Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G0931 Trochodendron aralioides HOM05D003642 ORTHO05D004460 1.8e-81 305.8 147 100.0
TAR369G0447 Trochodendron aralioides HOM05D003642 ORTHO05D004460 4.8e-71 271.2 147 88.4
Aqoxy2G01228 Aquilegia oxysepala HOM05D003642 ORTHO05D004460 3.4e-69 265.0 147 81.6
Nn6g34944 Nelumbo nucifera HOM05D003642 ORTHO05D004460 1.1e-67 260.0 147 80.3
PSO384G4986 Papaver somniferum HOM05D003642 ORTHO05D004460 1.1e-67 260.0 147 80.3
Atru.chr3.3290 Acer truncatum HOM05D003642 ORTHO05D004460 3.0e-65 251.9 147 78.2
MBI17_g01557_MAGBIO Magnolia biondii HOM05D003642 ORTHO05D004460 3.0e-65 251.9 148 78.4
Nitab4.5_0005324g0040 Nicotiana tabacum HOM05D003642 ORTHO05D004460 3.0e-65 251.9 147 77.6
Nitab4.5_0002002g0040 Nicotiana tabacum HOM05D003642 ORTHO05D004460 1.5e-64 249.6 147 76.9
Phvul.011G093000 Phaseolus vulgaris HOM05D003642 ORTHO05D004460 3.3e-64 248.4 147 78.2
Sopen06g030830 Solanum pennellii HOM05D003642 ORTHO05D004460 3.3e-64 248.4 147 76.9
Glyma.12G088200 Glycine max HOM05D003642 ORTHO05D004460 4.3e-64 248.1 147 78.9
Prupe.6G127500 Prunus persica HOM05D003642 ORTHO05D004460 5.7e-64 247.7 147 76.9
FAN21G1092 Fragaria x ananassa HOM05D003642 ORTHO05D004460 9.7e-64 246.9 147 78.9
FAN25G1659 Fragaria x ananassa HOM05D003642 ORTHO05D004460 9.7e-64 246.9 147 78.9
Hma1.2p1_0305F.1_g119710 Hydrangea macrophylla HOM05D003642 ORTHO05D004460 9.7e-64 246.9 147 75.5
Hma1.2p1_0305F.1_g119720 Hydrangea macrophylla HOM05D003642 ORTHO05D004460 9.7e-64 246.9 147 75.5
Hma1.2p1_0578F.1_g182375 Hydrangea macrophylla HOM05D003642 ORTHO05D004460 9.7e-64 246.9 147 75.5
Lj3g0020685 Lotus japonicus HOM05D003642 ORTHO05D004460 1.3e-63 246.5 147 77.6
Peaxi162Scf00091g00013 Petunia axillaris HOM05D003642 ORTHO05D004460 1.3e-63 246.5 147 74.1
Migut.D02354 Erythranthe guttata HOM05D003642 ORTHO05D004460 1.6e-63 246.1 147 74.8
RcHm_v2.0_Chr5g0044221 Rosa chinensis HOM05D003642 ORTHO05D004460 1.6e-63 246.1 147 79.6
MD03G1142400 Malus domestica HOM05D003642 ORTHO05D004460 2.2e-63 245.7 147 78.2
Ca_19399_v3 Cicer arietinum L. HOM05D003642 ORTHO05D004460 2.8e-63 245.4 147 76.9
CAN.G919.22 Capsicum annuum HOM05D003642 ORTHO05D004460 3.7e-63 245.0 147 74.8
MBI01_g03598_MAGBIO Magnolia biondii HOM05D003642 ORTHO05D004460 3.7e-63 245.0 148 77.7
FAN16G3636 Fragaria x ananassa HOM05D003642 ORTHO05D004460 4.8e-63 244.6 147 78.2
Manes.11G160800 Manihot esculenta HOM05D003642 ORTHO05D004460 4.8e-63 244.6 147 74.8
Actinidia07238 Actinidia chinensis HOM05D003642 ORTHO05D004460 6.3e-63 244.2 147 76.9
Gohir.D07G113300 Gossypium hirsutum HOM05D003642 ORTHO05D004460 6.3e-63 244.2 147 75.5
Gorai.001G121600 Gossypium raimondii HOM05D003642 ORTHO05D004460 6.3e-63 244.2 147 75.5
Solyc06g074370.3 Solanum lycopersicum HOM05D003642 ORTHO05D004460 6.3e-63 244.2 147 74.8
VMungo1127G0822 Vigna mungo HOM05D003642 ORTHO05D004460 8.2e-63 243.8 147 76.9
