05D005852 5.9e-27 124.8 116 62.9
unitig_32.g10880 Utricularia gibba HOM05D000731 ORTHO05D005852 7.8e-27 124.4 117 63.2
Zm00001eb219200 Zea mays HOM05D000731 ORTHO05D005852 7.8e-27 124.4 117 59.0
CDE01G0753 Ceratophyllum demersum HOM05D000731 ORTHO05D005852 1.0e-26 124.0 94 70.2
FAN15G0272 Fragaria x ananassa HOM05D000731 ORTHO05D005852 1.0e-26 124.0 117 64.1
FAN24G1248 Fragaria x ananassa HOM05D000731 ORTHO05D005852 1.0e-26 124.0 117 64.1
RhsimUnG0141400 Rhododendron simsii HOM05D000109 ORTHO05D005852 1.0e-26 124.0 95 72.6
Zm00001eb051610 Zea mays HOM05D000731 ORTHO05D005852 1.7e-26 123.2 117 58.1
Ah.01g002680 Amaranthus hybridus HOM05D000731 ORTHO05D005852 6.6e-26 121.3 107 66.4
Hund00092 Selenicereus undatus HOM05D000731 ORTHO05D005852 2.5e-25 119.4 94 71.3
SEGI_20766 Sequoiadendron giganteum HOM05D000731 ORTHO05D005852 5.6e-25 118.2 128 53.9
FAN25G0665 Fragaria x ananassa HOM05D000731 ORTHO05D005852 7.3e-25 117.9 108 63.0
QL11p056446 Quercus lobata HOM05D000731 ORTHO05D005852 1.5e-22 110.2 96 66.7
FAN11G3476 Fragaria x ananassa HOM05D000731 ORTHO05D005852 1.7e-21 106.7 87 67.8
Lsat_1_v5_gn_5_189741 Lactuca sativa HOM05D000731 ORTHO05D005852 2.3e-18 96.3 94 60.6
Pp3c12_3180 Physcomitrium patens HOM05D000731 ORTHO05D005852 3.9e-18 95.5 116 53.4
Mapoly0045s0073 Marchantia polymorpha HOM05D000731 ORTHO05D005852 3.6e-16 89.0 116 49.1
A02p28390 Brassica napus HOM05D000731 ORTHO05D005852 1.4e-15 87.0 78 64.1
CSS0036501 Camellia sinensis var. sinensis HOM05D000731 ORTHO05D005852 1.8e-15 86.7 80 62.5
CSS0043887 Camellia sinensis var. sinensis HOM05D000731 ORTHO05D005852 1.8e-15 86.7 80 62.5
SMO118G0038 Selaginella moellendorffii HOM05D000731 ORTHO05D005852 6.4e-13 78.2 112 43.8
AagrBONN_evm.TU.Sc2ySwM_344.1031 Anthoceros agrestis HOM05D000731 ORTHO05D005852 9.2e-12 74.3 87 51.7
CBR_g19789 Chara braunii HOM05D000731 ORTHO05D005852 6.0e-11 71.6 137 38.0
Lj9A408G74 Lonicera japonica HOM05D000731 ORTHO05D005852 1.0e-10 70.9 63 61.9
Actinidia26329 Actinidia chinensis HOM05D000731 ORTHO05D005852 7.3e-09 64.7 41 80.5
PRCOL_00006352 Prasinoderma coloniale HOM05D000731 ORTHO05D005852 2.1e-08 63.2 114 37.7
Aqoxy4G01033 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 3.6e-08 62.4 40 77.5
Phvul.002G333800 Phaseolus vulgaris HOM05D000731 ORTHO05D005852 6.2e-08 61.6 58 67.2


User provided reference genes

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