Duzib170G0814 Durio zibethinus HOM05D003642 ORTHO05D004460 1.1e-62 243.4 147 76.2
Glyma.11G184200 Glycine max HOM05D003642 ORTHO05D004460 1.1e-62 243.4 147 76.9
PGSC0003DMG400007143 Solanum tuberosum HOM05D003642 ORTHO05D004460 1.4e-62 243.0 147 75.5
Gohir.A07G109500 Gossypium hirsutum HOM05D003642 ORTHO05D004460 1.8e-62 242.7 147 74.8
Potri.004G184200 Populus trichocarpa HOM05D003642 ORTHO05D004460 1.8e-62 242.7 147 76.2
Thecc.09G285800 Theobroma cacao HOM05D003642 ORTHO05D004460 1.8e-62 242.7 147 75.5
MELO3C021417.2 Cucumis melo HOM05D003642 ORTHO05D004460 2.4e-62 242.3 147 74.1
Nn2g14115 Nelumbo nucifera HOM05D003642 ORTHO05D004460 2.4e-62 242.3 138 80.4
Lalb_Chr03g0028031 Lupinus albus HOM05D003642 ORTHO05D004460 3.1e-62 241.9 147 75.5
ATR0820G225 Amborella trichopoda HOM05D003642 ORTHO05D004460 4.1e-62 241.5 148 77.0
MD11G1162900 Malus domestica HOM05D003642 ORTHO05D004460 4.1e-62 241.5 145 77.9
Manes.04G004900 Manihot esculenta HOM05D003642 ORTHO05D004460 4.1e-62 241.5 147 75.5
PSO210G3660 Papaver somniferum HOM05D003642 ORTHO05D004460 4.1e-62 241.5 147 74.8
Oeu002383.1 Olea europaea HOM05D003642 ORTHO05D004460 5.3e-62 241.1 147 71.4
TPR.G17216 Trifolium pratense HOM05D003642 ORTHO05D004460 5.3e-62 241.1 147 74.8
Lj1A233T8 Lonicera japonica HOM05D003642 ORTHO05D004460 6.9e-62 240.7 147 75.5
arahy.Tifrunner.gnm1.ann1.U1TIAA Arachis hypogaea HOM05D003642 ORTHO05D004460 9.0e-62 240.4 147 74.8
TAR623G1689 Trochodendron aralioides HOM05D003642 ORTHO05D004460 9.0e-62 240.4 144 78.5
CsaV3_6G015050 Cucumis sativus L. HOM05D003642 ORTHO05D004460 1.2e-61 240.0 147 73.5
CDE08G0849 Ceratophyllum demersum HOM05D003642 ORTHO05D004460 1.5e-61 239.6 146 76.7
COL.COLO4_19910 Corchorus olitorius HOM05D003642 ORTHO05D004460 1.5e-61 239.6 147 74.1
Psat7g189000 Pisum sativum HOM05D003642 ORTHO05D004460 1.5e-61 239.6 147 74.8
Medtr4g053520 Medicago truncatula HOM05D003642 ORTHO05D004460 2.0e-61 239.2 147 72.8
PGR102G1012 Punica granatum HOM05D003642 ORTHO05D004460 2.0e-61 239.2 147 72.1
SGA_v2.0_scaffold22G09875 Striga asiatica HOM05D003642 ORTHO05D004460 2.6e-61 238.8 147 73.5
Gohir.D05G084500 Gossypium hirsutum HOM05D003642 ORTHO05D004460 3.4e-61 238.4 145 75.2
Gohir.A05G081500 Gossypium hirsutum HOM05D003642 ORTHO05D004460 4.5e-61 238.0 145 75.2
SGA_v2.0_scaffold147G36369 Striga asiatica HOM05D003642 ORTHO05D004460 4.5e-61 238.0 147 74.8
CANSAT54G0701 Cannabis sativa HOM05D003642 ORTHO05D004460 5.9e-61 237.7 148 75.0
Duzib150G1635 Durio zibethinus HOM05D003642 ORTHO05D004460 5.9e-61 237.7 145 73.8
Gorai.009G086400 Gossypium raimondii HOM05D003642 ORTHO05D004460 5.9e-61 237.7 145 75.2
Ciclev10028611m.g Citrus clementina HOM05D003642 ORTHO05D004460 1.0e-60 236.9 147 72.8
Cc01_g09370 Coffea canephora HOM05D003642 ORTHO05D004460 1.0e-60 236.9 147 73.5
HanXRQChr01g0024131 Helianthus annuus HOM05D003642 ORTHO05D004460 1.0e-60 236.9 147 71.4
ECA248G0168 Erigeron canadensis HOM05D003642 ORTHO05D002466 1.7e-60 236.1 145 72.4
ClCG02G022190 Citrullus lanatus HOM05D003642 ORTHO05D004460 2.2e-60 235.7 147 72.8
CDE06G1048 Ceratophyllum demersum HOM05D003642 ORTHO05D004460 2.9e-60 235.3 146 75.3
Glyma.12G088100 Glycine max HOM05D003642 ORTHO05D004460 2.9e-60 235.3 146 76.0
Sabra04G0123900 Salix brachista HOM05D003642 ORTHO05D004460 2.9e-60 235.3 147 74.1
Potri.009G144000 Populus trichocarpa HOM05D003642 ORTHO05D004460 5.0e-60 234.6 147 73.5
THA.LOC104826418 Tarenaya hassleriana HOM05D003642 ORTHO05D004460 5.0e-60 234.6 147 74.8
arahy.Tifrunner.gnm1.ann1.SR1X9W Arachis hypogaea HOM05D003642 ORTHO05D004460 6.5e-60 234.2 146 73.3
vmacro03309 Vaccinium macrocarpon HOM05D003642 ORTHO05D004460 6.5e-60 234.2 147 73.5
Sed0019020 Sechium edule HOM05D003642 ORTHO05D004460 1.1e-59 233.4 147 71.4
Gorai.004G009500 Gossypium raimondii HOM05D003642 ORTHO05D004460 2.5e-59 232.3 147 70.1
Rhsim13G0110400 Rhododendron simsii HOM05D003642 ORTHO05D004460 2.5e-59 232.3 147 72.1
Ah.08g215830 Amaranthus hybridus HOM05D003642 ORTHO05D004460 4.2e-59 231.5 147 72.8
EL10Ac7g15808 Beta vulgaris HOM05D003642 ORTHO05D004460 4.2e-59 231.5 147 73.5
THA.LOC104800538 Tarenaya hassleriana HOM05D003642 ORTHO05D004460 4.2e-59 231.5 147 72.1
Cfa010037 Carpinus fangiana HOM05D003642 ORTHO05D004460 7.2e-59 230.7 147 72.1
AUR62039222 Chenopodium quinoa HOM05D003642 ORTHO05D004460 7.2e-59 230.7 147 72.1
Haze_23398 Corylus avellana HOM05D003642 ORTHO05D004460 1.2e-58 229.9 144 72.9
HanXRQChr11g0346801 Helianthus annuus HOM05D003642 ORTHO05D004460 1.2e-58 229.9 147 71.4
DCAR_012184 Daucus carota HOM05D003642 ORTHO05D004460 2.1e-58 229.2 147 70.7
Dinv29465 Davidia involucrata HOM05D003642 ORTHO05D004460 2.1e-58 229.2 134 76.1
CiPaw.13G137400 Carya illinoinensis HOM05D003642 ORTHO05D004460 2.7e-58 228.8 143 73.4
SEGI_33073 Sequoiadendron giganteum HOM05D003642 ORTHO05D004460 1.0e-57 226.9 146 74.0
SalBow6G1534 Salvia bowleyana HOM05D003642 ORTHO05D004460 1.4e-57 226.5 148 70.3
TWI31G0358 Tripterygium wilfordii HOM05D003642 ORTHO05D004460 1.4e-57 226.5 147 69.4
AUR62009777 Chenopodium quinoa HOM05D003642 ORTHO05D004460 2.3e-57 225.7 144 71.5
Sabra09G0111700 Salix brachista HOM05D003642 ORTHO05D004460 3.9e-57 224.9 147 70.1
Sabra09G0114400 Salix brachista HOM05D003642 ORTHO05D004460 3.9e-57 224.9 147 70.1
Gohir.A08G004800 Gossypium hirsutum HOM05D003642 ORTHO05D004460 5.1e-57 224.6 147 68.7
HPP92_006804 Vanilla planifolia HOM05D003642 ORTHO05D004460 6.7e-57 224.2 148 68.9
HPP92_011490 Vanilla planifolia HOM05D003642 ORTHO05D004460 6.7e-57 224.2 148 70.3
Lsat_1_v5_gn_1_61681 Lactuca sativa HOM05D003642 ORTHO05D004460 1.1e-56 223.4 147 68.7
QL01p012516 Quercus lobata HOM05D003642 ORTHO05D004460 1.1e-56 223.4 142 71.8
unitig_0.g1479 Utricularia gibba HOM05D003642 ORTHO05D004460 3.3e-56 221.9 147 68.7
Actinidia24206 Actinidia chinensis HOM05D003642 ORTHO05D004460 7.4e-56 220.7 129 78.3
CDE02G0744 Ceratophyllum demersum HOM05D003642 ORTHO05D004460 1.3e-55 219.9 145 70.3
Eucgr.B03872 Eucalyptus grandis HOM05D003642 ORTHO05D004460 1.3e-55 219.9 147 69.4
Sc12g0004420 Simmondsia chinensis HOM05D003642 ORTHO05D004460 1.3e-55 219.9 147 67.3
Zm00001eb366950 Zea mays HOM05D003642 ORTHO05D004460 3.7e-55 218.4 152 67.1
MSTRG.18752 Avicennia marina HOM05D003642 ORTHO05D004460 4.8e-55 218.0 149 67.8
vmacro03308 Vaccinium macrocarpon HOM05D003642 ORTHO05D004460 4.8e-55 218.0 147 67.3
CSS0018533 Camellia sinensis var. sinensis HOM05D003642 ORTHO05D004460 6.3e-55 217.6 142 71.1
Zm00001eb147290 Zea mays HOM05D003642 ORTHO05D004460 8.2e-55 217.2 152 67.8
FvH4_3g24660 Fragaria vesca HOM05D003642 ORTHO05D004460 1.4e-54 216.5 128 78.1
FAN11G1888 Fragaria x ananassa HOM05D003642 ORTHO05D004460 1.4e-54 216.5 128 78.1
Lsat_1_v5_gn_6_40461 Lactuca sativa HOM05D003642 ORTHO05D004460 1.4e-54 216.5 147 66.7
PSO339G5820 Papaver somniferum HOM05D003642 ORTHO05D004460 1.4e-54 216.5 122 82.0
vmacro03307 Vaccinium macrocarpon HOM05D003642 ORTHO05D004460 1.2e-53 213.4 153 66.7
Glyma.12G088000 Glycine max HOM05D003642 ORTHO05D004460 2.0e-53 212.6 151 66.2
ECA233G1545 Erigeron canadensis HOM05D003642 ORTHO05D004460 1.3e-52 209.9 147 65.3
HPP92_025134 Vanilla planifolia HOM05D003642 ORTHO05D004460 2.2e-52 209.1 128 73.4
HPP92_026090 Vanilla planifolia HOM05D003642 ORTHO05D004460 2.2e-52 209.1 128 73.4
Os01g0858900 Oryza sativa ssp. japonica HOM05D003642 ORTHO05D004460 3.8e-52 208.4 152 64.5
arahy.Tifrunner.gnm1.ann1.H74NZW Arachis hypogaea HOM05D003642 ORTHO05D004460 6.5e-52 207.6 150 67.3
CSS0027733 Camellia sinensis var. sinensis HOM05D003642 ORTHO05D004460 6.5e-52 207.6 143 68.5
CSS0037628 Camellia sinensis var. sinensis HOM05D003642 ORTHO05D004460 6.5e-52 207.6 143 68.5
BraA06t23738Z Brassica rapa HOM05D003642 ORTHO05D004460 1.1e-51 206.8 148 64.2
HanXRQChr12g0364601 Helianthus annuus HOM05D003642 ORTHO05D004460 1.9e-51 206.1 147 65.3
Sp1g06910 Schrenkiella parvula HOM05D003642 ORTHO05D004460 1.9e-51 206.1 148 62.8
A06p05300 Brassica napus HOM05D003642 ORTHO05D004460 3.2e-51 205.3 148 63.5
BcaB07g34071 Brassica carinata HOM05D003642 ORTHO05D004460 9.4e-51 203.8 148 62.8
C05p06380 Brassica napus HOM05D003642 ORTHO05D004460 9.4e-51 203.8 148 62.8
CARHR008130 Cardamine hirsuta HOM05D003642 ORTHO05D004460 1.2e-50 203.4 148 63.5
Thhalv10007826m.g Eutrema salsugineum HOM05D003642 ORTHO05D004460 1.6e-50 203.0 148 63.5
AT1G08280 Arabidopsis thaliana HOM05D003642 ORTHO05D004460 2.1e-50 202.6 148 63.5
BolC5t29393H Brassica oleracea HOM05D003642 ORTHO05D004460 2.7e-50 202.2 148 62.2
TWI75G1212 Tripterygium wilfordii HOM05D003642 ORTHO05D004460 4.7e-50 201.4 147 64.6
AL1G18680 Arabidopsis lyrata HOM05D003642 ORTHO05D004460 6.1e-50 201.1 148 62.8
arahy.Tifrunner.gnm1.ann1.GDD8RQ Arachis hypogaea HOM05D003642 ORTHO05D004460 7.9e-50 200.7 147 64.6
Eucgr.B03871 Eucalyptus grandis HOM05D003642 ORTHO05D004460 1.4e-49 199.9 135 68.1
BcaB07g34070 Brassica carinata HOM05D003642 ORTHO05D004460 1.8e-49 199.5 148 61.5
arahy.Tifrunner.gnm1.ann1.52W323 Arachis hypogaea HOM05D003642 ORTHO05D004460 3.0e-49 198.7 141 66.0
Carub.0001s0763 Capsella rubella HOM05D003642 ORTHO05D004460 3.0e-49 198.7 148 61.5
unitig_746.g26606 Utricularia gibba HOM05D003642 ORTHO05D004460 1.5e-48 196.4 145 62.8
Rhsim13G0110200 Rhododendron simsii HOM05D003642 ORTHO05D004460 2.0e-48 196.1 151 61.6
Zm00001eb077930 Zea mays HOM05D003642 ORTHO05D004460 3.7e-47 191.8 147 59.2
SMO145G0137 Selaginella moellendorffii HOM05D003642 ORTHO05D004460 3.1e-46 188.7 145 58.6
Zm00001eb426190 Zea mays HOM05D003642 ORTHO05D004460 7.0e-46 187.6 152 58.6
Zm00001eb196980 Zea mays HOM05D003642 ORTHO05D004460 9.1e-46 187.2 151 57.6
Os04g0506800 Oryza sativa ssp. japonica HOM05D003642 ORTHO05D004460 1.2e-45 186.8 160 56.2
Os12g0151500 Oryza sativa ssp. japonica HOM05D003642 ORTHO05D004460 2.6e-45 185.7 151 58.9
Mapoly0005s0249 Marchantia polymorpha HOM05D003642 ORTHO05D004460 5.0e-44 181.4 148 61.5
unitig_899.g15371 Utricularia gibba HOM05D003642 ORTHO05D004460 2.7e-42 175.6 145 57.2
Mapoly0001s0264 Marchantia polymorpha HOM05D003642 ORTHO05D004460 6.1e-42 174.5 148 56.8
Gohir.D08G015066 Gossypium hirsutum HOM05D003642 ORTHO05D004460 1.5e-40 169.9 108 69.4
SMO331G0026 Selaginella moellendorffii HOM05D003642 ORTHO05D004460 1.4e-38 163.3 154 55.2
AagrBONN_evm.TU.Sc2ySwM_228.2668 Anthoceros agrestis HOM05D003642 ORTHO05D004460 4.1e-38 161.8 146 54.8
CDE06G0775 Ceratophyllum demersum HOM05D003642 ORTHO05D004460 7.7e-37 157.5 99 74.7
Zm00001eb092710 Zea mays HOM05D003642 ORTHO05D004460 5.0e-36 154.8 153 49.7
Cpa.g.sc32.97 Carica papaya HOM05D003642 ORTHO05D004460 1.2e-34 150.2 98 70.4
CiPaw.14G101500 Carya illinoinensis HOM05D003642 ORTHO05D004460 1.6e-34 149.8 141 53.9
Lj1A242T18 Lonicera japonica HOM05D003642 ORTHO05D004460 4.7e-34 148.3 100 71.0
Pp3c14_26500 Physcomitrium patens HOM05D003642 ORTHO05D004460 1.7e-31 139.8 147 51.7
Mapoly0032s0065 Marchantia polymorpha HOM05D003642 ORTHO05D004460 3.5e-29 132.1 158 42.4
Lj2C980T3 Lonicera japonica HOM05D003642 ORTHO05D004460 4.2e-27 125.2 74 79.7
Mapoly0028s0144 Marchantia polymorpha HOM05D003642 ORTHO05D004460 9.4e-27 124.0 160 41.2
GSVIVG01036150001 Vitis vinifera HOM05D003642 ORTHO05D004460 9.4e-27 124.0 131 51.9
CAN.G225.12 Capsicum annuum HOM05D003642 ORTHO05D004460 5.7e-24 114.8 82 64.6
CDE08G1668 Ceratophyllum demersum HOM05D003642 ORTHO05D003759 2.3e-20 102.8 119 47.9
unitig_899.g15372 Utricularia gibba HOM05D003642 ORTHO05D004460 9.8e-16 87.4 71 57.7
Lalb_Chr19g0136571 Lupinus albus HOM05D003642 ORTHO05D004460 2.7e-13 79.3 46 76.1
Pp3c6_3550 Physcomitrium patens HOM05D003642 ORTHO05D004460 3.8e-12 75.5 75 49.3
CBR_g16841 Chara braunii HOM05D003642 ORTHO05D004460 1.8e-09 66.6 128 33.6


User provided reference genes

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